ID   AJ549960; SV 1; circular; genomic DNA; STD; VRL; 2608 BP.
XX
AC   AJ549960;
XX
DT   14-MAR-2003 (Rel. 75, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 3)
XX
DE   Dicliptera yellow mottle virus segment A, complete sequence.
XX
KW   AC1 gene; AC2 gene; AC3 gene; AV1 gene; coat protein;
KW   replication associated protein; replication enhacement protein;
KW   Trans-activating protein.
XX
OS   Dicliptera yellow mottle virus
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-2608
RA   Echemendia A.L.;
RT   ;
RL   Submitted (13-MAR-2003) to the INSDC.
RL   Echemendia A.L., Plantas, Ctro Ingenieria Genetica y Biotecnologia, Ave 31
RL   entre 158 y 190. Cubanacan. Playa., Havana, CUBA.
XX
RN   [2]
RA   Echemendia A.L., Ramos P.L., Peral R., Fuentes A.D., Pujol M.,
RA   Gonzalez G.A.;
RT   "First report of Dicliptera yellow mottle virus (DiYMoV) infecting
RT   Dicliptera vahliana in Cuba";
RL   Unpublished.
XX
DR   MD5; 895dd3fc93e7218153d5f017dda74856.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2608
FT                   /organism="Dicliptera yellow mottle virus"
FT                   /segment="A"
FT                   /host="Dicliptera vahliana Nees"
FT                   /isolate="Cuban"
FT                   /mol_type="genomic DNA"
FT                   /country="Cuba"
FT                   /db_xref="taxon:94700"
FT   CDS             191..979
FT                   /gene="AV1"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q80IH9"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="UniProtKB/TrEMBL:Q80IH9"
FT                   /protein_id="CAD79312.1"
FT                   /translation="MSKRDAPWRMMVGPSKVRRTLNFSPGAGLGSKSNRASSWVNRPMY
FT                   RKPRIYRMYRTPDVPKGCEGPCKVQSYEQRHDISHVGKVMCISDVTRGNGITHRVGKRF
FT                   CVKSVYILGKIWMDENIKLKNHTNSVMFWVVRDRRPYGTPMDFGQVFNMFDNEPSTATV
FT                   KNDLRDRYQVMHKFYAKVTGGQYASNEQALVKRFWKVNNHVVYNHQEAGKYENHTENAL
FT                   LLYMACTHASNPVYATLKIRIYFYDSIMNLIKFEFYFMIF"
FT   CDS             complement(944..1342)
FT                   /gene="AC3"
FT                   /product="replication enhacement protein"
FT                   /db_xref="GOA:Q80IH8"
FT                   /db_xref="InterPro:IPR000657"
FT                   /db_xref="UniProtKB/TrEMBL:Q80IH8"
FT                   /protein_id="CAD79313.1"
FT                   /translation="MDSRTGGTITAVQATSGVFIWEVPNPLYFKILQVEDPMYTRSRVY
FT                   HLQIRFNYNLRKKLDLHKAFFNFQVWTTSLTASGMIYLNRFKFLVLSYLDNIGVISINN
FT                   VIRAVHYATDKSYVTDVLENHEIKFKFY"
FT   CDS             complement(1089..1478)
FT                   /gene="AC2"
FT                   /product="Trans-activating protein"
FT                   /db_xref="GOA:Q80IH7"
FT                   /db_xref="InterPro:IPR000942"
FT                   /db_xref="UniProtKB/TrEMBL:Q80IH7"
FT                   /protein_id="CAD79314.1"
FT                   /translation="MRSSSPSHCPSIKPIHKRAKKRAIRRRRVDLNCGCSIYIHINCAN
FT                   HGFTHRGNHHCSSSNEWRFYLGSSKSPLFQDTPSRGSNVHTQQGVSPSNQVQLQPSEEI
FT                   GSSQSLLQLPSLDDFSDSFWDDLFK"
FT   CDS             complement(1420..2475)
FT                   /gene="AC1"
FT                   /product="replication associated protein"
FT                   /db_xref="GOA:Q80IH6"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/TrEMBL:Q80IH6"
FT                   /protein_id="CAD79315.1"
FT                   /translation="MPISYTISVNAKNYFLTYPQCSLSKEEALTQIQSISTPVNKKFIK
FT                   ICRELHENGETHLHVLIQFEGKFNCKNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYI
FT                   NKDGDTIEWGVFQVDGRSARGGCQSVNDTYAKALNASSAIEALQILKEEQPQHFFLQHH
FT                   NLVTNATKIFMKAPEPWVPPFQLSSFTNVPEEMQEWADNYFGMSAAARPERPISIIVEG
FT                   DSRTGKTMWARTLGKHNYLSGHLDFNSRVYSNDVEYNVIDDVSPNYLKLKHGEDLIGAQ
FT                   KDWQSNCKYGKPVQIKGGIPSIVLCNPGEGSSYKDFLNKEENKGLHNWTIHNAIFITLT
FT                   LPLYQTNSQES"
XX
SQ   Sequence 2608 BP; 704 A; 486 C; 568 G; 850 T; 0 other;
     accggatggc cgcgtcggtc ccactacttt tccgtactct ctggtggtcc cccctctctt        60
     taatttgaat taaatgtttg tggaccaatc atattgcatg tgcagagtct agatatttgt       120
     gttactactt gctgattaag tttagtgggc ctataaaatt caaattaaag cccattctca       180
     ataattcaaa atgtctaaga gggatgcccc atggcgtatg atggtgggtc cctctaaggt       240
     tagacgtact ctcaatttct cacctggtgc tggtttgggc tcaaagtcca atagggcttc       300
     ttcttgggtt aacaggccca tgtacaggaa gcccaggata tatcgaatgt acagaactcc       360
     tgatgtgccc aaagggtgtg aaggcccatg taaggtccag tcttatgagc agcgacatga       420
     catctcacat gttggtaagg tgatgtgcat atctgatgtg acacgtggta atggtattac       480
     tcaccgtgtg gggaaacgtt tttgtgttaa gtctgtgtac attttaggga agatatggat       540
     ggatgagaac atcaagctca agaaccacac caatagtgtc atgttttggg tggttagaga       600
     caggagacca tatggcactc ctatggattt tggtcaggtg tttaacatgt ttgataatga       660
     gcccagtact gctactgtga agaacgatct tcgtgatcgt tatcaagtca tgcataagtt       720
     ctatgccaag gtgacaggtg gacagtatgc cagcaatgag caggctttgg tgaagcgttt       780
     ctggaaggtg aataatcatg tagtgtacaa tcatcaagaa gcagggaaat atgaaaatca       840
     tacagagaat gctctgttat tgtatatggc atgtactcat gcctctaatc ctgtgtatgc       900
     tacattgaaa attcggatct atttttatga ttcgattatg aatttaataa aatttgaatt       960
     ttatttcatg attttctagt acatctgtta catacgattt gtctgttgca taatgaacag      1020
     ctctaatgac attgttaatt gaaataacac ctatattatc taaatatgac aatacaagga      1080
     atttgaatct atttaaataa atcatcccag aagctgtcag agaagtcgtc cagacttgga      1140
     agttgaagaa ggctttgtga agatccaatt tcttccgaag gttgtaattg aacctgattt      1200
     gaaggtgata caccctgctg cgtgtgtaca ttggatcctc tacttggagt atcttgaaat      1260
     agaggggatt tggaacttcc caaataaaaa cgccactcgt tgcttgaact gcagtgatgg      1320
     ttccccctgt gcgtgaatcc atgattagca caattaatgt gtatgtatat tgaacaacca      1380
     caattgaggt caactcttct tcgtcggatt gctctttttt tagctctctt gtgaattggt      1440
     ttgatagagg ggcaatgtga gggtgatgaa gatcgcatta tgaatggtcc aattatgtaa      1500
     acctttattt tcctctttgt ttaggaaatc tttatagctg gagccctcac caggattgca      1560
     tagcacgatt gatggtatac ctcctttaat ttgaactggc tttccatatt tacagtttga      1620
     ctgccagtct ttctgggccc caattaagtc ttccccgtgc tttaatttca aataattagg      1680
     gctgacatca tcaatgacgt tgtattccac gtcatttgaa tataccctag aattgaaatc      1740
     cagatgacct gatagatagt tatgtttgcc tagagtcctg gcccacattg tcttgcctgt      1800
     tcttgaatca ccttcgacga tgatactaat aggtctctcc ggccgcgcag cggcactcat      1860
     gccaaaataa ttgtctgccc attcctgcat ttcttctggt acgttagtga aggaagaaag      1920
     ttgaaacgga gggacccacg gttctggtgc tttcatgaaa atcttagttg catttgtaac      1980
     cagattatga tgttggagga agaagtgctg aggttgttcc tcttttaata tttgaagtgc      2040
     ctcaattgca gaagatgcat ttaatgcctt tgcatatgta tcgttaactg attggcaacc      2100
     tcctctagca cttctaccgt cgacctggaa aactccccat tcaattgtat ctccgtcctt      2160
     gttgatatag gacttgacgt cggagctgga tttagctccc tgaatgttcg gatggaaatg      2220
     tgctgacctg gttggggaaa ccagatcgaa gaatctgtta tttttgcagt tgaactttcc      2280
     ttcgaactgg atgagcacat gaagatgagt ctccccattt tcatggagtt ctctacaaat      2340
     cttgataaac ttcttgttaa ctggagtaga tatgctttgt atttgtgtta gtgcttcttc      2400
     tttgctaaga gaacactgtg gatatgtgag gaaataattt ttggcattca ctgaaatcgt      2460
     ataactgatt ggcatatttg taatatgata ttggtaccag tttgagctct cttcaaatgt      2520
     ctatataatt ggtagaactg gtagactata tatacataaa ccttctttaa gggattagca      2580
     acacgttgcg gccatccgat ataatatt                                         2608
//