ID   AJ564639; SV 1; linear; genomic RNA; STD; VRL; 1796 BP.
XX
AC   AJ564639;
XX
DT   04-DEC-2003 (Rel. 78, Created)
DT   04-DEC-2003 (Rel. 78, Last updated, Version 1)
XX
DE   Lily symptomless virus genes for TGBp2, TGBp3, coat protein and nucleic
DE   acid binding protein genomic RNA, isolate AA
XX
KW   coat protein; nucleic acid binding protein; ORF3; ORF4; ORF5; ORF6; TGBp2;
KW   TGBp3.
XX
OS   Lily symptomless virus
OC   Viruses; Riboviria; Tymovirales; Betaflexiviridae; Quinvirinae; Carlavirus.
XX
RN   [1]
RP   1-1796
RA   Adams M.J.;
RT   ;
RL   Submitted (28-MAY-2003) to the INSDC.
RL   Adams M.J., Plant Pathogen Interactions Division, Rothamsted Research,
RL   Harpenden, Herts AL5 2JQ, UNITED KINGDOM.
XX
RN   [2]
RX   DOI; 10.1007/s00705-003-0207-5.
RX   PUBMED; 14648295.
RA   Zheng H.Y., Chen J., Zhao M.F., Lin L., Chen J.P., ntoniw J.F., Adams M.J.;
RT   "Occurrence and sequences of Lily mottle virus and Lily symptomless virus
RT   in plants grown from imported bulbs in Zhejiang province, China";
RL   Arch. Virol. 148(12):2419-2428(2003).
XX
DR   MD5; 5c669c4ea81f059ceb068b6935c4879b.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1796
FT                   /organism="Lily symptomless virus"
FT                   /host="Lilium sp. cv. Alma Ata"
FT                   /isolate="AA"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Zhejiang, Hangzhou"
FT                   /db_xref="taxon:12173"
FT   CDS             1..321
FT                   /gene="ORF3"
FT                   /product="TGBp2"
FT                   /db_xref="GOA:Q70M00"
FT                   /db_xref="InterPro:IPR001896"
FT                   /db_xref="UniProtKB/TrEMBL:Q70M00"
FT                   /protein_id="CAD92118.1"
FT                   /translation="MPLTPPPDYTRVYTALAIGASIAFFTGLITRNTLPSVGDLQHNLP
FT                   HGGRYRDGTKSVEYCGPRKLNSVESGSRWTFQPWLLVIVLVALIIALGRQGHNCRACGR
FT                   SH"
FT   CDS             303..497
FT                   /gene="ORF4"
FT                   /product="TGBp3"
FT                   /db_xref="InterPro:IPR003411"
FT                   /db_xref="UniProtKB/TrEMBL:Q83088"
FT                   /protein_id="CAD92119.1"
FT                   /translation="MRSVALTLCAIIAGYLLVSNLQNVFSPEVCTLVITGESIRINGCN
FT                   LSPAHFRAISHLKVLQVHL"
FT   CDS             543..1418
FT                   /gene="ORF5"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q70LZ4"
FT                   /db_xref="InterPro:IPR000052"
FT                   /db_xref="InterPro:IPR013569"
FT                   /db_xref="UniProtKB/TrEMBL:Q70LZ4"
FT                   /protein_id="CAD92120.1"
FT                   /translation="MQSRPAQESGAASETPARGRSTPSDAPRDEPTNYNNNAESLLEQR
FT                   LTRLIEKLNAEKHNSNLRNVAFEIGRPSLEPTSAMRRNPANPYGRFSIDELFKMKVGVV
FT                   SNNMATTEQMAKIASDIAGLGVPTEHVASVILQMVIMCACVSSSAFLDPEGSIEFENGA
FT                   VPVDSITAIMKKHAGLRKVCRLYAPIVWNSMLVRNQPPADWQAMGFQYNTRFAAFDTFD
FT                   YVTNQAAIQPVEGIIRRPTSAEVIAHNAHKQLALDRSNRNERLGSLETEYTGGVQGAEI
FT                   VRNHRYANNG"
FT   CDS             1411..1749
FT                   /gene="ORF6"
FT                   /product="nucleic acid binding protein"
FT                   /db_xref="GOA:Q70LZ3"
FT                   /db_xref="InterPro:IPR002568"
FT                   /db_xref="UniProtKB/TrEMBL:Q70LZ3"
FT                   /protein_id="CAD92121.1"
FT                   /translation="MDEALKRRTTIVLCLLSAFPRDICRDILRRTSSHIVGLGRSRYAR
FT                   RRRALQIGRCERCYRVYPPVCGSKCDNKTCRPGLSINTNVANYIDHGVTEVIPWISPHR
FT                   GQFYLRPK"
XX
SQ   Sequence 1796 BP; 471 A; 462 C; 438 G; 425 T; 0 other;
     atgccactta cgccacctcc tgattataca agagtttaca ctgcactcgc cattggtgct        60
     tccatcgcat ttttcactgg attgatcacg cgtaacacac taccttccgt tggtgatttg       120
     cagcacaact tgccccacgg tgggaggtac cgggacggca caaaaagtgt agagtactgc       180
     ggcccccgga aactgaattc tgtcgagagc ggtagccgct ggaccttcca gccttggctc       240
     ttggtcatcg tgcttgttgc actgatcatc gctcttggtc gacagggaca taactgtcgg       300
     gcatgcggtc ggtcgcacta acactttgcg ccatcatcgc tggctatttg ctcgtgtcta       360
     acttgcaaaa cgtattctcg cccgaggttt gcactttagt cattactggt gagtccatcc       420
     gtataaacgg ctgtaacctt agtccagcac atttccgagc aatctcacac ttgaaagtgc       480
     tacaagttca cctttaggtt tacaggctgg cggacgatta aactctcact tgttaccgca       540
     agatgcaatc aagaccagca caagaatcag gcgctgcaag cgagacccca gcacgtggca       600
     ggtccacacc tagtgatgca ccaagagacg agcccaccaa ttacaataat aacgctgagt       660
     cactgttaga gcaacgacta acccggctga tcgagaagct caatgctgaa aagcacaatt       720
     ccaatctgcg aaatgtggct ttcgagatcg ggaggccctc actggaaccc acgagtgcca       780
     tgcgaaggaa ccctgcgaac ccctacggga gattctcaat tgacgaactc ttcaagatga       840
     aggttggcgt cgtatctaac aacatggcaa ccactgaaca aatggctaag atagcgtcag       900
     acatcgcagg gcttggggta ccaacagagc acgtcgcatc agtaatattg cagatggtca       960
     tcatgtgtgc ttgcgtaagc agttcggcgt tccttgaccc tgagggcagc attgagtttg      1020
     agaatggagc ggtgcccgtc gactccatca ctgcgatcat gaagaagcac gctggactgc      1080
     ggaaagtctg ccggctctac gcccctatcg tgtggaacag catgcttgtg cgaaaccaac      1140
     caccagctga ttggcaagct atgggcttcc aatacaacac gcggttcgca gcttttgaca      1200
     ccttcgacta cgtgactaac caggcggcta tccaacctgt cgagggtatc atcaggcgac      1260
     ccacttctgc tgaggtcatt gcccacaacg cgcacaagca attagccctg gataggtcaa      1320
     accgcaatga gcgtctgggg agcctggaaa ctgaatacac cggtggtgta caaggagctg      1380
     aaatcgtccg aaatcatcga tacgcaaata atggatgaag cattgaagcg acgaactacc      1440
     atagtgttgt gtttgctttc agcatttccg cgtgatattt gccgcgatat attgcggcgc      1500
     acctctagtc acattgttgg gcttggaaga tctaggtatg ctagacgacg ccgagctctc      1560
     caaattggca ggtgtgagag gtgttatcga gtgtatccac ctgtctgtgg atctaagtgt      1620
     gacaataaga cctgcaggcc aggcctatct ataaatacca acgtggccaa ctatatcgat      1680
     catggagtaa ccgaggtgat accatggatc tcaccacatc gtggccagtt ctacctaaga      1740
     cctaaataat tttaagggta aaactataaa aaaaatttgt ttttaaatat tttagc          1796
//