ID   AJ557450; SV 1; circular; genomic DNA; STD; VRL; 2659 BP.
XX
AC   AJ557450;
XX
DT   05-JAN-2004 (Rel. 78, Created)
DT   29-MAR-2004 (Rel. 79, Last updated, Version 2)
XX
DE   Sida micrantha mosaic virus segment A, complete genome, isolate A1B3
XX
KW   AC1 gene; AC2 gene; AC3 gene; AC4 gene; AV1 gene; coat protein;
KW   complete genome; replication associated protein; replication enhancer;
KW   transcriptional regulator.
XX
OS   Sida micrantha mosaic virus
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-2659
RA   Jovel J.;
RT   ;
RL   Submitted (24-APR-2003) to the INSDC.
RL   Jovel J., Department of Molecular Biology, Stuttgart University,
RL   Pfaffenwaldring 57, Stuttgart, 70550, GERMANY.
XX
RN   [2]
RX   DOI; 10.1007/s00705-003-0235-1.
RX   PUBMED; 15045569.
RA   Jovel J., Reski G., Rothenstein D., Ringel M., Frischmuth T., Jeske H.;
RT   "Sida micrantha mosaic is associated with a complex infection of
RT   begomoviruses different from Abutilon mosaic virus";
RL   Arch. Virol. 149(4):829-841(2004).
XX
DR   MD5; a59bbf442c9f5da2a597f850322d94f3.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2659
FT                   /organism="Sida micrantha mosaic virus"
FT                   /segment="A"
FT                   /isolate="A1B3"
FT                   /mol_type="genomic DNA"
FT                   /country="Brazil"
FT                   /db_xref="taxon:228897"
FT   CDS             250..1005
FT                   /gene="AV1"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q70PC3"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:Q70PC3"
FT                   /protein_id="CAD89701.1"
FT                   /translation="MPKRDPSWRQMAGTSKVSRSSNFSPRGGIGPKFNKASEWVNRPMY
FT                   RKPRIYRTIRTPDVPRGCEGPCKVQSYEQRHDISHVGKVMCISDVTRGNGITHRVGKRF
FT                   CVKSVYILGKIWMDENIKLKNHTNSCMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATV
FT                   KNDLRDRFQVMHKFYAKVTGGQYASNEQALVKRFWKVNNHVVYNHQEGGKYENHMENAL
FT                   LLYMACTHASNPVYATLKIRIYFYDSITN"
FT   CDS             complement(1002..1400)
FT                   /gene="AC3"
FT                   /product="replication enhancer"
FT                   /db_xref="GOA:Q70PC2"
FT                   /db_xref="InterPro:IPR000657"
FT                   /db_xref="UniProtKB/TrEMBL:Q70PC2"
FT                   /protein_id="CAD89702.1"
FT                   /translation="MDSRTGELITVPQAENGVYIWEITNPLYFKIYRVEYRPYTTTRVY
FT                   HIQIRLNLNLRRALDLHKAFLNFQVWTTSLTASGTTYLIRFRHLVMMYLDQLGVISINN
FT                   VIRAVRFATDRSYVRYVLENHEIKFKLY"
FT   CDS             complement(1147..1536)
FT                   /gene="AC2"
FT                   /product="transcriptional regulator"
FT                   /db_xref="GOA:Q70PC1"
FT                   /db_xref="InterPro:IPR000942"
FT                   /db_xref="UniProtKB/TrEMBL:Q70PC1"
FT                   /protein_id="CAD89703.1"
FT                   /translation="MLNSSSSTPPSIKPRHRAAKRKGTRRRRIDLECGCTVYVHINCSN
FT                   HGFTHRGTHHCASGREWRLYLGDNKSPVFQDIPSRVQTVHNDKSVPHPNTAQPQPQESI
FT                   GSPQGIPELPSLDDISDSFWNDLFD"
FT   CDS             complement(1457..2533)
FT                   /gene="AC1"
FT                   /product="replication associated protein"
FT                   /db_xref="GOA:Q70PC0"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/TrEMBL:Q70PC0"
FT                   /protein_id="CAD89704.1"
FT                   /translation="MPSKPRRFRVQAKNIFLTYPQCSLTKEEALSQLQAIQLPSNKKFI
FT                   KICRELHEDGQPHLHSLLQLEGKIQVTNNRLFDLVSPNRSARFHPNIQGAKSSSDVKSY
FT                   IDKDGDTVEWGEFQVDGRSARGGQQTANDAAADALNAPDKQTALRIIREKLPEKYLFQF
FT                   HNLNSNLDRIFSKAPEPWVPPFPISSFINVPEEMQEWADDYFGRSSARPLRPMSLIVEG
FT                   DSRTGKTMWARALGPHNYLSGHMDFNSRVFSNEVEYNVIDDVTPQYLKLKHWKELIGAQ
FT                   RDWQSNCKYGKPVQIKGGIPSIVLCNPGEGVSYKEFLDKEENAALKSWTLHNAKFIFID
FT                   SPLYQTTSQSGEEERNSP"
FT   CDS             complement(2116..2373)
FT                   /gene="AC4"
FT                   /db_xref="InterPro:IPR002488"
FT                   /db_xref="UniProtKB/TrEMBL:Q70PB9"
FT                   /protein_id="CAD89705.1"
FT                   /translation="MGNLTSTACCNWKERSKSQITDCSTWYPQIGQHVSIRTFRELNPA
FT                   PTSSPTSTRTEIQLNGGNSRSTEEVLGEANRQLMTLQLTR"
XX
SQ   Sequence 2659 BP; 671 A; 601 C; 618 G; 769 T; 0 other;
     accggatggc cgcgcgattt tcccccccct cacgtggcgc tctggtggcc gctggatccc        60
     cctctccccc gctcccgtcg gccccctgtt cgcgcgatgt tctccttaaa ttcaaattaa       120
     aggatttaac ttttgtctgt ccaattatag tgcgcctgag cagcttagat aactgtgtta       180
     agacttggtc cctaagtttt atggccccta taaaactaaa gcaagcatga cgtcaatctt       240
     taattcgaaa tgcctaagcg ggatccctca tggcgccaga tggcgggaac ctcaaaggta       300
     agccgctctt ctaatttctc accacgtgga ggtataggcc caaaattcaa caaggcctcg       360
     gaatgggtca accggcccat gtacaggaag cccaggatat atcggacgat cagaacgcct       420
     gatgttccta gaggctgtga agggccctgt aaggtccagt cctacgagca acgtcacgat       480
     atttcccatg ttgggaaggt gatgtgtata tctgatgtga cacgcggtaa cggtattacc       540
     catcgtgtcg gtaagcgttt ttgtgttaag tctgtgtata tactaggcaa gatatggatg       600
     gacgagaata tcaagctcaa gaaccacacg aacagttgca tgttctggtt ggtcagggac       660
     cgtagaccat atggcactcc aatggatttt ggccaggtgt tcaacatgtt tgacaacgag       720
     cccagcactg caaccgtgaa gaacgatctc cgtgatcgtt tccaggtcat gcacaagttc       780
     tatgccaagg tcacgggtgg acagtatgcc agcaatgagc aggcgctggt caagcggttc       840
     tggaaggtca acaatcatgt ggtctataac caccaggagg gtggcaagta tgagaatcac       900
     atggagaacg ctttattatt gtatatggca tgtactcatg catctaaccc tgtgtatgca       960
     acgctgaaga ttcgaatcta tttctacgat tcgatcacga attaataaag cttgaatttt      1020
     atttcatgat tttccagtac atatctgaca tatgatctgt cagttgcaaa gcgaacagct      1080
     ctaattacat tattaatgga aattacacct aattgatcta agtacatcat gactaaatgt      1140
     ctaaacctaa tcaaataagt cgttccagaa gctgtcagag atgtcgtcca gacttggaag      1200
     ttcaggaatg ccttgtggag atccaatgct ctcctgaggt tgaggttgag ccgtatttgg      1260
     atgtggtaca ctcttgtcgt tgtgtacggt ctgtactcta ctcggtatat cttgaaatac      1320
     aggggatttg ttatctccca gatataaacg ccattctctg cctgaggcac agtgatgagt      1380
     tcccctgtgc gtgaatccat gattgctgca gttgatgtgg acgtagacag tgcacccgca      1440
     ctccagatct atccttctac ggcgagttcc tttcctcttc gccgctctgt gacgtggttt      1500
     gatagagggg ggagtcgatg aagatgaatt tagcattgtg gagtgtccac gattttagag      1560
     ctgcattctc ctctttgtcg aggaactctt tataactgac tccctcccca ggattgcaga      1620
     gcacgattga tgggattcca cctttaattt gaactggctt tccgtattta caatttgact      1680
     gccagtctct ttgggcccca atcaattctt tccagtgttt cagctttaga tattgcggag      1740
     tgacatcatc aatgacgtta tactccactt cgtttgagaa aacacgagag ttgaaatcca      1800
     tatgtccact caagtaatta tgtgggccta acgcacgagc ccacatcgtc ttccctgtcc      1860
     ttgaatcacc ttcaactatc aaactcatag gtctcaatgg ccgcgcagaa ctcctcccaa      1920
     aataatcatc cgcccactct tgcatctctt cgggaacgtt tatgaaggag gaaatgggaa      1980
     acggagggac ccacggctct ggtgcctttg agaaaattct atctaaatta gaatttaaat      2040
     tgtgaaactg gaaaagatat ttctcaggca atttctctct aataattcgc agagctgttt      2100
     gtttatccgg agcatttaac gcgtcagctg cagcgtcatt agctgtctgt tggcctcccc      2160
     tagcacttct tccgtcgacc tggaattccc cccattcaac tgtatctccg tccttgtcga      2220
     tgtaggactt gacgtcggag ctggatttag ctccctgaat gttcggatgg aaacgtgctg      2280
     acctatttgg ggataccagg tcgaacaatc tgttatttgt gacttggatc tttccttcca      2340
     attgcaacaa gctgtggagg tgaggttgcc catcttcgtg aagctctctg cagatcttga      2400
     tgaatttttt attggagggt aattgaatag cttgcaattg ggaaagtgcc tcctcttttg      2460
     taagagagca ctgtggatat gtaaggaaaa tgtttttagc ttggactcta aaacgacgtg      2520
     gtttggatgg catttttgta aataaggcag tgtactccgg atgagagctc gctcaataag      2580
     tctctatgaa ttggagtatg gagtacaata tatatgagga gttcttagag tgcataaagc      2640
     ggccatccgt tctaatatt                                                   2659
//