ID   AJ579358; SV 1; circular; genomic DNA; STD; VRL; 1360 BP.
XX
AC   AJ579358;
XX
DT   30-JUL-2003 (Rel. 76, Created)
DT   30-JUL-2003 (Rel. 76, Last updated, Version 1)
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DE   Tomato yellow leaf curl China virus associated DNA 1 rep gene for
DE   replication-associated protein
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KW   rep gene; replication-associated protein.
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OS   Tomato yellow leaf curl China alphasatellite
OC   Viruses; Alphasatellitidae; Geminialphasatellitinae; Colecusatellite.
XX
RN   [1]
RP   1-1360
RA   Zhou X.;
RT   ;
RL   Submitted (29-JUL-2003) to the INSDC.
RL   Zhou X., Institute of Biotechnology, Zhejiang University, No.268, Kaixuan
RL   Road, Hangzhou, 310029, CHINA.
XX
RN   [2]
RA   Wu P., Xie Y., Zhou X.;
RT   "Genomic variation of nanovirus-like DNA molecules associated with their
RT   begomoviruses";
RL   Unpublished.
XX
DR   MD5; 21b44c3e91777106b7854e62fe9e0a1b.
DR   EuropePMC; PMC2922188; 20678232.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1360
FT                   /organism="Tomato yellow leaf curl China alphasatellite"
FT                   /isolate="Y89"
FT                   /mol_type="genomic DNA"
FT                   /country="China:Yunnan"
FT                   /isolation_source="tomato"
FT                   /db_xref="taxon:240557"
FT   CDS             70..1017
FT                   /gene="rep"
FT                   /product="replication-associated protein"
FT                   /function="initiation of rolling circle replication"
FT                   /db_xref="GOA:Q7T7L6"
FT                   /db_xref="InterPro:IPR000605"
FT                   /db_xref="InterPro:IPR003365"
FT                   /db_xref="UniProtKB/TrEMBL:Q7T7L6"
FT                   /protein_id="CAE18134.1"
FT                   /translation="MPCVQSQWWCFTVFFLSTTAPDLVPVFENTHVSYACWQEEESPTT
FT                   NRRHLQGYLQLKGKRSFNQVKSIFGGLNPHLEKQRARKTDEACDYCMKEETRVSGPFEF
FT                   GDYCPSGSHKRRQRESVIRSPVRMAEENPSVFRRVKAKLAEEEFQKTAPEIQISNLKSW
FT                   QLRLWTLLGRDPDDRTIFWVYGPSGGEGKSTFARDLYRSGNWFYTRGGSGDNVSYQYIG
FT                   CLGNNIVFDIPRDKKDYLQYSLIEMFKDRLIVSNKYEPLMAPLVNCIHVVVMSNFLPDF
FT                   EKISNDRVHVIPCIPCGACLKHHITEIKCDEYFD"
XX
SQ   Sequence 1360 BP; 407 A; 237 C; 319 G; 397 T; 0 other;
     accccgcctc gtctccctca gctaggatcc ctcgtgcaat ccgcgtgcgt tttcctctct        60
     gttataaata tgccttgtgt ccaatctcag tggtggtgtt tcaccgtctt ctttctatca       120
     accaccgcac cagatctagt tcctgtgttt gagaacaccc acgttagtta cgcctgctgg       180
     caggaagagg agtctccgac gacgaaccgc cgccatctgc agggttatct gcaattgaag       240
     ggtaaacgta gttttaatca ggtcaaatct atatttggtg gtttgaatcc ccatctggaa       300
     aaacagcgag ctcgtaagac agacgaagct tgcgactatt gtatgaaaga ggaaactagg       360
     gtttctggtc catttgaatt tggggattat tgccctagtg gttctcataa gagaagacaa       420
     agggaaagtg taattcgatc cccggtaagg atggccgaag aaaatccgtc tgttttccgg       480
     cgagtaaagg caaagcttgc tgaggaagaa ttccagaaga ccgctcctga aattcaaatt       540
     tcaaatttga aatcttggca actgcgcctg tggacgctcc ttggtaggga cccagatgac       600
     cgcactattt tctgggtata tggacccagt ggtggtgaag gcaaatccac gtttgcaaga       660
     gacctgtaca gaagtggtaa ttggttctat acacgtggag gttctgggga taatgtttcc       720
     tatcagtaca taggttgttt aggcaataat attgtttttg atatccctcg tgataagaag       780
     gattatcttc aatatagttt aattgaaatg tttaaggata ggttaattgt tagtaacaag       840
     tatgagcccc ttatggcccc acttgttaat tgtattcatg tagttgttat gtctaatttt       900
     ctccctgatt ttgagaagat tagtaatgat agggtccatg taattccttg tattccttgt       960
     ggtgcttgtc ttaagcatca catcactgaa ataaaatgcg acgagtattt tgactaaata      1020
     cgagtattag tatccgtata attttgcttc tttaaaaaaa gaaggaatga aatgaaaaaa      1080
     ataataaaac atgtgcagaa cattaatatc ttgaagaaca gaaggccccg caggggcaat      1140
     gttcctgaaa ttggtagaga aaggaaaaaa agaaaaaaag aaaataaatt taaaaggttt      1200
     taataaaacg acgacgtttt ggtaggtttg acgaagtcaa agaaaagtag ggactaaatt      1260
     tgtaaattga gggacttatg tgtaaatttt gaaagataag gggctgcgtt gaaagtccgt      1320
     acgggaacct gggatatata tacgaggcgg gtgtagtatt                            1360
//