ID   AJ579356; SV 1; circular; genomic DNA; STD; VRL; 1365 BP.
XX
AC   AJ579356;
XX
DT   30-JUL-2003 (Rel. 76, Created)
DT   30-JUL-2003 (Rel. 76, Last updated, Version 1)
XX
DE   Tomato yellow leaf curl China virus associated DNA 1 rep gene for
DE   replication-associated protein
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KW   rep gene; replication-associated protein.
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OS   Tomato yellow leaf curl China alphasatellite
OC   Viruses; Alphasatellitidae; Geminialphasatellitinae; Colecusatellite.
XX
RN   [1]
RP   1-1365
RA   Zhou X.;
RT   ;
RL   Submitted (29-JUL-2003) to the INSDC.
RL   Zhou X., Institute of Biotechnology, Zhejiang University, No.268, Kaixuan
RL   Road, Hangzhou, 310029, CHINA.
XX
RN   [2]
RA   Wu P., Xie Y., Zhou X.;
RT   "Genomic variation of nanovirus-like DNA molecules associated with their
RT   begomoviruses";
RL   Unpublished.
XX
DR   MD5; 2c1c5a128ca0b919e261fd876824613d.
DR   EuropePMC; PMC2922188; 20678232.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1365
FT                   /organism="Tomato yellow leaf curl China alphasatellite"
FT                   /isolate="Y39"
FT                   /mol_type="genomic DNA"
FT                   /country="China:Yunnan"
FT                   /isolation_source="tomato"
FT                   /db_xref="taxon:240557"
FT   CDS             87..1034
FT                   /gene="rep"
FT                   /product="replication-associated protein"
FT                   /function="initiation of rolling circle replication"
FT                   /db_xref="GOA:Q7T7L8"
FT                   /db_xref="InterPro:IPR000605"
FT                   /db_xref="InterPro:IPR003365"
FT                   /db_xref="UniProtKB/TrEMBL:Q7T7L8"
FT                   /protein_id="CAE18132.1"
FT                   /translation="MPCVQSQWWCFTVFFLTATAPDLVPLLENTHVSYACWQEEESPTT
FT                   KRRHLQGYLQLKGKRSLNQVNALFGDLKPHLEKQRARKTDEACDYCMKEETRVSGPFEF
FT                   GDYCPSGSHRRRQRESVIRSPVRMSEENPSVFRRVKAKIAEEEFQATVAEIQISNLKSW
FT                   QLRLRTLLDRAPDDRTIFWVYGPTGGEGKSTFARDLYRTGSWFYTRGGSADNVSYQYIG
FT                   CLGNNIVFDIPRDKKDYLQYSLIEMFKDRLIVSNKYEPLMAPLVNCIHVVVMSNFLPDF
FT                   DKISSDRVHVIPCIPCGACLKHHITEIKCNEYLD"
XX
SQ   Sequence 1365 BP; 398 A; 241 C; 320 G; 406 T; 0 other;
     acccagcctc ggttccctct ccttggttcc ctcgtgcttt gcgcgtgctc tctctcttct        60
     gtgttctttt ataaaaaaaa ttgaaaatgc cttgcgttca atctcagtgg tggtgtttca       120
     cggtgttctt cctaactgca actgcaccgg acttggtgcc gttgctggag aacacccacg       180
     tttcctatgc ctgctggcag gaggaggaat cgccgacgac gaaacgtcgt catctccagg       240
     gctatctgca attgaagggt aaacgtagtt tgaaccaggt gaatgcccta tttggggatc       300
     taaaacccca tttggagaaa cagcgagctc gtaagacaga cgaagcttgc gactattgta       360
     tgaaagagga aactagggtt tccggtccct ttgaatttgg ggattattgc cctagtggtt       420
     ctcatagacg ccggcaaagg gaaagtgtaa ttcggagtcc ggtaaggatg tctgaagaaa       480
     atccgtctgt tttccggcga gtaaaggcaa agattgcgga ggaagaattc caggctactg       540
     tagctgaaat tcaaatttca aatttgaaat cttggcaact gcgcctgagg acgctcctcg       600
     acagggcccc agatgaccgc actatcttct gggtttatgg tcccactggt ggtgaaggca       660
     aatcaacgtt tgccagagat ctgtatagaa ctgggtcttg gttttataca cgtggcggtt       720
     ctgcagataa tgttagttat cagtatatag gttgtttagg aaataatatt gtatttgata       780
     tccctcgtga taagaaggat tatcttcagt atagtttaat tgagatgttt aaggataggt       840
     taattgttag taacaagtat gagcctctga tggccccact tgttaattgt attcatgttg       900
     tagttatgtc taattttctt cctgattttg ataagattag cagtgatagg gtccatgtaa       960
     ttccttgtat tccgtgtggt gcttgtctta agcaccacat tactgaaata aaatgcaacg      1020
     agtatttgga ctaaatacga gtataaaata cgtatatttt gcttctttaa aaaaagaagg      1080
     aatgaaatga aaaaaataaa taagaacaca tctgcagaaa tataattaca ttgaagaaag      1140
     taggccccgc aggggcattg ttttgaaaaa agctgaatag aataaaaata aaaaggaaaa      1200
     agaaattaaa tgggtttatt aaaacgtcat cgttttggaa tgtttgactt ggtcaaaata      1260
     agtgagtgac taaaagtgta aatatgcggg atcttaggtc cttccaatgc aattattcgg      1320
     gatcctagga tataaataac acgtcaccga ggctggtgta gtatt                      1365
//