ID AJ543429; SV 1; circular; genomic DNA; STD; VRL; 2763 BP. XX AC AJ543429; XX DT 04-FEB-2005 (Rel. 82, Created) DT 15-APR-2005 (Rel. 83, Last updated, Version 2) XX DE Honeysuckle yellow vein virus-[UK2], complete genome XX KW AC1 gene; AC2 gene; AC2 protein; AC3 gene; AC3 protein; AC4 gene; KW AC4 protein; AV1 gene; AV2 gene; AV2 protein; coat protein; KW replication-associated protein. XX OS Honeysuckle yellow vein virus-[UK2] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2763 RA Stanley J.; RT ; RL Submitted (07-FEB-2003) to the INSDC. RL Stanley J., Department of Disease and Stress Biology, John Innes Centre, RL Norwich Research Park, Colney, Norwich, NR4 7UH, UNITED KINGDOM. XX RN [2] RA Stanley J.; RT "Aetiology of honeysuckle yellow vein disease"; RL Unpublished. XX DR MD5; e192ac5df5b10234ba981afe149e1aa2. XX FH Key Location/Qualifiers FH FT source 1..2763 FT /organism="Honeysuckle yellow vein virus-[UK2]" FT /host="Lonicera japonica var. aureoreticulata" FT /mol_type="genomic DNA" FT /country="United Kingdom:Norfolk, Deopham" FT /db_xref="taxon:240867" FT CDS 138..488 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:Q5GR63" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q5GR63" FT /protein_id="CAD65892.1" FT /translation="MWDPLVNDFPETVHGFRCMLAVKYLLLVESTYAPDTVGYDLVRDL FT IGVVRAKNYVEASCRYRNFHTRLQGTAPSELRQPVCQPCECPHCPRHKQKEIMGSAAHV FT SEVQDVQNVQKS" FT CDS 298..1071 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:Q5GR62" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q5GR62" FT /protein_id="CAD65893.1" FT /translation="MSKRPADIGIFTPVSKVRRRLNFDSPYVSRASAPIALVTNKRRSW FT AQRPMYRKSRMYRMYRSPDVPKGCEGPCKVQSFETKNDVGRSGTLLCVSDITRGNGLTH FT RVGKRFCIKSVYIIGKIWMDDNIKTNNHTNNVLFWLVRDRRPGSTPYGFQEAFNMIQNE FT PSTATIKQELRDRLQVLHRFSATVTGGQYVSKEQAIIKRFWKLNHHVTYNHQEQAKYEN FT HTENALLLYMACTHASSPVYATLKIRVYFYDSVQN" FT CDS complement(1068..1472) FT /gene="AC3" FT /product="AC3 protein" FT /db_xref="GOA:Q5GR61" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q5GR61" FT /protein_id="CAD65894.1" FT /translation="MDSRTGDTITAAQARNGAYTWTVPNPLYFKITTHAQRPFNMDQDI FT ITLQIRFNHNLRNQLHIHKCFLSFKIWTRLHPQTLHFLRVFRTQVLKYLDNLGVISINN FT VIRAVDHVLYNVFEGTEYVQQFTDIKFKLY" FT CDS complement(1213..1620) FT /gene="AC2" FT /product="AC2 protein" FT /db_xref="GOA:Q5GR60" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q5GR60" FT /protein_id="CAD65895.1" FT /translation="MQPSSPSTAHSTQVPIKVRHRSEKRRAPRRRRIDLNCGCSIYVAL FT GCANHGFTHRGHHHCSSGKEWRVYLDSAQSPIFQNHDTRATAIQHGSGYNNFTDTIQPQ FT PQESTAHTQVLPLFQDLDSLTSSDFAFLEGI" FT CDS complement(1520..2611) FT /gene="AC1" FT /product="replication-associated protein" FT /db_xref="GOA:Q5GR59" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q5GR59" FT /protein_id="CAD65896.1" FT /translation="MPRAGRFSLKAKNYFLTYPQCSIDKEEALTQLQKLNTPTNIKFIR FT ICRELHQNGSPHLHVLIQFEGKYNCTNQRFFDLVSPNRSAHFHPNIQAAKSSSDVKTYM FT EKDGDIVDFGVFQVDGRSARGGCQSANDAYAEAISSGSKSSALCILREKAPKDFVLQFH FT NLNSNLDRIFAPPLEEFVSPFLSSSFDQVPEQLEEWAAENVRDSAARPWRPISIVIEGD FT SRTGKTMWARSLSPRHNYLCGHLDLSPKVYSNEAWYNVIDDVDPHYLKHFKEFMGAQRD FT WQSNTKYGKPIQIKGGIPTIFLCNPGPTSSYTEYLDEDKNAALKAWAIKNATFVTLYGP FT LYSGTHQGATQIREEESTSPEED" FT CDS complement(2161..2454) FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q5GR58" FT /protein_id="CAD65897.1" FT /translation="MGALISTSSSSSRGNTTAQINDSSTSYPQTGQHISIQTFRRLKAR FT QMSRPIWRKTETSLILECSRSMEDQLEEVASLPTTRMPRQSAQDLSHRHSVY" XX SQ Sequence 2763 BP; 712 A; 563 C; 654 G; 834 T; 0 other; accggatggc cgcccgaaat ttcgtggtgg tcccccccat gtcggccaat gaataacgtg 60 ccttgaatgt tagataagtg gaaagtgacg tttgcttttg tctttatata cgtcagccct 120 aattttaacg gtgtaagatg tgggatcctt tagttaacga tttccctgaa accgttcacg 180 gttttaggtg tatgttagcg gttaagtacc tcctacttgt tgaatctacg tacgctccag 240 atactgttgg gtacgatctt gtacgcgatc ttattggagt tgttcgagct aagaactatg 300 tcgaagcgtc ctgcagatat aggaattttc acacccgtct ccaaggtacg gcgccgtctg 360 aacttcgaca gcccgtatgt cagccgtgcg agtgccccca ttgccctcgt cacaaacaaa 420 aggagatcat gggctcagcg gcccatgtat cggaagtcca ggatgtacag aatgtacaga 480 agtcctgatg ttcccaaggg gtgtgaaggt ccgtgtaagg tacagtcatt tgagacgaag 540 aatgatgttg ggcgttctgg tactctgctt tgtgtttctg atatcacccg tggtaatgga 600 cttactcatc gtgttgggaa gagattttgt ataaaatctg tttatattat tggtaaaatc 660 tggatggatg acaatattaa gacgaacaat cacactaaca acgtgttatt ctggttagtt 720 agggatagac gtcctggttc aactccttat ggattccaag aggcattcaa tatgattcaa 780 aatgaaccca gtacagccac tattaaacag gagttgagag atcgtttgca ggtgttacat 840 aggttcagtg cgactgttac aggtggacaa tatgtgtcca aggaacaagc tatcatcaag 900 aggttctgga agttgaatca tcatgtcact tacaatcatc aggagcaagc taaatatgag 960 aaccatactg aaaacgcttt gttattgtat atggcgtgta ctcatgccag tagtccagtg 1020 tatgccacat taaaaatcag agtgtatttc tacgattcag tacaaaatta ataaagctta 1080 aattttatat ctgtaaattg ttgtacatat tcagttcctt cgaatacatt atataataca 1140 tgatctactg ctctaattac attgttaatt gatattacac ccaaattatc taagtacttc 1200 aacacttgtg tcctaaatac cctcaagaaa tgcaaagtct gaggatgtaa gcgagtccaa 1260 atcttgaaag agaggaagca cttgtgtatg tgcagttgat tcctgaggtt gtggttgaat 1320 cgtatctgta aagttattat atcctgatcc atgttgaatg gccgttgcgc gtgtgtcgtg 1380 attttgaaat ataggggatt gggcactgtc caggtatacg cgccattcct tgcctgagct 1440 gcagtgatgg tgtcccctgt gcgtgaatcc atgatttgca caccccaatg cgacgtaaat 1500 agaacacccg cagttcagat caatcctcct ccggcgaggt gctctcctct tctctgatct 1560 gtgtcgcacc ttgatgggta cctgagtaga gtgggccgta gagggtgacg aaggttgcat 1620 ttttaattgc ccaggctttt agggcagcat tcttgtcctc gtctaaatac tcggtgtatg 1680 atgacgttgg gcctggattg cagaggaaga ttgttgggat acctccttta atttgaattg 1740 gtttcccgta cttggtgttg ctttgccagt ccctttgggc ccccatgaac tctttaaagt 1800 gctttagata gtggggatcc acgtcatcaa tgacgttgta ccaggcctca ttgctgtaaa 1860 ccttggggct taagtcaaga tggccgcaaa ggtagttatg acgtggactc aaagacctgg 1920 cccacatggt cttccctgtc ctgctatccc cttctatcac aatgctaatg ggcctccatg 1980 gccgcgcagc ggaatccctg acgttctcgg cagcccattc ctcaagttgc tctggaactt 2040 gatcaaatga agaagataaa aaaggagaaa caaattcctc caacggagga gcaaaaatcc 2100 tatctaaatt gctatttaaa ttatgaaact gtaaaacaaa atctttggga gctttctccc 2160 ttaatataca gagtgccgat gacttagatc ctgagctgat tgcctcggca tacgcgtcgt 2220 tggcagactg gcaacctcct ctagctgatc ttccatcgac ctggaacact ccaaaatcaa 2280 cgatgtctcc gtctttctcc atataggtct tgacatctga cgagctttta gccgcctgaa 2340 tgtttggatg gaaatgtgct gacctgtttg gggatacgag gtcgaagaat cgttgatttg 2400 tgcagttgta tttcccctcg aactggatga ggacgtggag atgagggctc ccattttgat 2460 gtagctctct gcagatcctt atgaatttaa tgttagttgg tgtgtttaat ttttgtaatt 2520 gggttagggc ttcttctttg tcgatggagc attgtgggta tgtgaggaaa taatttttgg 2580 cttttaaaga gaaacgccca gctctaggca tgttgacttg gtcaattggg gggcacttca 2640 aactcctgct gaatgggggg gcattggggg gcaatttata ttctgggggg catggcatta 2700 ttgtaattac ttcaacttta aattcaaaat tcaaattggt aaagcggcca tccgtataat 2760 att 2763 //