ID AJ575821; SV 1; circular; genomic DNA; STD; VRL; 2738 BP. XX AC AJ575821; XX DT 09-JUL-2003 (Rel. 76, Created) DT 23-JUL-2008 (Rel. 96, Last updated, Version 7) XX DE Sri Lankan cassava mosaic virus-[Ker4] DNA B, isolate Kattukuda XX KW BC1 gene; BV1 gene. XX OS Sri Lankan cassava mosaic virus-[Ker4] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2738 RA Patil B.L.; RT ; RL Submitted (05-JUL-2003) to the INSDC. RL Patil B.L., Plant Molecular Biology, University of Delhi South campus, RL University of Delhi, New Delhi-21, 110021, INDIA. XX RN [2] RA Patil B.L., Dasgupta I.; RT "Diversity in Indian cassava mosaic virus"; RL Unpublished. XX RN [3] RA Patil B.L.; RT "Molecular biology of Indian cassava mosaic virus"; RL Unpublished. XX RN [4] RX DOI; 10.1006/viro.2001.1251. RX PUBMED; 11853400. RA Saunders K., Salim N., Mali V.R., Malathi V.G., Markham P.G., Stanley J.; RT "Characterisation of Sri Lankan cassava mosaic virus and Indian cassava RT mosaic virus: evidence for acquisition of a DNA B component by a RT monopartite begomovirus"; RL Virology 293(1):63-74(2002). XX RN [5] RX DOI; 10.1007/s00705-005-0624-8. RX PUBMED; 16132175. RA Rothenstein D., Haible D., Dasgupta I., Dutt N., Patil B.L., Jeske H.; RT "Biodiversity and recombination of cassava-infecting begomoviruses from RT southern India"; RL Arch. Virol. 151(1):55-69(2006). XX DR MD5; bdfefb532b7413ba2abb6fcfbac4e290. DR EuropePMC; PMC1079959; 15784145. XX FH Key Location/Qualifiers FH FT source 1..2738 FT /organism="Sri Lankan cassava mosaic virus-[Ker4]" FT /segment="B" FT /host="Manihot esculenta" FT /isolate="Kattukuda" FT /mol_type="genomic DNA" FT /country="India:Kerala state, Thiruvananthapuram district, FT Kattukuda" FT /db_xref="taxon:341701" FT CDS 342..1124 FT /gene="BV1" FT /product="BV1 protein" FT /db_xref="GOA:Q7TAS3" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:Q7TAS3" FT /protein_id="CAE05938.1" FT /translation="MRRGAYTPRSTPFSRDRRSYNAGKGKSFRSYRRRGPVRPLARRNL FT FGDDHARAFTYKTLSEDQFGPDFTIHNNNYKSSYISMPAKTRALSDNRVGDYIKLVNIS FT FTGTVCIKNSQMESDGSPMLGLHGLFTCVLVRDKTPRIYSATEPLIPFPQLFGSINASY FT ADLSIQDPYKDRFTVIRQVSYPVNTEKGDHMCRFKGTRRFVGRYPIWTSFKDDGGSGDS FT SGLYSNTYKNAILVYYVWLSDVSSQLEMYCKYVTRYIG" FT CDS complement(1133..1993) FT /gene="BC1" FT /product="BC1 protein" FT /db_xref="GOA:Q7TAS2" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:Q7TAS2" FT /protein_id="CAE05939.1" FT /translation="MENNSSNAAYLRSERVEYELTNDSTDVKLSFPSLLDNKISLLKGH FT CCKIDHIVLEYRNQVPINATGHVIIEIHDQRLHDGDSKQAEFTIPVQCNCNLHYYSSSF FT FSMKDINPWRVMYRVVDTNVINGVHFCRIQGKLKLSTAKQSNDIQFRSPKIEILSKAFT FT ERDIDFWSVGRKPQQRKLVQGPSLIGSRSMRYAPCSIGPNESWAVRSEVGLHEPWAVKS FT EAGPSIEKPYSQLNRLNPDALDPGKSVSQIGSDNFTREDLNDIISKTVHMCLNTSMQSH FT VSKNV" FT variation 2569..2592 FT /replace="" FT /citation=[4] XX SQ Sequence 2738 BP; 714 A; 543 C; 627 G; 854 T; 0 other; accggatggc cgcgcccccc tctttatggt ggcccccccc acgttgggat gtccccctct 60 cacaacgctc actagaaggc tcaacatgtt ggtggcccca cgatgttgtt tataacgtct 120 ataacgtttg agactcgaag cttgtgatgc cacgtatgcg ttatttgtac ttcgtctcga 180 agttatgagt gagggccctg tatgtggata tctaaccgca tattgtgtga atggattaaa 240 cgtggcaaga tcatgccgtt tattgggaac tatattatta tgctgttgtc tatatatata 300 ggtatgtcgt gtttcggaga tctgcacatg gtggtgtcag gatgagaaga ggtgcctata 360 ccccccgttc tactccattt tctcgtgacc ggagatcgta taatgccggt aagggtaaat 420 catttcgttc ttaccgtcgt cgtggacctg ttcgtccatt agcccgtcgg aacctgtttg 480 gtgatgacca tgcacgtgca ttcacgtata agaccttatc ggaggatcaa tttggaccgg 540 attttaccat acataataat aattataagt catcgtatat atctatgcct gccaaaacac 600 gtgcccttag cgataacagg gtaggtgatt atatcaaact tgtaaatata tcatttacag 660 gtacagtgtg tattaaaaac agccagatgg aatctgacgg aagcccaatg ttgggcctgc 720 atgggctgtt tacttgtgta ttggtccggg ataagacccc tcgtatatat tctgccactg 780 agcctttgat acctttccca cagttgtttg ggtccataaa cgcgagctat gcggatttgt 840 ctatacaaga cccatataag gatcggttca cagttatccg tcaggtgtct tacccagtta 900 atacggagaa gggtgatcat atgtgtcgtt tcaaaggcac tcgacgtttt gttggtagat 960 accctatctg gactagtttt aaagatgatg gtggcagtgg agattcatcg ggattatata 1020 gtaatacgta taaaaatgcc atacttgtat attatgtatg gctcagcgac gtatcgtcac 1080 aattggaaat gtattgtaaa tatgtaactc gatatattgg ttaataaaaa tgttatacat 1140 tttttgatac atggctctgc atactcgtat ttaaacacat atgtactgtc ttgctgatga 1200 tgtcgtttaa gtcctctcgt gtgaagttgt ccgatcctat ttgtgatact gactttcctg 1260 ggtccaatgc gtctgggttg agccggttta gttggctgta aggcttttca attgatggcc 1320 cagcttcgct cttaacggcc catggctcgt gaagcccaac ctcgcttcta acggcccatg 1380 attcattggg gcctattgaa catggagcat atctcatgga tctggatcct attagacttg 1440 ggccttggac cagtttcctc tgctggggtt tccgacccac tgaccagaaa tcaatgtccc 1500 tctcagtgaa ggccttgctc agtatctcga ttttgggaga tcggaactgt atgtcattag 1560 actgctttgc agttgacagc ttgagttttc cctgtatacg gcagaagtgg accccgttga 1620 tgacgtttgt gtctacgacc ctgtacataa ccctccatgg gtttatgtct ttcatggaga 1680 agaacgatga agaatagtag tgaaggttgc agttgcattg gacgggaata gtaaattctg 1740 cctgttttga gtctccgtca tgcagtcttt ggtcgtgaat ttcaatgatg acatgccctg 1800 tggcgttaat gggtacctgg tttctatact ctaggacgat gtggtctatt ttgcagcagt 1860 gacccttgag gagcgatatt ttgttatcca gaagagatgg aaaactcaac ttgacgtcgg 1920 ttgagtcatt ggttaactca tattcaactc tttcggaacg aagatacgct gcattgctac 1980 tattattctc cattggcccc gcaggggaaa tgcttaaaaa ttaagcccag tgcagaagaa 2040 ataatttaat gtgcataaag caaagcccag agcttaataa atagcgaaag gcatatatat 2100 tatattattg atgaaaggtt acaagagcat ccacgtggca gtggattaaa tacatgaaaa 2160 gctatacaat atatttataa aaagttgtga cgacgtcatc ttcaacgaat ggaaccggaa 2220 accctaatgc atctctgatg actctggtta agccctctag tagtatgtca catgtttccg 2280 gtgtcatgtg gtagtaattt ttgagtttgt aaccccaatc ttccattttg aaggccatat 2340 gtatggctct atctatttct ggtaacagat ccatatcttg ttcttcgaaa tggaggtaat 2400 atgaatttga accagtcgcg atgtaaggtt gatgtctgct agtagttttg aattcgaccc 2460 agatcgaatt cttcataatg cgactggata gtcgcacaca tttcttgctg tgttgcaaga 2520 aggaataggt agtttgggaa gacataggaa gaatgagaat gatgttgggt ttaagtggga 2580 tttctctctc ctcaattgga gacacccctg agcaagtctc tagtgaattg gagacaatat 2640 atatgtgtct ccaaatggca ttctcgtaat tctcaaaagt tacagtcaaa tttcaaattc 2700 gaatttgaga tccaaaagcg gccatccgta taatatta 2738 //