ID AJ575819; SV 1; circular; genomic DNA; STD; VRL; 2743 BP. XX AC AJ575819; XX DT 09-JUL-2003 (Rel. 76, Created) DT 23-JUL-2008 (Rel. 96, Last updated, Version 8) XX DE Indian cassava mosaic virus-[Ker2] DNA A, isolate Adivaram 2 XX KW AC1 gene; AC3 gene; AC4 gene; AV1 gene; AV2 gene. XX OS Indian cassava mosaic virus-[Ker2] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2743 RA Patil B.L.; RT ; RL Submitted (05-JUL-2003) to the INSDC. RL Patil B.L., Plant Molecular Biology, University of Delhi South campus, RL University of Delhi, New Delhi-21, 110021, INDIA. XX RN [4] RX DOI; 10.1006/viro.2001.1251. RX PUBMED; 11853400. RA Saunders K., Salim N., Mali V.R., Malathi V.G., Markham P.G., Stanley J.; RT "Characterisation of Sri Lankan cassava mosaic virus and Indian cassava RT mosaic virus: evidence for acquisition of a DNA B component by a RT monopartite begomovirus"; RL Virology 293(1):63-74(2002). XX RN [6] RX DOI; 10.1007/s00705-005-0624-8. RX PUBMED; 16132175. RA Rothenstein D., Haible D., Dasgupta I., Dutt N., Patil B.L., Jeske H.; RT "Biodiversity and recombination of cassava-infecting begomoviruses from RT southern India"; RL Arch. Virol. 151(1):55-69(2006). XX DR MD5; 64c65718d9387b768795321ef706fb60. DR EuropePMC; PMC1079959; 15784145. DR EuropePMC; PMC3163225; 21812981. XX FH Key Location/Qualifiers FH FT source 1..2743 FT /organism="Indian cassava mosaic virus-[Ker2]" FT /segment="A" FT /host="Manihot esculenta" FT /isolate="Adivaram 2" FT /mol_type="genomic DNA" FT /country="India:Kerala state, Kozhikode district, Adivaram" FT /db_xref="taxon:341699" FT CDS 135..491 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:Q7TAT0" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q7TAT0" FT /protein_id="CAE05931.1" FT /translation="MWDPLLNEFPESVHGFRCMLAVKYLQLVEGTYSPDTLGYDLIRDL FT ISVIRAKNYVEATSRYHHFNSRLEGSSPSELRQPIQQPCGCPYCPRHKKTSLDKQAHES FT EAQVVQDVQKPRCT" FT CDS 295..1065 FT /gene="AV1" FT /product="AV1 protein" FT /db_xref="GOA:Q7TAS9" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q7TAS9" FT /protein_id="CAE05932.1" FT /translation="MSKRPADIIISTPASKVRRRLNFDSPYSSRAAVPTVRVTKRQAWT FT NRPMNRKPRWYRMFKSPDVPRGCEGPCKVQSFESRHDVVHIGKVMCISDVTRGVGLTHR FT VGKRFCVKSVYILGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEP FT STATVKNMHRDRYQVLRKWSATVTGGQYASKEQALVRRFFRVNNYVVYNQQEAGKYENH FT TENALMLYMACTHASNPVYATLKIRIYFYDSVSN" FT CDS complement(1062..1466) FT /gene="AC3" FT /product="AC3 protein" FT /db_xref="GOA:Q7TAS8" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q7TAS8" FT /protein_id="CAE05933.1" FT /translation="MDSRTGELITAAQAMNGVFIWEVTNPLYFKIIQHDNRPFEMNMDI FT ITIQIRFNHNLRKALGLHQCWMDFKVWTTLQTQTWRFLRVFKTQVLKYLDRLGIICINT FT VVHAVEHVLYNVIAGTDNVEQSNLIKFNVY" FT variation 1517..1525 FT /replace="" FT /citation=[4] FT CDS complement(1552..2610) FT /gene="AC1" FT /product="AC1 protein" FT /db_xref="GOA:Q7TAS7" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q7TAS7" FT /protein_id="CAE05934.1" FT /translation="MTPPKRFQINAKNYFLTYPRCSLSKEEALSQIRALQTPTNTKFIK FT ICRELHENGEPHLHVLIQFEGKYKCQNKRFFDLVSPSRSAHFHPNIQGAKSSSDVESYI FT DKDGDTLEWGTFQVDGRSARGGQQSANDAYAAALNSGSKSAALTILKELAPRDYLRDFH FT HINSNLDRIFTTPPPPYQNPFPLSSFDRVPEELDEWFHENVMDAAARPLRPKSIVIEGD FT SRTGKTMWARALGPHNYLCGHLDLSPKVYNNDAWYNVIDDVDPHYLKHFKEFMGAQKDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEDKNSALKAWAIKNATFISLEEPL FT YSGPNQGHTQSS" FT CDS complement(2151..2459) FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q7TAS6" FT /protein_id="CAE05935.1" FT /translation="MRMGSLICTCSSNSKENTNARISDSSTWYPHPGQHISIRTFKELN FT PAPTSSPTSTKTAIHWNGEHSRSMEDLPEAVNNLQTTLTPQHLTAAVNQRLLRSLKN" XX SQ Sequence 2743 BP; 678 A; 584 C; 677 G; 804 T; 0 other; accggatggc cgcgcccccc gctttgtggt ggaccccccc acgtggagat gtcccccact 60 cagaacgctc cctgaaagcc tgtatagctg tggtccctct ttaagtactt gctcagcaag 120 ttgtaatctg cacaatgtgg gaccctttgt taaatgagtt ccctgaatcc gttcacggtt 180 tccggtgtat gcttgccgtg aaatatcttc agctagttga aggtacgtat tcccccgata 240 cactcgggta cgatttaatt agagatctga tctctgtcat cagggccaaa aattatgtcg 300 aagcgaccag cagatatcat catttcaact cccgcctcga aggttcgtcg ccgtctgaac 360 ttcgacagcc catacagcag ccgtgcggct gtccctactg tccgcgtcac aaaaagacaa 420 gcctggacaa acaggcccat gaatcggaag cccaggtggt acaggatgtt caaaagccca 480 gatgtaccta ggggatgtga aggcccatgt aaggttcaat cgtttgagtc cagacacgat 540 gtggtccata taggtaaggt catgtgcatc tctgatgtca ctcgtggagt tgggcttact 600 catcgcgtgg gtaagaggtt ttgcgtcaag tccgtttaca tcctgggcaa gatatggatg 660 gatgaaaata tcaagacgaa gaatcacacg aacagtgtga tgtttttcct cgtaagggat 720 cgtaggcctg ttgataagcc ccaggatttt ggtgaagtgt ttaatatgtt cgataatgaa 780 cctagtacag ctacggtgaa gaacatgcat cgtgatcgct atcaagtcct caggaagtgg 840 agtgccacag tcactggtgg tcagtatgcg agcaaggaac aggctttagt taggcgtttt 900 tttagagtta ataattatgt tgtgtataac cagcaagagg ctggcaagta tgaaaatcat 960 actgagaatg cattgatgct gtacatggcg tgtacgcatg cctctaatcc tgtatacgct 1020 acgctgaaga ttagaatcta cttctacgat tcggtcagca attaataaac attaaatttt 1080 attaaattag actgctcaac attgtcagtc ccagcgatta cattatacaa tacatgttct 1140 actgcgtgta caaccgtatt aatacatata atccctaatc tatcgaggta ttttaatact 1200 tgggtcttaa ataccctcaa gaaacgccag gtctgagtct gtaaggtcgt ccagaccttg 1260 aaatccatcc agcattgatg tagtcccaac gctttcctca ggttgtggtt gaagcgtatc 1320 tggatggtta ttatgtccat gttcatttcg aacggtctgt tgtcgtgttg aatgatcttg 1380 aaatagaggg gatttgttac ctcccagata aagacgccat tcatcgcctg agctgcagtg 1440 ataagttccc ctgtgcgtga atccatggtt gtggcagttg atgtgtacgt agtaagagca 1500 cccgcagttg agatctaaag atctaccctt ttacgccgga tggctttacg cttagctgct 1560 ctgtgtgtga ccttgattgg gacctgagta taatggttct tcgagggaga tgaaggtcgc 1620 atttttgata gcccaggctt tcaatgcgct gtttttgtct tcgtccaaga actctttata 1680 gctggaattg ggccctggat tgcagaggaa gatagtggga atacctcctt taatttgaac 1740 tggctttccg tacttggtgt ttgattgcca gtctttctgg gcccccatga attctttgaa 1800 gtgctttagg tagtggggat ctacgtcatc aatgacgttg taccacgcat cattgttgta 1860 tactttggga cttaagtcca gatgtccaca tagataatta tgtggaccca atgcacgggc 1920 ccacatagtt ttgcctgtcc gactatcgcc ctcgattacg attgacttag gtctcaaggg 1980 ccgcgcagcg gcatccatca cgttttcgtg aaaccactcg tcgagttctt ctggaactcg 2040 gtcaaatgaa gagaggggga aagggttctg atacggaggt ggtggtgttg taaaaatgcg 2100 atccaggttc gagttgatgt gatggaagtc cctgaggtaa tccctaggtg ctaattcttt 2160 aaggatcgta agagccgctg atttactgcc gctgttaagt gctgcggcgt aagcgtcgtt 2220 tgcagattgt tgaccgcctc tggcagatct tccatcgacc tggaatgttc cccattccaa 2280 tgtatcgccg tctttgtcga tgtaggactc gacgtcggag ctggatttag ctccttgaat 2340 gttcggatgg aaatgtgctg acctggatgg ggataccagg tcgaagaatc gcttattctg 2400 gcatttgtat tttccttcga attggatgag cacgtgcaga tgaggctccc cattctcatg 2460 gagctctcta cagatcttga tgaatttagt gttggtgggt gtttgaagcg ctcgaatttg 2520 tgaaagtgcc tcttctttag agagagagca cctaggataa gtgaggaaat agtttttggc 2580 gtttatttga aagcgcttag gaggtgtcat tctctctcct caatcggtac tcaaccattt 2640 agcccctata ttaggtactc aatatataca tgagtaccaa atggcatata tgtaaataag 2700 aggaatataa tttgaatttg aaagcggcca tccgtataat att 2743 //