ID   AJ539132; SV 1; linear; genomic RNA; STD; VRL; 1814 BP.
XX
AC   AJ539132;
XX
DT   01-APR-2003 (Rel. 75, Created)
DT   31-OCT-2003 (Rel. 77, Last updated, Version 2)
XX
DE   Sweet potato feathery mottle virus gene for polyprotein, genomic RNA,
DE   isolate TZ2
XX
KW   coat protein; CP; NIb protein; nuclear inclusion body protein; polyprotein.
XX
OS   Sweet potato feathery mottle virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1814
RA   Mukasa S.B.B.;
RT   ;
RL   Submitted (28-JAN-2003) to the INSDC.
RL   Mukasa S.B.B., Plant Biology, Uppsala Genetics Centre, Box 7080, Uppsala,
RL   SE-750 07, SWEDEN.
XX
RN   [2]
RX   DOI; 10.1023/A:1025172402230.
RX   PUBMED; 12913357.
RA   Mukasa S.B., Tairo F., Kreuze J.F., Kullaya A., Rubaihayo P.R.,
RA   Valkonen J.P.T.;
RT   "Coat protein sequence analysis reveals occurrence of new strains of Sweet
RT   potato feathery mottle virus in Uganda and Tanzania";
RL   Virus Genes 27(1):49-56(2003).
XX
DR   MD5; b682200047965d7f8195f01fd89c8b6e.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1814
FT                   /organism="Sweet potato feathery mottle virus"
FT                   /host="Ipomoea batatas cultivar Karota"
FT                   /strain="EA"
FT                   /isolate="TZ2"
FT                   /mol_type="genomic RNA"
FT                   /country="Tanzania:Bagamoyo"
FT                   /db_xref="taxon:12844"
FT   CDS             <1..1593
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q80MW1"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:Q80MW1"
FT                   /protein_id="CAD62247.1"
FT                   /translation="GNNSGQPSTVVDNTLMVVLAVHYTLLKLGIQESEFDKCCVFFANG
FT                   DDLLLAVRPDTAHLLDKFSECFSELGLNYDFSSRTNKKEDLWFMSHCGVKRDGIFIPKL
FT                   EPERIVSILEWDRSHEPIHRLEAICAAMVESWGYDELLHHIRKFYAWVLDQAPYNELAR
FT                   NGKAPYIAETALKALYTGVQPNASELSAYTRVLKEMYDDSMLQENDLEVYHQSNERTEF
FT                   KDAGANPPAPKPKDIPPPPTITEITDTEDPKQAALKAARAKQPAVIPESYGRDTGKERE
FT                   SIVGTSSKGVRDKDVNVGTVGTFVVPRVRMNANKKRQPMVNGRAIINFQHLSTYEPEQF
FT                   EVANTRSTQEQFQAWYEGVKGDYGVDDTGMGILLNGLMVWCIENGTSPNINGVWTMMDG
FT                   NEQVTYPIKPLLDHAVPTFSQIMTHFSDVAEANIEMRTRTKAYMPRYVLQRNLTDMSLA
FT                   RYAFDFYELHSTTPARAKEAHLQMKAAALKNARNRLFGLDGNVSTQEEDTERHTTTDVT
FT                   RNIHNLLGMRGVQ"
FT   mat_peptide     <1..645
FT                   /product="nuclear inclusion body protein"
FT                   /note="NIb"
FT   mat_peptide     646..1590
FT                   /product="coat protein"
FT                   /note="CP"
XX
SQ   Sequence 1814 BP; 565 A; 342 C; 431 G; 476 T; 0 other;
     gggaataaca gtgggcagcc atccactgtg gttgataata cacttatggt tgtgttagca        60
     gttcactata cactgttgaa actaggaatc caagaaagcg agtttgataa atgctgtgtc       120
     tttttcgcaa atggcgatga tttattgttg gcagtgaggc cagatacagc ccatttactg       180
     gataagttta gcgaatgctt ttctgaatta ggactcaatt atgacttttc atcgcgaaca       240
     aataagaaag aagatctatg gtttatgtca cactgtggcg tgaaacgtga tggaatattt       300
     attccgaagt tggagcctga aaggattgtt tcaattcttg aatgggatcg ttcacacgag       360
     ccaattcatc gactggaagc aatatgtgcc gctatggtgg aatcatgggg ttatgatgaa       420
     cttcttcatc atattaggaa attctatgca tgggttttgg accaagcccc atacaatgaa       480
     ctagcacgaa atgggaaagc accatatata gctgaaactg cactcaaagc actctacact       540
     ggtgttcaac ctaatgcttc tgaattgagt gcatatacga gagtactcaa agaaatgtat       600
     gatgacagta tgctccagga gaatgatttg gaagtatatc atcaatctaa tgagcgcact       660
     gaatttaaag atgcaggagc gaaccctcca gcccctaagc ctaaggacat tcctccacca       720
     cccacaataa ccgagatcac tgatacagag gacccgaagc aggcagcttt gaaagctgca       780
     cgagcaaagc aacccgcagt cattccagaa tcatatggac gagacacggg caaagaaagg       840
     gagtcaatag tggggacatc atcaaagggt gtgagggaca aagatgtaaa tgttggcacc       900
     gttggtacat ttgtcgtgcc acgtgtcagg atgaatgcaa acaagaaaag gcaaccaatg       960
     gttaatggaa gggccattat aaatttccag cacttgtcaa catatgaacc agagcagttt      1020
     gaggttgcaa acacccggtc gactcaagaa cagttccaag catggtatga aggagttaaa      1080
     ggggattatg gtgttgacga cacagggatg gggatcttat tgaatggact aatggtttgg      1140
     tgcattgaaa atggtacatc cccaaatata aatggtgtgt ggacaatgat ggatggtaat      1200
     gagcaagtaa catatccaat taaaccatta ctggaccatg cagtgcctac ttttagccag      1260
     attatgacgc acttcagtga cgttgctgaa gctaacatag agatgcgaac ccgtacaaag      1320
     gcatacatgc caaggtacgt tctacaacgt aatttgactg atatgagtct tgcgcgatat      1380
     gcatttgatt tttacgagct gcattcaact acacctgcac gtgctaaaga agcacattta      1440
     cagatgaagg cagccgcact taagaatgcg cgaaatcggt tgtttggttt ggacggaaac      1500
     gtctccacgc aagaagaaga tacggagagg cacacgacaa ctgatgttac tagaaatata      1560
     cataacctct taggaatgag gggtgtgcaa taggacatcc tctgcactgt agcttatact      1620
     tatgtcattt ttagtatgcc tttaatttaa attcgtgtct ttcagtcccg aaggagatgg      1680
     ttgaatgcat aacatggtgg gattatatct cggttattgc atttgagaag tcacctttct      1740
     attacgtatc ataagggact cttaaaagtg aggagtacct cgtaagaaaa gcctttttgg      1800
     ttcgtgatcg agcc                                                        1814
//