ID AJ580953; SV 1; linear; genomic RNA; STD; VRL; 3366 BP. XX AC AJ580953; XX DT 30-AUG-2003 (Rel. 77, Created) DT 28-JUL-2004 (Rel. 80, Last updated, Version 2) XX DE Cucumber mosaic virus 1a gene, genomic RNA, strain Ns XX KW 1a gene. XX OS Cucumber mosaic virus (cucumber mosaic cucumovirus) OC Viruses; Riboviria; Bromoviridae; Cucumovirus. XX RN [1] RP 1-3366 RA Diveki Z.; RT ; RL Submitted (24-AUG-2003) to the INSDC. RL Diveki Z., Environmental Biosafety Res. Inst., Agricultural Biotechnology RL Center, P.O.Box 411, Godollo, H-2101, HUNGARY. XX RN [2] RX PUBMED; 15305604. RA Diveki Z., Salanki K., Balazs E.; RT "The necrotic pathotype of the cucumber mosaic virus (CMV) ns strain is RT solely determined by amino acid 461 of the 1a protein"; RL Mol. Plant Microbe Interact. 17(8):837-845(2004). XX DR MD5; 4355aaa69fe85fe399a5456ad1dddeb1. DR RFAM; RF01084; TLS-PK3. XX FH Key Location/Qualifiers FH FT source 1..3366 FT /organism="Cucumber mosaic virus" FT /strain="Ns" FT /mol_type="genomic RNA" FT /country="Hungary" FT /isolation_source="Nicotiana glutinosa" FT /db_xref="taxon:12305" FT CDS 96..3077 FT /gene="1a" FT /product="1a protein" FT /function="putative RNA helicase and methyltransferase" FT /db_xref="GOA:Q70HV8" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR021002" FT /db_xref="InterPro:IPR022184" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:Q70HV8" FT /protein_id="CAE45702.1" FT /translation="MATSSFNINELVASHGDKGLLATALVDKTAHEQLEEQLQHQRRGR FT KVYVRNVLSVKDSEVIRNRYGGKYDLHLTQQEFAPHGLAGALRLCETLDCLDSFPSSGL FT RQDLVLDFGGSWVTHYLRGHNVHCCSPCLGIRDKMRHTERLMNMRKIILNDPQQFDGRQ FT PDFCTHPAADCKVQAHFAISIHGGYDMGFRGLCEAMNAHGTTILKGTMMFDGAMMFDDQ FT GIIPELNCQWRKIKNAFSETEDVTPLVGKLNSTVFSRVRKFKTLVAFDFINESTMSYVH FT DWENIKSFLTDQTYSYKGMTYGIERCVINAGIMTYKIIGVPGMCPPELIRHCIWFPSIK FT DYVGLKIPASQDLVEWKTVRILTSTLRETEEIAMRCYNDKKAWMEQFKVILGVLSAKSS FT TIVINGMSMQSGERIDINDYHYIGFAILLHTKMKYEQLGKMYDMWNASTISKWFAAFTR FT PLCQFFSSAVRALFPTLRPREEKEFLIKLSTFVTFNEECSFDGGEEWDVISSAAYVATQ FT AVTDGKVLATQKAEKLAEKLAQPVDEVSDSPEVPSSTPDDTADVCGKEQEVSELDSLSA FT QTRSPITRVAERATAMLEYAAYEKQLHDTTVSNLKRIWNMAGGDDKRNSLEGNLKFVFD FT TYFTVDPMVNIHFSTGRWMRPVPEGIVYSVGYNERGLGPKSDGELFIVNSECVIRNSES FT LSAVTRSLQAPTGTISQVDGVAGCGKTTAIKSIFEPSTDMIVTANKKSAQDVRMALFKS FT SDSKEACAFVRTADSVLLNECPNVSRVLVDEVVLLHFGQLCAVMSKLKAVRAICFGDSE FT QIAFSSRDASFDMRFSKIIPDETSDADTTFRSPQDVVPLVRLMATKALPKGTHSKYTKW FT VSQSKVKRSVTSRSIASVTLVDLDSSRFYITMTQADKASLISRAKEMNLPKTFWDERIK FT TVHESQGISEDHVTLVRLKSTKCDLFKQFSYCLVALTRHKVTFRYEHCGVLNGDLIAEC FT IARA" XX SQ Sequence 3366 BP; 856 A; 748 C; 803 G; 959 T; 0 other; gtttatttac aagagcgtac ggttcaaccc ctgcctcccc tgtaaaacta ccctttgaaa 60 acctctcttt cttaatcttt tctttgtaaa ttcctatggc gacgtcctcg ttcaacatca 120 atgaattggt agcctcccac ggcgataaag gactactcgc gaccgccctc gttgataaga 180 cagctcatga acagctcgag gagcaattac agcatcaacg tagaggccgt aaggtctacg 240 ttcggaacgt tctgagcgta aaggattccg aagtcattcg gaatcggtat ggagggaagt 300 acgacctcca tcttacccag caggagtttg ctccccacgg cctagctggt gccctccgct 360 tgtgtgaaac tctcgattgt ctagactctt tcccttcttc aggtctgcgg caggacctcg 420 tcttagactt cggaggaagt tgggtcacac attacctccg cggacacaac gtacactgct 480 gttccccttg tttgggtatt cgtgataaaa tgcgccacac ggaacgttta atgaacatgc 540 gcaagatcat cttgaacgat ccacaacagt tcgatggtcg acagccggac ttctgcactc 600 atcctgctgc tgattgcaaa gtacaagccc actttgctat atctattcat ggaggttatg 660 atatgggctt tagaggatta tgtgaagcaa tgaatgctca cggaaccacc attttgaagg 720 gaacgatgat gttcgatggt gcgatgatgt ttgacgacca aggtataatt cccgaactta 780 attgccagtg gaggaagatt aagaacgctt tctccgaaac tgaagacgtc acaccgttag 840 ttggtaaact taattccaca gtgttttccc gcgtacgtaa attcaagact ttggtagctt 900 tcgatttcat taacgaatct actatgtctt atgttcatga ttgggagaac ataaaatctt 960 ttctaacgga ccagacttat tcctacaaag gaatgaccta cggtattgag cgttgtgtca 1020 tcaatgctgg tattatgacg tacaagatta tcggagtgcc tgggatgtgt ccacccgaac 1080 tcattcgaca ttgcatttgg ttcccctcta ttaaagacta tgttggtcta aagattcccg 1140 cgtcgcagga tctggttgag tggaaaacag tgcgtatttt aacgtcaaca ttgcgtgaaa 1200 ctgaagagat tgctatgagg tgctacaatg ataagaaggc gtggatggaa caatttaagg 1260 ttatcttagg tgttctatct gctaaatcat ctaccattgt tatcaatggt atgtccatgc 1320 aatctggcga acggatagac atcaatgatt atcattacat tgggttcgct atccttcttc 1380 acacaaaaat gaaatatgag cagctaggaa aaatgtatga tatgtggaat gcttcgacta 1440 tttcgaagtg gtttgcagca tttactcgtc cgctgtgtca gtttttctct agtgctgttc 1500 gtgcgctgtt cccgactttg agaccccgtg aggaaaaaga attcctgatt aaactctcca 1560 ccttcgtaac ttttaatgaa gagtgctcat ttgatggtgg agaggaatgg gacgtgatat 1620 catctgctgc atacgttgct acacaggctg ttactgatgg gaaagttttg gctacgcaga 1680 aagccgagaa gctcgctgag aagcttgcac aacccgtaga tgaggtatca gacagccctg 1740 aggtgccatc ttcaacaccc gatgatactg ccgatgtttg tggaaaggag caagaagttt 1800 cggaacttga ctcactgtcg gctcagacac gttcccccat cactagagtt gctgaaaggg 1860 ctactgccat gctggagtat gccgcctatg agaaacagct acatgatacc acggtgtcca 1920 atttgaaacg tatttggaat atggcgggcg gtgatgacaa gagaaattcc ctcgagggta 1980 acttgaagtt cgtttttgac acgtatttta ccgttgatcc tatggtgaac attcactttt 2040 cgacgggtcg atggatgcgt cctgtgcctg agggaattgt ctactctgtt ggttataatg 2100 aacgcggttt aggtccgaag tctgatgggg agcttttcat tgtcaatagt gagtgcgtga 2160 tacgtaatag cgagtcttta tctgctgtca cgcgctctct tcaagccccg actggaacca 2220 ttagtcaagt tgacggagtc gctggttgcg ggaaaaccac ggcaattaaa tccatttttg 2280 agccgtccac tgacatgatc gttaccgcga ataagaagtc cgctcaagat gtgcgcatgg 2340 cacttttcaa atcatcagac tctaaggaag catgcgcctt cgttcgaaca gccgattccg 2400 tcctacttaa tgaatgtccg aatgtgagta gggttttggt tgatgaggtt gtattgctac 2460 actttggtca gctgtgtgct gtcatgtcta aactgaaggc tgtgcgagct atatgttttg 2520 gggattcgga gcagattgct ttttcttctc gagatgcctc gtttgacatg cgtttctcta 2580 agattattcc tgatgaaact agtgatgcgg acaccacgtt ccgtagtcca caagacgtcg 2640 tgccgcttgt gcgtttaatg gctacgaagg ccctcccgaa aggaacccat tcaaaataca 2700 cgaaatgggt ttctcaatct aaagtgaaga gatctgtcac ctcccgttct attgctagtg 2760 tgacattagt cgacctggac tcttctaggt tttacatcac gatgactcaa gctgataaag 2820 cttcactgat ttcaagggcg aaagagatga acttaccaaa gaccttttgg gacgaaagga 2880 ttaaaaccgt gcatgaatct caaggtattt ctgaagatca cgttactttg gtaagattaa 2940 agagcacaaa gtgtgacttg ttcaaacagt tttcttactg tcttgttgct ctaactagac 3000 acaaggtcac cttccgctac gagcactgtg gtgtattgaa cggcgacttg atcgccgaat 3060 gtattgctcg tgcttagcgg tatccctcct tcgggcggga tctgagttgg cggtaatcta 3120 taaaccgtct gaggtcacta aacgttaacg gttacgttta cggtgaacgg gttgtccatc 3180 cagcttacgg ctaaaatggt cagtcgtgga gaaatccacg ccagtagact tacaagtctc 3240 tgaggcgcct ttgaaaccat ctcctaggtt tcttcggaag gacttctgtc cgtgtacttc 3300 tagcacaatg tgctagttca gggtacgggt gccccccact ttcgtggggc ctccaaaagg 3360 agacca 3366 //