ID   AJ580095; SV 1; linear; genomic RNA; STD; VRL; 1777 BP.
XX
AC   AJ580095;
XX
DT   28-SEP-2006 (Rel. 89, Created)
DT   20-FEB-2007 (Rel. 90, Last updated, Version 2)
XX
DE   Amaranthus leaf mottle virus partial gene for polyprotein, genomic RNA,
DE   isolate I
XX
KW   capsid protein; nuclear inclusion b protein; polyprotein.
XX
OS   Amaranthus leaf mottle virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1777
RA   Segundo E.;
RT   ;
RL   Submitted (07-AUG-2003) to the INSDC.
RL   Segundo E., Unidad de Virologia, CIFA Almeria, El Ejido PO Box 91, Almeria,
RL   E-04700, SPAIN.
XX
RN   [2]
RX   DOI; 10.1007/s10658-006-9064-x.
RX   AGRICOLA; IND43860969.
RA   Segundo E., Lesemann D.E., Martin G., Carmona M.P., Ruiz L., Cuadrado I.M.,
RA   Velasco L., Janssen D.;
RT   "Amaranthus leaf mottle virus: 3'-end RNA sequence proves classification as
RT   distinct virus and reveals affinities within the genus Potyvirus";
RL   Eur. J. Plant Pathol. 117(1):81-87(2007).
XX
DR   MD5; 33161fdbb6365388f8ba22daa7199938.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1777
FT                   /organism="Amaranthus leaf mottle virus"
FT                   /host="Amaranthus deflexus"
FT                   /isolate="I"
FT                   /mol_type="genomic RNA"
FT                   /country="Italy"
FT                   /db_xref="taxon:241651"
FT   CDS             <1..1464
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q08I81"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:Q08I81"
FT                   /protein_id="CAE30474.1"
FT                   /translation="STVVDNSLMVVLAMHYAFVKENLPYDEVENFIKFYVNGDDLIIAV
FT                   HPSKENVLDRLASHFSSLGLNYDFTSRTRDKSELWFMSHRGIEIEGMYVPKLEEERIVS
FT                   ILQWDRATKPEYRLEAVCAAMIEAWGYPHLIHQIRKFYSWLIEQHPFSELAAEGKAPYI
FT                   AEMALRRLYLDRAVENSELQDFMKYFTDLDDDIECEQYEVHHQAGEEFDATQAGGNTQK
FT                   PKKNVASPQQEDRGNGAGSSGGNQQIVSDRDVNAATKGTHMVPRIKTITSKMNFPKANK
FT                   KNALNLDHLLEYKPRQIDLSNTRATQMQFDTWFNAVQAAYELEENQMSTVMNGLMVWCI
FT                   ENGTSPNINGVWVMMDGEEQVEYPLKPVIENAKPTFRQIMAHFSDVAEAYIEMRNKTEP
FT                   YMPRYGLVRNLRDMSLARYAFDFYEMTSRTSTRAREAHIQMKAAALKSSQSRLFGLDGG
FT                   ISTQEENTERHTTEDVNPNMHTLLGVRNM"
FT   mat_peptide     <1..618
FT                   /product="nuclear inclusion b protein"
FT   mat_peptide     619..1461
FT                   /product="capsid protein"
FT   3'UTR           1465..1777
XX
SQ   Sequence 1777 BP; 552 A; 335 C; 413 G; 477 T; 0 other;
     tcgactgttg tggataactc actcatggtt gtgctcgcta tgcattatgc gtttgtcaag        60
     gaaaacttgc catatgacga agtggagaat ttcataaagt tctacgtcaa tggggatgat       120
     ttaataatcg cagtgcatcc atcgaaagag aatgttctag acaggcttgc cagccatttc       180
     tctagtctcg gtctcaacta tgattttaca tctagaacaa gagacaagag tgaattgtgg       240
     ttcatgtctc acagaggcat tgagatcgaa ggtatgtatg ttccaaagct ggaagaagaa       300
     agaattgttt ccatcttaca atgggacaga gcaactaagc cagagtatcg gcttgaagcg       360
     gtttgtgctg caatgataga agcatggggt tatcctcatt taattcatca gattcgcaag       420
     ttttactcat ggctaatcga acagcaccct ttttctgaat tagctgcaga aggaaaagca       480
     ccatatattg ctgagatggc gttgcgccgc ttatacttag atcgagcagt tgaaaattca       540
     gagttacaag attttatgaa gtacttcact gatctagacg acgacataga atgtgaacaa       600
     tatgaagtac atcatcaagc tggcgaagaa ttcgatgcaa cgcaagcagg tggtaacaca       660
     cagaaaccta agaagaatgt tgcaagccca cagcaagagg acagagggaa tggagcagga       720
     agttcagggg gtaatcagca gatcgtttcc gatcgtgatg tcaacgcagc aactaaggga       780
     actcatatgg ttccgagaat taaaacaatc acttctaaaa tgaattttcc aaaagccaac       840
     aagaagaatg ctctcaattt ggatcatttg ttagaatata aaccgcgcca aatcgatcta       900
     tccaacacga gagcaacgca gatgcaattt gacacctggt ttaatgccgt gcaggctgcg       960
     tatgaacttg aagagaatca aatgtcaact gtgatgaacg gactaatggt ctggtgtatc      1020
     gaaaatggaa cctcgccaaa cattaacggt gtatgggtta tgatggatgg ggaagagcaa      1080
     gtcgaatacc ccttgaaacc tgtcatcgaa aatgcgaaac cgacctttag acaaataatg      1140
     gcacatttct ccgatgtagc ggaagcgtat atagaaatgc gcaacaagac agaaccatat      1200
     atgccacgat atggtttagt gaggaattta cgagatatga gtttggcgcg ctacgccttt      1260
     gatttctatg agatgacctc acggacttca acaagagcgc gggaagcgca cattcagatg      1320
     aaagcagctg cacttaaatc atcacaatca cggctgtttg gtttggacgg tggcatcagt      1380
     acacaagagg aaaacacaga aaggcacacc accgaagatg ttaaccctaa catgcataca      1440
     ctgcttgggg tcaggaacat gtgagtgttt gcctactggg atgaaaaata agtatatatc      1500
     gtatgcaata tatattttgg cttttcctgt actactttta ctacgacttt gcaatgttta      1560
     gtcttaaaaa cgccaacttg aggtgaccac ttgattctgt catgtgggtg actcatgttt      1620
     gtgtttctag taataggagg tggccagtag attccgtcta ctgggtgact catatttctt      1680
     tacttacttg ctttagttta tgtaaaagtt ttctaataca tagcgagagt gatgttgcga      1740
     ttctgtcgta gcagtggtcc aagctatcta ttggaag                               1777
//