ID   AJ539131; SV 1; linear; genomic RNA; STD; VRL; 1814 BP.
XX
AC   AJ539131;
XX
DT   01-APR-2003 (Rel. 75, Created)
DT   31-OCT-2003 (Rel. 77, Last updated, Version 2)
XX
DE   Sweet potato feathery mottle virus gene for polyprotein, genomic RNA,
DE   isolate TZ1
XX
KW   CP; NIb protein; polyprotein; coat protein; nuclear inclusion body protein.
XX
OS   Sweet potato feathery mottle virus
OC   Viruses; Riboviria; Orthornavirae; Pisuviricota; Stelpaviricetes;
OC   Patatavirales; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1814
RA   Mukasa S.B.B.;
RT   ;
RL   Submitted (28-JAN-2003) to the INSDC.
RL   Mukasa S.B.B., Plant Biology, Uppsala Genetics Centre, Box 7080, Uppsala,
RL   SE-750 07, SWEDEN.
XX
RN   [2]
RX   DOI; 10.1023/A:1025172402230.
RX   PUBMED; 12913357.
RA   Mukasa S.B., Tairo F., Kreuze J.F., Kullaya A., Rubaihayo P.R.,
RA   Valkonen J.P.T.;
RT   "Coat protein sequence analysis reveals occurrence of new strains of Sweet
RT   potato feathery mottle virus in Uganda and Tanzania";
RL   Virus Genes 27(1):49-56(2003).
XX
DR   MD5; 5906f4f8c29a37834ef16c080822e24e.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1814
FT                   /organism="Sweet potato feathery mottle virus"
FT                   /host="Ipomoea batatas cultivar Mavuno"
FT                   /strain="EA"
FT                   /isolate="TZ1"
FT                   /mol_type="genomic RNA"
FT                   /country="Tanzania:Bagamoyo"
FT                   /db_xref="taxon:12844"
FT   CDS             <1..1593
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q80MW2"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:Q80MW2"
FT                   /protein_id="CAD62246.1"
FT                   /translation="GNNSGQPSTVVDNTLMVVLAVHYTLLKLGIQESEFDKCCVFFANG
FT                   DDLLLAMRPDTAHLLDKFGECFSELGLNYDFSSRTNKKEDLWFMSHCGVKRDGIFIPKL
FT                   EPERIVSILEWDRSHEPIHRLEAICAAMVESWGYDELLHHIRKFYAWVLDQAPYNELAR
FT                   NGKAPYIAETALKALYTGVQPNASELSAYTRVLKEMYDDSMLQENDLEVYHQSNERTEF
FT                   KDAGANPPAPKPKDIPPPPTITEITDPEDPKQAALKAARAKQPAVIPESYGRDTSKERE
FT                   SIVGTSSKGVKDKDVNVGTVGTFVVPRVKMNANKKRQPMVNGRAIINFQHLSTYEPEQF
FT                   EVANTRSTQEQFQAWYEGVKGDYGVDDTGMGILLNGLMVWCIENGTSPNINGVWTMMDG
FT                   DEQVTYPIKPLLDHAVPTFRQIMTHFSDVAEAYIEMRNRTKAYMPRYGLQRNLTDMSLA
FT                   RYAFDFYELHSTTPARAKEAHLQMKAAALKNARNRLFGLDGNVSTQEEDTERHTTTDVT
FT                   RNIHNLLGMRGVQ"
FT   mat_peptide     <1..645
FT                   /product="nuclear inclusion body protein"
FT                   /note="NIb"
FT   mat_peptide     646..1590
FT                   /product="coat protein"
FT                   /note="CP"
XX
SQ   Sequence 1814 BP; 569 A; 340 C; 432 G; 473 T; 0 other;
     gggaacaaca gcggacaacc atctactgtg gttgataata cacttatggt tgtgctagca        60
     gttcactaca cattgctgaa actaggaatc caagaaagcg agtttgataa atgctgtgtc       120
     tttttcgcaa atggtgatga tttattgtta gcaatgaggc cagatacagc ccatttactg       180
     gataagtttg gtgaatgttt ttctgaacta ggactaaatt atgacttttc atcacgaaca       240
     aataagaagg aagatctatg gtttatgtca cactgtggcg tgaaacgtga tggaatattt       300
     attccgaagt tggagcctga aaggattgtt tcaattcttg aatgggatcg ttcacacgag       360
     ccaattcatc gactggaagc aatatgtgcc gcgatggtgg aatcatgggg ttatgatgaa       420
     cttcttcatc acattaggaa attctatgca tgggttttgg accaagcccc atacaacgaa       480
     ctagcacgaa acgggaaagc accatacata gctgaaactg cactcaaagc actctatact       540
     ggtgttcaac ctaatgcctc tgaactgagt gcgtatacga gagtgcttaa agaaatgtat       600
     gatgatagca tgctccaaga gaatgatttg gaagtatatc atcaatctaa tgagagaact       660
     gaatttaaag atgcaggagc gaaccctcca gcccctaagc ctaaggacat tcctccacca       720
     cccacaataa ctgaaatcac tgatccagag gacccgaagc aggcagcttt gaaagctgca       780
     cgagcaaagc aacccgcggt cattccagag tcatatggac gagacacgag taaagaaagg       840
     gagtcaatag tggggacatc atcaaagggt gtgaaggata aagatgtgaa tgttggcacc       900
     gttggtacat ttgttgtgcc gcgtgtcaag atgaatgcaa ataagaaaag gcaaccaatg       960
     gtcaatggaa gggccattat aaatttccag cacttgtcaa catatgaacc agagcagttt      1020
     gaggttgcaa acacccgatc aactcaagaa cagttccaag catggtatga aggagttaaa      1080
     ggggattatg gtgttgacga cacagggatg gggatcttat tgaatggact aatggtttgg      1140
     tgcattgaaa atggcacatc cccaaatata aatggtgtgt ggacaatgat ggatggtgat      1200
     gaacaagtga catatccaat taaaccatta ctggaccatg cagtgcctac ttttaggcag      1260
     atcatgacgc acttcagtga cgttgctgaa gcttacatag agatgcgaaa ccgtacaaaa      1320
     gcatacatgc caaggtatgg tctacaacgt aatttgactg atatgagtct tgcgcgatat      1380
     gcatttgatt tttacgagct gcattcaact acacctgcac gtgctaagga agcacattta      1440
     cagatgaagg cagccgcact taagaatgcg cgaaatcggt tgtttggttt ggacggaaac      1500
     gtctccacgc aagaagaaga tacggagagg cacacgacaa ctgatgttac tagaaatata      1560
     cataacctct taggaatgag gggtgtgcaa taggacatcc tctgcactgt agcttatact      1620
     tatgttatct ttagtatgcc tttaatttaa attcgtgtct ttcagtcccg aaggagatgg      1680
     ttggatgcat aacatggtgg gattatatct cggttattgc atttgagaag tcacctttct      1740
     attacgtatc ataagggact cttaaaagtg aggagtacct cgtaagaaaa gcctttttgg      1800
     ttcgtgatcg agcc                                                        1814
//