ID AJ575820; SV 1; circular; genomic DNA; STD; VRL; 2715 BP. XX AC AJ575820; XX DT 09-JUL-2003 (Rel. 76, Created) DT 23-JUL-2008 (Rel. 96, Last updated, Version 7) XX DE Indian cassava mosaic virus-[Ker3] DNA B, isolate Muvattupuzzha XX KW BC1 gene; BV1 gene. XX OS Indian cassava mosaic virus-[Ker3] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2715 RA Patil B.L.; RT ; RL Submitted (05-JUL-2003) to the INSDC. RL Patil B.L., Plant Molecular Biology, University of Delhi South campus, RL University of Delhi, New Delhi-21, 110021, INDIA. XX RN [2] RA Patil B.L., Dasgupta I.; RT "Diversity in Indian cassava mosaic virus"; RL Unpublished. XX RN [3] RA Patil B.L.; RT "Molecular biology of Indian cassava mosaic virus"; RL Unpublished. XX RN [4] RX DOI; 10.1006/viro.2001.1251. RX PUBMED; 11853400. RA Saunders K., Salim N., Mali V.R., Malathi V.G., Markham P.G., Stanley J.; RT "Characterisation of Sri Lankan cassava mosaic virus and Indian cassava RT mosaic virus: evidence for acquisition of a DNA B component by a RT monopartite begomovirus"; RL Virology 293(1):63-74(2002). XX RN [5] RX DOI; 10.1007/s00705-005-0624-8. RX PUBMED; 16132175. RA Rothenstein D., Haible D., Dasgupta I., Dutt N., Patil B.L., Jeske H.; RT "Biodiversity and recombination of cassava-infecting begomoviruses from RT southern India"; RL Arch. Virol. 151(1):55-69(2006). XX DR MD5; 0f6ce537aec3eea592bd2b019d90d5fc. XX FH Key Location/Qualifiers FH FT source 1..2715 FT /organism="Indian cassava mosaic virus-[Ker3]" FT /segment="B" FT /host="Manihot esculenta" FT /isolate="Muvattupuzzha" FT /mol_type="genomic DNA" FT /country="India:Kerala state, Ernakulam district, FT Muvattupuzha" FT /db_xref="taxon:341700" FT variation 20^21 FT /replace="g" FT /citation=[4] FT variation 35^36 FT /replace="ctc" FT /citation=[4] FT CDS 341..1123 FT /gene="BV1" FT /product="BV1 protein" FT /db_xref="GOA:Q7TAS5" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:Q7TAS5" FT /protein_id="CAE05936.1" FT /translation="MRRGAYTPRSTPFPRDRRSYNAGKGRSFRSYRRRGPVRPLARRNL FT FGDDHARAFTYKTLSEDQFGPDFTIHNNNYKSSYISMPAKTRALSDNRVGDYIKLVNIS FT FTGTVCIKNSQMESDGSPMLGLHGLFTCVLVRDKAPRIYSATEPLIPFPQLFGSINASY FT ADLSIQDPYKDRFTVIRQVSYPVNTEKGDHMCRFKGTRRFVGRYPIWTSFKDDGGSGDS FT SGLYSNTYKNAILVYYVWLSDVSSQLEMYCKYVTRYIG" FT CDS complement(1132..1992) FT /gene="BC1" FT /product="BC1 protein" FT /db_xref="GOA:Q7TAS4" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:Q7TAS4" FT /protein_id="CAE05937.1" FT /translation="MENNSSNAAYLRSERVEYELTNDSTDVKLSFPSLLDNKISLLKGH FT CCKIDHIVLEYRNQVPINATGHVIIEIHDQRLHDGDSKQAEFTIPVQCNCNLHYYSSSF FT FSMKDINPWRVMYRVVDTNVINGVHFCRIQGKLKLSTAKQSTDIQFRSPKIEILSKAFT FT EKDIDFWSVGRKAQQRKLVQGPSLIGSRSMRYAPCSIGPNESWAVRSEVGLNEPWAVKS FT EAGPSIERPYSQLNRLNPDALDPGKSVSQVGLDHFTREDLHNIISKTVDMCLNTSMQSH FT VSKNV" XX SQ Sequence 2715 BP; 712 A; 536 C; 628 G; 839 T; 0 other; accggatggc cgcgccccct ctttatggtg gcccccccca cgttgggatg tccccctctc 60 acaacgcgca ctaggaggtt caacatgttg gtggccccac gatgttgttt ataacgtcta 120 taacgtttga gactcgaagc atgtgatgcc acgtatgcgt tatttgtact tcgtctcgaa 180 gttatgagtg agggccctat gtgtggatat ccaaccgcat atggtgcgaa tggattaaac 240 gtggcaagat catgtcgttt attgggagct atattattat gcggttgtct atatatatgg 300 gtatgtcgtg tttcggagat ctgcacatgg tggtttaagg atgagaagag gtgcctatac 360 cccccgttct actccattcc ctcgtgaccg gagatcgtat aatgccggta agggtagatc 420 atttcgttcg taccgtcgtc gtggaccagt tcgtccatta gctcgtcgga acttgtttgg 480 tgatgaccat gcacgtgcat tcacgtataa gaccttatcg gaggatcaat ttggaccgga 540 ctttaccata cataataata attataagtc atcgtatata tctatgcctg ccaaaacacg 600 tgcccttagc gataacaggg taggtgatta tatcaaactt gtaaatatat catttacagg 660 tacagtgtgt ataaaaaaca gtcagatgga gtctgacgga agcccaatgt tgggcctgca 720 tgggctgttt acttgtgtat tggtccggga taaggcccct cgtatatatt ctgccactga 780 gcctttgata cctttcccac agttgtttgg gtccataaac gcgagctatg cggatttgtc 840 tatacaagac ccatataagg atcggttcac agttatccgt caggtgtctt acccagttaa 900 tacggagaag ggtgatcata tgtgtcgttt caaaggcact cgtcgttttg ttggaagata 960 ccctatctgg actagtttta aagatgatgg tggcagtgga gattcatcgg gattatatag 1020 taatacgtat aaaaatgcca tacttgtata ttatgtatgg ctcagcgacg tatcgtcaca 1080 attggaaatg tattgtaaat atgtaactcg atatattggt taataaaaat gttatacatt 1140 ttttgataca tggctctgca tactcgtatt taaacacata tctactgtct tgctgatgat 1200 gttgtgtaag tcctctcgtg tgaagtggtc caatcctacc tgtgatactg actttcctgg 1260 gtccaatgcg tctgggttga gccggtttag ttggctgtaa ggcctttcaa ttgatggccc 1320 agcctcgctc ttaacggccc atggctcgtt aagcccaacc tcgcttctaa cggcccatga 1380 ttcatttggt cctattgaac atggagcata tctcatggat ctggatccta ttagacttgg 1440 gccctggacc agtttcctct gctgggcttt ccgacccact gaccagaaat caatgtcttt 1500 ctcagtgaag gccttgctca gtatctcgat tttgggagat cggaactgta tgtcagtaga 1560 ctgctttgca gttgacagct tgagttttcc ctgtatacgg cagaagtgga ccccgttgat 1620 gacgtttgtg tctacgactc tgtacataac cctccatggg tttatgtcct tcatggagaa 1680 gaacgatgaa gaatagtagt gaaggttgca gttgcattgg acgggaatag taaattcagc 1740 ctgttttgag tctccgtcat gcagtctttg gtcgtgaatt tcaatgatga catgccctgt 1800 ggcgttaatg ggtacctggt ttctatactc taggacgatg tggtctattt tgcagcagtg 1860 acccttgagg agcgatattt tgttatccag aagagatgga aagctcaact tgacgtctgt 1920 tgagtcattg gttaactcat attcaactct ttcggaacga agatacgctg cattgctact 1980 attattctcc attggccccg caggggaaat gcttaataat taagcccagt gcagaagaaa 2040 taatttaatg tgcataaaac aaagcccaaa gcgtaataaa tagctaaagg catatatatt 2100 atattattga tgaaaggtta caagagcatc cacgtggcag tggattaaat acatgaaaag 2160 ctatacaata tatttaaaaa aagttgtgac gacgtcatct tcaacgaatg gaaccggaaa 2220 ccctaatcca tctctgagga cgctggttaa gccctctagt agtatgttac atgtttccgg 2280 tgtcatgtgg tagtaattgt tgagtttgta accccaatct tccattttga aggccatatg 2340 tatggctcta tctatttctg gtaacagatc catatcttgt tcttcgaatt ggaggtaata 2400 ggaatttgaa ccagtcgcga tgtaagattg atgtctgcta gtagttttga attcgaccca 2460 gatcgaattc ttcataatgc gactggatag tcgcacatat ttcttgctgt gttgcaagaa 2520 ggaatagtta gtttgggaag acataggaag aatgagaatg atgttgggtt taaatgggat 2580 ttctctctcc gcaatcggta ctcagatagt ttagccccca tattaggtac tcaatatata 2640 catgagtacc aaatggcata gatgtaaata atgggaatat aatttgaatt caaaagcggc 2700 catccgtata atatt 2715 //