ID AJ579308; SV 1; circular; genomic DNA; STD; VRL; 2738 BP. XX AC AJ579308; XX DT 01-AUG-2003 (Rel. 76, Created) DT 07-MAR-2015 (Rel. 124, Last updated, Version 9) XX DE Sri Lankan cassava mosaic virus - [Ker20] segment B, isolate Adivaram XX KW BC1 gene; BV1 gene; complete genome; movement protein; KW nuclear shuttle protein. XX OS Sri Lankan cassava mosaic virus - [Ker20] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2738 RA Dutt N.; RT ; RL Submitted (28-JUL-2003) to the INSDC. RL Dutt N., Plant Molecular Biology, University of Delhi South Campus, Benito RL Juarez Marg, New Delhi 110021, INDIA. XX RN [4] RX DOI; 10.1007/s00705-005-0579-9. RX PUBMED; 15986172. RA Dutt N., Briddon R.W., Dasgupta I.; RT "Identification of a second begomovirus, Sri Lankan cassava mosaic virus, RT causing cassava mosaic disease in India"; RL Arch. Virol. 150(10):2101-2108(2005). XX DR MD5; 6a51377144cbfe4dd47df39e41bfe05d. DR BioSample; SAMEA3283065. DR EuropePMC; PMC1079959; 15784145. XX FH Key Location/Qualifiers FH FT source 1..2738 FT /organism="Sri Lankan cassava mosaic virus - [Ker20]" FT /segment="B" FT /isolate="Adivaram" FT /mol_type="genomic DNA" FT /country="India:Kerala, Calicut, Adivaram" FT /db_xref="taxon:475454" FT CDS 342..1124 FT /gene="BV1 (NSP)" FT /product="nuclear shuttle protein" FT /db_xref="GOA:Q7T6E7" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:Q7T6E7" FT /protein_id="CAE22458.1" FT /translation="MRRGAYTPRSTPFPRYRRSYNAGKGRSFRSYRRRGPVRPLARRNL FT FGDDHARAFTYKTLSEDQFGPDFIIHNNNYKSSYISMPAKTRALSDNRVGDYIKLVNIS FT FTGTVCIKNSQMESDGSPMLGLHGLFTCVLVRDKTPRIYSATEPLIPFPQLFGSINASY FT ADLSIQDPYKDRFTVIRQVSYPVNTEKGDHMCRFKGTRRFVGRYPIWTSFKDDGGSGDS FT SGLYSNTYKNAILVYYVWLSDVSSQLEMYCKNVTRYIG" FT CDS complement(1133..1993) FT /gene="BC1 (MP)" FT /product="movement protein" FT /db_xref="GOA:Q7T6E6" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:Q7T6E6" FT /protein_id="CAE22459.1" FT /translation="MENNSSNAAYLRSERVEYELTNDSTDVKLSFPSLLDNKISLLKGH FT CCKIDHIVLEYRNQVPINATGHVIIEIHDQRLHDGDSKQAEFTIPVQCNCNLHYYSSSF FT FSMKDINPWRVMYRVVDTNVINGVHFCRIQGKLKLSTAKQSNDIQFRSPKIEILSKAFT FT ERDIDFWSVGRKPQQRKLVQGPSLIGSRSMRYAPCSIGPNESWAVRSEVGLLEPWAVKS FT EAGPSIEKPYSQLNRLNPDALDPGKSVSQIGSDNFTREDLTDIISKTVHMCLNTSMQSH FT VSKNV" XX SQ Sequence 2738 BP; 718 A; 540 C; 632 G; 848 T; 0 other; accggatggc cgcgcccccc tctttgtggt ggcccccccc acgtggggat gtccccctct 60 cacaacgctc actagaaggt tcaacatgtt ggtggcccca cgatgttgtt tataacgtct 120 ataacgtttg agactcgaag cttgtgatgc cacgtatgcg ttattagtac ttcgtctcga 180 agttatgagt gagggcccta tatgtggata tctaaccgca tattgtgtga atggattaaa 240 cgtggcaaga tcatgccgtt tattgggaac tatattatta tgctgttgtc tatatatata 300 ggtatgtcgt gtttcggaga tctgcacatg gtggtggcag gatgagaaga ggtgcctata 360 ccccccgttc tactccattc cctcgttacc ggagatcgta taatgccggt aagggtagat 420 catttcgttc ttaccgtcgt cgtggacctg ttcgtccatt agcccgtcgg aacctgtttg 480 gtgatgacca tgcacgtgca ttcacgtata agaccttatc ggaggatcaa tttggaccgg 540 attttattat acataataat aattataagt catcgtatat atctatgcct gccaaaacac 600 gtgcccttag cgataacagg gtaggtgatt atatcaaact tgtaaatata tcatttacag 660 gtacagtgtg tattaaaaac agccagatgg aatctgacgg aagcccaatg ttgggcctgc 720 atgggctgtt tacttgtgta ttggtccggg ataagacccc tcgtatatat tctgccactg 780 agcctttgat acctttccca cagttgtttg ggtccataaa cgcgagctat gcggatttgt 840 ctatacaaga cccatataag gatcggttca cagttatccg tcaggtgtct tacccagtta 900 atacggagaa gggtgatcat atgtgtcgtt tcaaaggcac tcgacgtttt gttggtagat 960 accctatctg gactagtttt aaagatgatg gtggcagtgg agattcatcg ggattatata 1020 gtaatacgta taaaaatgcc atacttgtat attatgtatg gctcagcgac gtatcgtcac 1080 aattggaaat gtattgtaaa aatgtaactc gatatattgg ttaataaaaa tgttatacat 1140 ttttggatac atggctctgc atactcgtat ttaaacacat atgtactgtc ttgctgatga 1200 tgtcggttaa gtcctctcgt gtgaagttgt ccgatcctat ttgtgatact gactttcctg 1260 ggtccaatgc gtctgggttg agccggttta gttggctgta aggcttttca attgatggcc 1320 cagcctcgct cttaacggcc catggctcga gaagcccaac ctcgcttcta acggcccatg 1380 attcattagg gcctattgaa catggagcat atctcatgga tctggatcct attagacttg 1440 ggccttggac cagtttcctc tgctggggtt tccgacccac ggaccagaaa tcaatgtccc 1500 tctcagtgaa ggccttgctc agtatctcga ttttgggaga tcggaactgt atgtcattag 1560 actgctttgc agttgacagc ttgagttttc cctgtatacg gcagaagtgg accccgttga 1620 tgacgtttgt gtctacgacc ctgtacataa ccctccatgg gtttatgtct ttcatggaga 1680 agaacgatga agaatagtag tgaaggttgc agttgcattg gacgggaata gtaaattctg 1740 cctgttttga gtctccgtca tgcagtcttt ggtcgtgaat ttcaatgatg acatgccctg 1800 tggcgttaat gggtacctgg tttctatact ctaggacgat gtggtctatt ttgcagcagt 1860 gacccttgag gagcgatatt ttgttatcca gaagagatgg aaaactcaac ttgacgtcgg 1920 ttgagtcatt ggttaactca tattcaactc tttcggaacg aagatacgct gcattgctac 1980 tattattctc cattggcccc gcaggggaaa tgcttaaaaa ttaagcccag tgcagaagaa 2040 ataatttaat gtgcataaag caaagcctag agcttaataa atagctaaag gcatatatat 2100 tatattattg atgaaaggtt acaagagcat ccacgtggca gtggattaaa tacatgaaaa 2160 gctatacaat atatttaaaa aaagttgtga cgacgtcatc ttcaacgaat ggaaccggaa 2220 accctaatgc atctcggatg actctggtta agccctctag tagtatgtca catgtttccg 2280 gtgtcatgtg gtagtaattt tggagtttgt aaccccaatc ttccattttg aatgccatat 2340 gtatggctct atctatttct ggtaacagat ccatatcttg ttcttcgaag tggaggtaat 2400 aggaatttga accagtcgcg atgtaaggtt gatgtctgct agtaattttg aattcgaccc 2460 agatcgaatt cttcataatg cgactggata gtcgcacaca tttcttgctg tgttgcaaga 2520 aggaatagtt agtttgggaa agacatagga agaatgagaa tgatgtcggg tttaagtggg 2580 atttctctct cctcaattgg agacacctct gagcaagtct ctagtgaatt ggagacaata 2640 tatatgtgtc tccaaatggc attcttgtaa ttctcaaaag ttacagtcaa atttcaaatt 2700 cgaatttgag atcgaaaagc ggccatccgt ataatatt 2738 //