ID AJ542539; SV 1; circular; genomic DNA; STD; VRL; 2740 BP. XX AC AJ542539; XX DT 05-FEB-2003 (Rel. 74, Created) DT 15-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Hollyhock leaf crumple virus - [Cairo2] complete genome, clone H90-7 XX KW C1 gene; C2 gene; C3 gene; C4 gene; V1 gene; V2 gene; C2 protein; KW C3 protein; C4 protein; V2 protein; coat protein; complete genome; KW replication associated protein. XX OS Hollyhock leaf crumple virus - [Cairo2] OC Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; OC Geplafuvirales; Geminiviridae; Begomovirus; Cotton leaf curl Gezira virus. XX RN [1] RP 1-2740 RA Briddon R.W.; RT ; RL Submitted (05-FEB-2003) to the INSDC. RL Briddon R.W., Dept. of Disease and Stress Biology, John Innes Centre, RL Colney Lane, Norwich, NR4 7UH, UNITED KINGDOM. XX RN [2] RA Briddon R.W.; RT "Diversity of begomoviruses asscociated with DNA beta"; RL Unpublished. XX DR MD5; e566884f90c78492b429a133b1683390. XX FH Key Location/Qualifiers FH FT source 1..2740 FT /organism="Hollyhock leaf crumple virus - [Cairo2]" FT /host="Althea rosea" FT /mol_type="genomic DNA" FT /country="Egypt:Cairo" FT /clone="H90-7" FT /tissue_type="leaf" FT /db_xref="taxon:269096" FT CDS 139..507 FT /gene="V2" FT /product="V2 protein" FT /db_xref="GOA:Q80P81" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q80P81" FT /protein_id="CAD62691.1" FT /translation="MWDPLVNDFPATVHGFRCMLAIKYIQAVRSEYDPGSLGFDLLSDL FT IGVLRAGNYVEATGRYHNFHSRLEGTTSSELRQPYAVRCSCSHCPRHKQTQSVVQQTQL FT QEAQNVQNVSEPRCPKGV" FT CDS 299..1075 FT /gene="V1" FT /product="coat protein" FT /function="required for encapsidation and transmission to FT insect" FT /db_xref="GOA:Q80P80" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q80P80" FT /protein_id="CAD62692.1" FT /translation="MSKRPADIIISTPASKVRRRLNFDSPMQSGVRAPTVLVTNKRRAW FT SNRPNYRKPRMYRMYRSPDVPKGCEGPCKVQSYEQRDDVKHTGIVRCVSDVTKETGLTH FT RTGKRFTVKSIYILGKIWMDENIKKQNHTNNVMFFLVRDRRPYGNSPMDFGQVFNMFDN FT EPGTATIKNDYRDRFQVMRKFSATVTGGPSGMKEQALVRRFFKINSQVVYNHQEAAKYE FT NHTENALLLYMACTHASNPVYATLKIRIYFYDSVSN" FT CDS complement(1072..1473) FT /gene="C3" FT /product="C3 protein" FT /db_xref="GOA:Q80P79" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q80P79" FT /protein_id="CAD62693.1" FT /translation="MDSRTGELITAHQTENGVLIWTINNPLYFKTIKEIRLTHGNQTMV FT EMQIRFNYNLRKELDAYKCFMNFRVWTISRPPIGLFLNVFRKQIIKYLYRIGVISINNV FT IRAVNHVLYDVLQTTVASEFTHNIQMKLY" FT CDS complement(1217..1621) FT /gene="C2" FT /product="C2 protein" FT /db_xref="GOA:Q80P78" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q80P78" FT /protein_id="CAD62694.1" FT /translation="MRPSSPSQIRCTQVPIKVQHREAKKRAIRRRRIDIPCGCTVYVAI FT TCRDNGFTHRGTHHCASDREWRTYLDNQQSPVFQNHKGNSSNARESNNGRDADKIQLQP FT QEGIGRVQMFHELQGLDDLTPSDWSFLKRI" FT CDS complement(1521..2609) FT /gene="C1" FT /product="replication associated protein" FT /function="required for initiation of rolling-circle FT replication" FT /db_xref="GOA:Q80P77" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q80P77" FT /protein_id="CAD62695.1" FT /translation="MAPPHRFQIYAKNYFLTFPKCSLTKEEALEQIQQISTASNKKYIK FT ICRELHEDGQPHLHVLLQFEGKFKCQNQRLFDLVSPNRSAHFHPNIQGAKSSSDVKSYI FT DKDGDTLEWGEFQIDGRSARGGQQTANDAYAAALNAGSKAEALRVIRELAPKDFVLQFH FT NLNSNLERIFQEPPAPYVSPFLSSSFDQVPEELEEWAAENVVEAAARPSRPISIVIEGE FT SRTGKTVWARSLGPHNYLCGHLDLSPKVFSNDAWYNVIDDVDPHYLKHFKEFMGAQKDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEYLEEDKNAHLKSWALKNATFITLSNPL FT YSGTNQSPASGGQEESNQETQD" FT CDS complement(2159..2452) FT /gene="C4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q80P76" FT /protein_id="CAD62696.1" FT /translation="MANLIYMCFSSSKGSSSAKIRDSSTWSPQIGQHISIQTFRELNPA FT PTSSPTSTRMETHWNGENSRSTEDLQEEDNRPPMTLTPQRLTQEVRQRLLGL" XX SQ Sequence 2740 BP; 693 A; 573 C; 623 G; 851 T; 0 other; accggtgggc gcgaaaaaaa aaagtggtcc cccccacgtg aaaatgtcgc gcgatgctgt 60 ccaatcagaa cgcgcgctct acgcattata atttgaaatt tgaaatataa acttggtccc 120 taagtagttg aaattaaaat gtgggatcct ttggtgaatg atttcccggc aaccgtgcac 180 ggttttcggt gtatgttagc tataaaatat attcaggcag ttaggtccga atacgatccc 240 ggtagtttag ggtttgattt attgtctgat ttaataggtg ttcttcgtgc tgggaattat 300 gtcgaagcga ccggcagata tcataatttc cactcccgcc tcgaaggtac gacgtcgtct 360 gaacttcgac agccctatgc agtccggtgt tcgtgctccc actgtcctcg tcacaaacaa 420 acgcagagcg tggtccaaca gacccaatta caggaagccc agaatgtaca gaatgtatcg 480 gagcccagat gtcccaaagg ggtgtgaagg tccatgtaag gtccagtcct atgaacagcg 540 tgatgatgtg aagcatactg gtattgttcg ttgtgtttct gatgtgacca aggaaactgg 600 gcttacgcat cgtactggta aaaggtttac tgtgaagtcc atttacatat tggggaaaat 660 atggatggat gaaaatatca agaagcagaa tcatactaac aatgttatgt ttttcttggt 720 ccgagataga aggccctatg gtaatagtcc tatggatttt ggacaggttt ttaatatgtt 780 tgataatgag cccggtactg ctactataaa gaatgattat cgagatcgtt tccaggtgat 840 gcgtaagttt agtgcaacgg taactggtgg tccttctggg atgaaggaac aggctcttgt 900 tcgtaggttt tttaagatta atagtcaggt tgtgtataac catcaggaag ctgcgaagta 960 tgagaaccat actgagaatg ctttgctgtt gtatatggca tgtactcatg cttctaatcc 1020 tgtgtatgct acgttaaaga tacggatcta cttctacgat tcggtatcta attaatataa 1080 tttcatttga atattgtggg tgaattcact tgccacggtt gtttgcaata catcgtacaa 1140 aacgtgattg actgccctaa ttacattgtt aattgaaatt actcctattc tatacaaata 1200 ttttataatc tgcttcctaa atacgtttaa gaaaagacca atcggagggc gtgagatcgt 1260 ccagaccctg aagttcatga aacatttgta cgcgtccaat tccttcctga ggttgtagtt 1320 gaatcttatc tgcatctcta ccattgtttg attcccgtgc gttagacgaa tttcctttat 1380 ggttttgaaa tacaggggat tgttgattgt ccagataagt acgccattct ctgtctgatg 1440 cgcagtgatg agttcccctg tgcgtgaatc cattgtctct gcacgtgatg gctacgtata 1500 ccgtgcaacc acaagggatg tcaatcctgc gtctcctgat tgctctcttc ttggcctccc 1560 gatgctggac tttgattggt acctgagtac agcggatttg agagggtgat gaaggtcgca 1620 ttctttaatg cccaggattt gagatgcgcg ttcttgtcct cctctaaata ctctttatat 1680 gaggaattgg gacctggatt gcagaggaag attgttggga tgcccccttt aatttgaact 1740 ggcttcccgt attttgtgtt gctttgccag tccttttgtg cacccatgaa ctccttaaag 1800 tgtttcagat aatgcgggtc aacatcatct atgacgttat accatgcgtc attactgaac 1860 acctttgggc tcagatcaag atgcccgcac agataattgt gaggcccaag acttctggcc 1920 catactgtct tccctgttct gctttcccct tcaatcacta tactaatcgg tctacttggc 1980 cgcgcagcgg cctcaacgac gttctccgcc gcccattctt caagttcttc tggaacttgg 2040 tcgaacgaag aagacaaaaa aggagaaaca taaggagctg gaggctcctg aaaaatcctc 2100 tctaaattac tatttaaatt atgaaattgt aaaacaaaat ctttgggagc taactccctt 2160 ataaccctaa gagcctctgc cttacttcct gcgttaagcg ctgcggcgta agcgtcattg 2220 gcggtctgtt gtcctcctct tgcagatctt ccgtcgatct ggaattctcc ccattccagt 2280 gtgtctccat ccttgtcgat gtaggacttg acgtcggagc tggatttagc tccctgaatg 2340 tttggatgga aatgtgctga cctatttggg gagaccaggt cgaagagtct ctgattttgg 2400 cacttgaact tcccttcgaa ctggagaagc acatgtagat gaggttggcc atcctcgtga 2460 agctctctgc agatcttgat atatttcttg tttgaagctg tgcttatttg ctgtatttgc 2520 tctagggctt cctcttttgt tagagaacat tttgggaaag ttaggaaata attcttggca 2580 tatatttgga atctgtgggg aggagccatt gacttggtca atcggtactc agatgcttct 2640 ctccaatata tcggtactca atatatagtg agtaccaaat ggcattttgg taaaaatccc 2700 aataattttg aacccccata gcgcccaccg ttctaatatt 2740 //