ID   AJ579357; SV 1; circular; genomic DNA; STD; VRL; 1367 BP.
XX
AC   AJ579357;
XX
DT   30-JUL-2003 (Rel. 76, Created)
DT   30-JUL-2003 (Rel. 76, Last updated, Version 1)
XX
DE   Tomato yellow leaf curl China virus associated DNA 1 rep gene for
DE   replication-associated protein
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KW   rep gene; replication-associated protein.
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OS   Tomato yellow leaf curl China alphasatellite
OC   Viruses; Alphasatellitidae; Geminialphasatellitinae; Colecusatellite.
XX
RN   [1]
RP   1-1367
RA   Zhou X.;
RT   ;
RL   Submitted (29-JUL-2003) to the INSDC.
RL   Zhou X., Institute of Biotechnology, Zhejiang University, No.268, Kaixuan
RL   Road, Hangzhou, 310029, CHINA.
XX
RN   [2]
RA   Wu P., Xie Y., Zhou X.;
RT   "Genomic variation of nanovirus-like DNA molecules associated with their
RT   begomoviruses";
RL   Unpublished.
XX
DR   MD5; 6d7287ab3b85333ce9ca7b16b4320b95.
DR   EuropePMC; PMC2922188; 20678232.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1367
FT                   /organism="Tomato yellow leaf curl China alphasatellite"
FT                   /isolate="Y87"
FT                   /mol_type="genomic DNA"
FT                   /country="China:Yunnan"
FT                   /isolation_source="tomato"
FT                   /db_xref="taxon:240557"
FT   CDS             69..1016
FT                   /gene="rep"
FT                   /product="replication-associated protein"
FT                   /function="initiation of rolling circle replication"
FT                   /db_xref="GOA:Q7T7L7"
FT                   /db_xref="InterPro:IPR000605"
FT                   /db_xref="InterPro:IPR003365"
FT                   /db_xref="UniProtKB/TrEMBL:Q7T7L7"
FT                   /protein_id="CAE18133.1"
FT                   /translation="MPSITSVFWCFTIFFASSSAPDLVPVFENTHVSYACWQEEESPTT
FT                   RRRHLQGYLQLKGKRTLNQVKAIFGDLKPHLEKQRARKTDEACDYCMKEETRVSGPFEF
FT                   GDYCPSGSHKRRQRESVIRSPVRMAEENPSVFRRVKAKLAEEEFQGTVAEIQISNLKSW
FT                   QLRLKTLLDRAPDDRTIFWVYGPTGGEGKSTFARDLYRSGSWFYTRGGSADNVSYQYIG
FT                   CLGNNIVFDIPRDKKDYLQYSLIEMFRDRLIVSNKYEPLMAPLVNCIHVLVMSNFLPDF
FT                   EKISSDRVHVIPCIPCGVCLKHHIGEIKCDEYLD"
XX
SQ   Sequence 1367 BP; 405 A; 259 C; 309 G; 394 T; 0 other;
     acccagcctc ggcacccgct ccttggaacc ctcgtgcctt ccgcgtgctc tctctcttct        60
     acacagaaat gccttcaatt acctctgtct tctggtgttt caccatcttc ttcgcttcct       120
     cctctgctcc cgacctcgtt cccgtgtttg agaacactca cgttagttac gcctgctggc       180
     aagaggaaga gtctcccacg actcgacgtc gccacctgca ggggtatctc caattgaagg       240
     gtaagaggac tctgaaccag gtgaaggcta tatttgggga tctgaaaccc catcttgaga       300
     aacagcgagc tcgtaagaca gacgaagctt gcgactattg tatgaaagag gaaactaggg       360
     tttccggtcc ctttgaattt ggggattatt gccctagtgg ttctcataaa cgccggcaaa       420
     gggaaagtgt aattcgaagt ccggtgagaa tggctgaaga aaatccgtcc gttttccgac       480
     gagtcaaggc taagcttgcg gaggaagaat tccagggtac tgtagctgaa attcaaattt       540
     caaatttgaa atcttggcaa ctgcgcctga agacgctcct cgacagggcc ccagatgacc       600
     gcactatctt ctgggtttat ggtcccactg gtggggaagg aaaatcaacc tttgccagag       660
     atctgtacag aagtgggtcc tggttttata cacgtggagg atctgctgat aatgttagtt       720
     atcagtatat aggatgctta ggaaataata ttgtatttga tatccctcgt gataagaagg       780
     attatcttca atacagttta atagagatgt ttagggatag gttaatagtt agtaataagt       840
     atgagccttt aatggcccct ttagttaatt gtattcatgt tttagttatg tctaattttc       900
     tccctgattt tgagaagatt agtagtgata gagtccatgt aatcccttgt attccttgtg       960
     gtgtttgtct taagcatcat attggtgaaa taaaatgcga cgagtatttg gactaaatac      1020
     gagtataaat acgttaattt tgcttcttta aaaaaagaag gaatgaaatg aaaaaaaaat      1080
     aaacatacaa gcccagtaat acaattcaat tgagaaaacc cggcccgcag gggcaatgtc      1140
     tttgatgcag gcccaaataa ataaaactaa cttgaataaa gaaaagggaa aaaaaataat      1200
     taaagtgtta taaaaacgac gtcgtatgag taagtgggtg attttttgta aattctaaaa      1260
     gttagaggga ctaaaagtgt caatatgaag gttcttaggt ccttatgaat gcaattatta      1320
     gggttcctag gatataaata acacgtcacc gaggctggta tagtatt                    1367
//