ID   AJ539130; SV 1; linear; genomic RNA; STD; VRL; 1814 BP.
XX
AC   AJ539130;
XX
DT   01-APR-2003 (Rel. 75, Created)
DT   31-OCT-2003 (Rel. 77, Last updated, Version 2)
XX
DE   Sweet potato feathery mottle virus gene for polyprotein, genomic RNA,
DE   isolate Bny
XX
KW   coat protein; CP; NIb protein; nuclear inclusion body protein; polyprotein.
XX
OS   Sweet potato feathery mottle virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1814
RA   Mukasa S.B.B.;
RT   ;
RL   Submitted (28-JAN-2003) to the INSDC.
RL   Mukasa S.B.B., Plant Biology, Uppsala Genetics Centre, Box 7080, Uppsala,
RL   SE-750 07, SWEDEN.
XX
RN   [2]
RX   DOI; 10.1023/A:1025172402230.
RX   PUBMED; 12913357.
RA   Mukasa S.B., Tairo F., Kreuze J.F., Kullaya A., Rubaihayo P.R.,
RA   Valkonen J.P.T.;
RT   "Coat protein sequence analysis reveals occurrence of new strains of Sweet
RT   potato feathery mottle virus in Uganda and Tanzania";
RL   Virus Genes 27(1):49-56(2003).
XX
DR   MD5; 852fa34a6bc5487d3b34bbfa6c73a930.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1814
FT                   /organism="Sweet potato feathery mottle virus"
FT                   /host="Ipomoea batatas"
FT                   /strain="EA"
FT                   /isolate="Bny"
FT                   /mol_type="genomic RNA"
FT                   /country="Uganda:Bushenyi"
FT                   /db_xref="taxon:12844"
FT   CDS             <1..1593
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q80MW3"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:Q80MW3"
FT                   /protein_id="CAD62245.1"
FT                   /translation="GNNSGQPSTVVDNTLMVVLAVHYTLLKLGIQESEFNKCCVFFANG
FT                   DDLLLAMRPDTAYLLDKFGECFSELGLNYDFSSRTNKKEDLWFMSHCGVKRDGIFIPKL
FT                   EPERIVSILEWDRSHEPIHRLEAICAAMVESWGYDELLHHIRKFYAWVLDQAPYNELAR
FT                   NGQAPYIAETALKALYTGVQPNASELSAYTRVLKEMYDDSMLQENDLEVYHQSDERTEF
FT                   KDAGANPPAPKPKNVPPPPTITEITDPEDPKQAALKAERAKQPAVIPESYGRDTSKERE
FT                   SIVGASSKGVRDKDVNVGTVGTFVVPRVKMNANKKRQPMVNGRAIINFQHLSTYEPEQF
FT                   EVANTRSTQEQFQAWYEGVKGDYGVDDTGMGILLNGLMVWCIENGTSPNINGVWTMMDG
FT                   DEQVTYPIKPLLDHAVPTFRQIMTHFSDVAEAYIEMRNRTKAYMPRYGLQRNLTDMSLA
FT                   RYAFDFYELHSTTPARAKEAHLQMKAAALKNARNRLFGLDGNVSTQEEDTERHTTTDVT
FT                   RNIHNLLGMRGVQ"
FT   mat_peptide     <1..645
FT                   /product="nuclear inclusion body protein"
FT                   /note="NIb"
FT   mat_peptide     646..1590
FT                   /product="coat protein"
FT                   /note="CP"
XX
SQ   Sequence 1814 BP; 566 A; 331 C; 434 G; 483 T; 0 other;
     gggaataata gcggtcagcc atctactgtg gttgataata cacttatggt tgtgttagca        60
     gttcactaca cattgctgaa actaggaatc caagaaagcg agtttaataa atgctgtgtc       120
     tttttcgcaa atggtgatga tttattgttg gcaatgaggc cagatacagc ctatttactg       180
     gataagtttg gtgaatgttt ttctgaatta ggactcaatt atgacttttc atcacgaaca       240
     aataagaagg aagatctatg gtttatgtca cactgtggcg tgaaacgtga tggaatattt       300
     attccgaagt tggagcctga aaggattgtt tcaattcttg aatgggatcg ttcacacgaa       360
     ccaattcatc gactggaagc aatatgtgcc gcgatggtgg aatcatgggg ttatgatgaa       420
     cttcttcatc atattaggaa attctatgca tgggttttgg accaagcccc atacaatgaa       480
     ctagcacgaa atgggcaggc accatacata gctgaaactg cactcaaagc actctatact       540
     ggtgttcaac ctaatgcctc tgaattgagt gcgtatacga gagtgctcaa agaaatgtat       600
     gatgacagta tgctccaaga gaatgatttg gaagtatatc atcaatctga tgagaggact       660
     gaatttaaag atgcaggagc gaaccctcca gcccctaagc ctaagaacgt tcctccacca       720
     cccacaataa ctgaaatcac tgatccagag gacccgaagc aggcagcttt gaaagctgaa       780
     cgagcaaagc aacccgcggt tattccagag tcatatggac gagacacgag caaagaaagg       840
     gagtcaatag tgggggcatc atcaaagggt gtgagggata aagatgtgaa tgttggcacc       900
     gttggtacat ttgttgtgcc acgtgtcaag atgaatgcaa ataagaaaag gcaaccaatg       960
     gtcaatggaa gggccattat aaatttccag cacttgtcaa catatgaacc agagcagttt      1020
     gaggttgcaa acacccggtc aactcaagaa cagttccaag catggtatga aggagttaaa      1080
     ggggattatg gtgtcgacga cacagggatg gggatcttat tgaatggact aatggtttgg      1140
     tgcattgaaa atgggacatc cccaaacata aatggtgtat ggacaatgat ggatggtgat      1200
     gaacaagtaa catatccaat taaaccatta ctggaccatg cagtgcctac ttttaggcag      1260
     attatgacgc acttcagtga cgttgctgaa gcttacatag agatgcgaaa ccgtacaaag      1320
     gcatacatgc caaggtatgg tctacaacgt aatttgactg atatgagtct tgcgcgatat      1380
     gcatttgatt tttacgagct gcattcaact acacctgcac gtgctaaaga agcacattta      1440
     cagatgaagg cagctgcact taagaatgcg cgaaatcggt tgtttggttt agacggaaac      1500
     gtctctacgc aagaagaaga tacggagagg cacacgacaa ctgatgttac tagaaatata      1560
     cataacctct taggaatgag gggtgtgcaa taggacatcc tctgcactgt agcttatact      1620
     tatgttatct ttagtatgcc tttaatttaa attcgtgtct ttcagtcccg aaggagatgg      1680
     ttgaatgcat aacatggtgg gattatatct cggttattgc atttgagaag tcacctttct      1740
     attacgtatc ataagggact cttaaaagtg aggagtacct cgtaagaaaa gcctttttgg      1800
     ttcgtgatcg agcc                                                        1814
//