ID   AJ544531; SV 1; circular; genomic DNA; STD; VRL; 2644 BP.
XX
AC   AJ544531;
XX
DT   17-FEB-2003 (Rel. 74, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 2)
XX
DE   Bean golden yellow mosaic virus DNA A, complete sequence.
XX
KW   coat protein; complete genome; cp gene; ren gene; rep gene;
KW   replication associated protein; replication enhancement protein;
KW   trans-activating protein; trap gene.
XX
OS   Bean golden yellow mosaic virus
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-2644
RA   Echemendia A.L.;
RT   ;
RL   Submitted (13-FEB-2003) to the INSDC.
RL   Echemendia A.L., Planta, Ctro Ingenieria Genetica y Biotecnologia, Ave 31
RL   entre 158 y 190. Cubanacan. Playa., Havana, CUBA.
XX
RN   [2]
RX   DOI; 10.1094/PDIS.2001.85.9.1030C.
RX   AGRICOLA; IND23258208.
RA   Echemendia A.L., Ramos P.L., Peral R., Fuentes A., Gonzalez G.,
RA   Sampedro J., Morales F.;
RT   "Cuban isolate of Bean golden yellow mosaic virus ia member of the
RT   Mesoamerican BGYMV group";
RL   Plant Dis. 85(9):1030-1030(2001).
XX
DR   MD5; 32a109777fb78c6c9bd0d3aa9ae69b31.
DR   EuropePMC; PMC5408669; 28358318.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2644
FT                   /organism="Bean golden yellow mosaic virus"
FT                   /segment="DNA A"
FT                   /mol_type="genomic DNA"
FT                   /country="Cuba"
FT                   /db_xref="taxon:220340"
FT   CDS             197..952
FT                   /gene="cp"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q80PA7"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:Q80PA7"
FT                   /protein_id="CAD67488.1"
FT                   /translation="MPKRDAPWRQMAGTYKVSRSGNYSPGSGMGSKSNKANAWVNRPMY
FT                   RKPRIYRMYRSPDVPKGCEGPCKVQSYEQRHDISHVGKVMCISDITRGNGITHRVGKRF
FT                   CVKSVYILGKIWMDENIKLKNHTNSVIFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATV
FT                   KNDLRDRYQVMHRFNAKVTGGQYASNEQALVRRFWKVNNHVVYNHQEAGKYENHTENAL
FT                   LLYMACTHASNPVYATLKIRIYFYDSITN"
FT   CDS             complement(949..1347)
FT                   /gene="ren"
FT                   /product="replication enhancement protein"
FT                   /db_xref="GOA:Q80PA6"
FT                   /db_xref="InterPro:IPR000657"
FT                   /db_xref="UniProtKB/TrEMBL:Q80PA6"
FT                   /protein_id="CAD67489.1"
FT                   /translation="MDSRTGENITAHQAENPVFIWEVPNPLYFKIMRVEDPAYTRTRIY
FT                   HIQVRFNHNLRKALDLHKAFLNFQVWTTSIQASGTTYLNRFRHLVLLYLHRLGVIGINN
FT                   VIRAVQFATDKSYVNTVLENHEIEYKFY"
FT   CDS             complement(1094..1612)
FT                   /gene="trap"
FT                   /product="trans-activating protein"
FT                   /db_xref="GOA:Q80PA5"
FT                   /db_xref="InterPro:IPR000942"
FT                   /db_xref="UniProtKB/TrEMBL:Q80PA5"
FT                   /protein_id="CAD67490.1"
FT                   /translation="MESRFKLKEEYHQSCCAIQVRVPVIKTSSTKKKTELYTTGLFIMR
FT                   SSSPSQPPSIKAQHRIAKRKAIRRRRIDLNCGCSIFYHIKCADHGFTHRGEHHCASGRE
FT                   SRFYLGGTKSPLFQDHAGGRSSIHTDKDIPHPSQVQSQPQESTGSPQSIPELPSLDDID
FT                   SSFWDDIFK"
FT   CDS             complement(1419..2480)
FT                   /gene="rep"
FT                   /product="replication associated protein"
FT                   /db_xref="GOA:Q80PA4"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/TrEMBL:Q80PA4"
FT                   /protein_id="CAD67491.1"
FT                   /translation="MPPPQRFRVQSKNYFLTYPRCSIPKEEALSQLQKIHTATNKKFIK
FT                   VCEERHENGEPHLHALIQFEGKFVCTNKRLFDLVSSTRSTHFHPNIQGAKSSSDVKKYI
FT                   DKDGVTIEWGQFQVDGRSARGGQQSANDSYAKALNADSIESALTILKEEQPKDYVLHNH
FT                   NIRSNLERIFVKAPEPWVPPFPLSSFINVPVVMQEWVDDYFGRGSAARPERPISIIVEG
FT                   DSRTGKTMWARALGPHNYLSGHLDFNSRVYSNAVKYNVIDDISPNYLKLKHWKELIGAQ
FT                   KDWQSNCKYGKPVQIKGGIPPIVLCNPGEGSSYKDFLDKEENRALHNWTIHNAIFVTLT
FT                   APLYQSTAQDCQT"
XX
SQ   Sequence 2644 BP; 705 A; 528 C; 596 G; 815 T; 0 other;
     accggattgc cgcccgcgcc cctttatttc cgtacgcttt cacgtgccgc tttaatttaa        60
     atttcacatg tattttttga ctgaccaatg atattgcgtt tgacgagcct agatatttgt       120
     aaaacttggt gactaagttt tacctttgct tataaattta aattaaattg atgcccattc       180
     cacgtgtaag tccagaatgc ctaagcgtga tgcgccatgg cgtcaaatgg cgggaaccta       240
     caaggtttcc cgttctggca attattcacc agggagtgga atgggctcaa aatccaacaa       300
     ggccaatgca tgggtcaaca ggcccatgta taggaagccc aggatatatc ggatgtacag       360
     aagcccagat gtacccaagg gatgtgaagg accttgtaag gtccaatctt atgaacaacg       420
     acatgatatt tctcatgttg gtaaggtgat gtgtatatcc gatattactc gtggtaatgg       480
     tattacccat cgtgtgggta aacgtttttg tgttaagtct gtgtatattt tagggaagat       540
     ttggatggat gaaaatatca agctcaagaa tcacacgaac agtgtgatat tttggttagt       600
     tcgggaccgt agaccatacg gcacgcctat ggattttgga caagtgttta acatgtttga       660
     caatgaacct agcactgcga cggtaaagaa tgatcttcgt gatcgttatc aagttatgca       720
     tcgattcaat gcaaaggtga ctggtggtca atatgcaagc aacgagcaag ccttggtaag       780
     gcgattttgg aaggtgaaca atcatgtcgt ctataaccac caggaagcag gaaaatacga       840
     gaatcatacg gaaaatgcgt tattgttgta tatggcatgt acacatgcat ctaatcctgt       900
     atatgcgaca ttgaaaattc ggatctattt ctatgattcg ataaccaatt aataaaattt       960
     atattctatt tcatgattct caagtacagt atttacatat gatttgtctg ttgcgaactg      1020
     aacagctcga atgacattgt ttattcctat tacgcctaac ctatgtaaat acaataaaac      1080
     caaatgtcta aatctattta aatatgtcgt cccagaagct tgaatcgatg tcgtccagac      1140
     ttggaagttc aggaatgctt tgtggagatc cagtgctttc ctgaggttgt gattgaacct      1200
     gacttggatg tggtatatcc ttgtccgtgt gtatgctgga tcttccaccc gcatgatctt      1260
     gaaataaagg ggatttggta cctcccaaat aaaaacggga ttctctgcct gatgcgcagt      1320
     gatgttctcc cctgtgcgtg aatccatgat ctgcgcactt gatatggtaa aatatggaac      1380
     agccgcagtt caagtcaatg cgtcgtcgac gaatggcttt acgtttggca atcctgtgct      1440
     gtgctttgat agaggggggc tgtgagggtg acgaagatcg cattatgaat agtccagttg      1500
     tgtaaagctc ggttttcttc tttgtcgagg aagtctttat aactggaacc ctcacctgga      1560
     ttgcacagca cgattggtgg tattcctcct ttaatttgaa ccggctttcc atatttacag      1620
     tttgattgcc agtccttttg tgccccaatt agttctttcc agtgctttaa cttcaaataa      1680
     ttggggctta tgtcatcaat gacgttgtat ttcactgcgt tggaatagac acgtgaatta      1740
     aagtccaagt gaccgctcaa ataattatgt ggtcctaaag cacgagccca cattgtcttt      1800
     ccggttcgtg aatcaccctc gacgatgata ctaataggtc tctccggccg cgcagcggaa      1860
     ccccttccga aatagtcgtc aacccattct tgcataacaa ccggaacatt gatgaatgat      1920
     gacaacggaa atggaggaac ccatggttcc ggcgctttga cgaagatccg ttcgagatta      1980
     gaacggatgt tgtgattatg aaggacgtaa tctttcggtt gttcttcctt taatatcgtc      2040
     aaggcagatt caattgaatc tgcgttcaat gcctttgcat atgagtcgtt ggcagactgc      2100
     tgacctcctc ttgcagatct gccgtcgact tggaattgtc cccattcgat tgtgactcca      2160
     tctttgtcga tgtatttctt gacgtctgaa cttgatttag ctccctgaat gttcggatgg      2220
     aaatgtgttg acctggttga ggataccagg tcgaacaatc ttttatttgt gcagacgaat      2280
     ttaccttcga actgaataag cgcatgaaga tggggttcac cattctcgtg acgttcctca      2340
     cagaccttga tgaatttttt attcgtggct gtatgaatct tctgaagttg cgaaagagct      2400
     tcttctttcg gtatagagca acggggataa gtgaggaaat agtttttgga ctgaactcta      2460
     aatctttgag gtggtggcat atttgtaaat atgcgagtgt ctccgaatga gtttgcgagt      2520
     gtctccaatt gagccccctc aaacttacgc tatgcaattg gagactggag tacaatatat      2580
     actagaaccc ttaatctctc tatttatcag attcacacac ggggcggcca tccgatataa      2640
     tatt                                                                   2644
//