ID   AJ539129; SV 1; linear; genomic RNA; STD; VRL; 1808 BP.
XX
AC   AJ539129;
XX
DT   01-APR-2003 (Rel. 75, Created)
DT   31-OCT-2003 (Rel. 77, Last updated, Version 2)
XX
DE   Sweet potato feathery mottle virus gene for polyprotein, genomic RNA,
DE   isolate Sor
XX
KW   coat protein; CP; NIb protein; nuclear inclusion body protein; polyprotein.
XX
OS   Sweet potato feathery mottle virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1808
RA   Mukasa S.B.B.;
RT   ;
RL   Submitted (28-JAN-2003) to the INSDC.
RL   Mukasa S.B.B., Plant Biology, Uppsala Genetics Centre, Box 7080, Uppsala,
RL   SE-750 07, SWEDEN.
XX
RN   [2]
RX   DOI; 10.1023/A:1025172402230.
RX   PUBMED; 12913357.
RA   Mukasa S.B., Tairo F., Kreuze J.F., Kullaya A., Rubaihayo P.R.,
RA   Valkonen J.P.T.;
RT   "Coat protein sequence analysis reveals occurrence of new strains of Sweet
RT   potato feathery mottle virus in Uganda and Tanzania";
RL   Virus Genes 27(1):49-56(2003).
XX
DR   MD5; 2a0cb8714e5d02d63aa67aae5f78d808.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1808
FT                   /organism="Sweet potato feathery mottle virus"
FT                   /host="Ipomoea batatas"
FT                   /strain="C"
FT                   /isolate="Sor"
FT                   /mol_type="genomic RNA"
FT                   /country="Uganda:Soroti"
FT                   /db_xref="taxon:12844"
FT   CDS             <1..1587
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q80MW4"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:Q80MW4"
FT                   /protein_id="CAD62244.1"
FT                   /translation="GNNSGQPSTVVDNTLMVVLAVYYTLLKLGVSEFEISKRCVFFANG
FT                   DDLLIAMRPDTAHLLDSFGECFAELGLNYDFSSRTTKKEELWFMSHCGIKRDGMYIPKL
FT                   EPERIVSILEWDRSHEPVHRLEAICAAMVEAWGYDELLHQIRKFYAWVLGQAPYSELAR
FT                   TGKAPYIAETALKSLYTGVQPSADDLSEYTRVLNEMYDDSLLQDNDLLVYHQSGNPPEF
FT                   KDAGANPPAPKPKGPYTAPEITEITEPEDPKQATLREAKQKQPAVIPESYGRDTGEKPM
FT                   RSVSPQRVKDKDVNVGTTGTFIVPRVKLHTSKMRQPRVNGISVVNLQHLATYEPEQHNI
FT                   GNTRSTQEQFRAWYEGVKGDYGVDDAGMVILLNGLMVWCIENGTSPNINGVWTMMDGDE
FT                   QVTYPIKPLLDHAVPTFRQIMTHFSDVAEAYIEMRNRTKAYMPRYGLQRNLTDMSLARY
FT                   AFDFYELHSTTPARAKEAHMQMKAAALKNAHNRLFGLDGNVSTQEEDTERHTATDVTRN
FT                   IHNLLGMRGVQ"
FT   mat_peptide     <1..645
FT                   /product="nuclear inclusion body protein"
FT                   /note="NIb"
FT   mat_peptide     646..1584
FT                   /product="coat protein"
FT                   /note="CP"
XX
SQ   Sequence 1808 BP; 547 A; 358 C; 433 G; 470 T; 0 other;
     gggaacaata gtgggcagcc atcaaccgtc gtggacaata cactgatggt tgtgttagcc        60
     gtctactata ctttgttgaa attgggtgtt tcagagttcg agatcagtaa acggtgtgta       120
     ttctttgcaa atggggatga tttactgata gctatgagac cagatacagc tcatcttttg       180
     gatagcttcg gtgagtgctt tgctgagctt gggcttaact atgacttctc atcaaggaca       240
     actaagaaag aggaactatg gttcatgtct cactgtggaa tcaaacgaga tggaatgtac       300
     attcccaaac tcgagcctga acgaatagta tctattcttg aatgggatag atcacatgag       360
     cctgtacaca gacttgaagc aatttgtgct gcaatggtgg aagcgtgggg ttacgatgaa       420
     cttctccacc aaattaggaa attttatgca tgggttttag gacaagcacc atacagtgaa       480
     ctagcacgaa ctggaaaggc cccatacatt gctgaaactg cacttaaatc actgtacact       540
     ggagtacaac ctagcgctga cgatcttagc gagtacacgc gtgtacttaa tgagatgtat       600
     gatgatagcc ttctccaaga caatgactta ttggtgtatc atcaatctgg caaccctcct       660
     gaatttaaag atgcaggcgc aaacccacca gccccaaaac caaaagggcc atatacagca       720
     ccagaaatca cagagattac tgagccggag gatcccaaac aagctacgct tcgtgaagct       780
     aaacagaaac aacctgctgt catacccgaa tcatacggta gagacacagg tgagaaacct       840
     atgcgctctg tttcaccaca aagggtgaaa gacaaggatg tcaacgttgg cacgacaggc       900
     acatttatag taccacgagt taagctccat actagcaaaa tgcggcaacc tagagtcaat       960
     ggaatctctg tagtaaactt acaacacctc gcaacttatg aacctgagca acataacatt      1020
     gggaatacac gctcaactca ggaacagttt cgagcatggt atgaaggtgt taagggtgat      1080
     tatggtgtcg atgatgctgg aatggtaatc ttgttgaatg gattgatggt atggtgcata      1140
     gagaatggaa catctccaaa tataaatggc gtttggacga tgatggatgg ggatgagcaa      1200
     gtgacgtacc ccataaagcc attactggat catgcagtgc ccacttttag gcaaatcatg      1260
     acacacttca gtgacgttgc tgaagcgtat atagaaatga gaaatcgtac caaggcatat      1320
     atgcctaggt atggattaca acgtaacttg actgatatga gtcttgcgcg atatgcattt      1380
     gatttctatg agctgcactc gacaacacct gcacgtgcta aagaagcaca catgcagatg      1440
     aaagcagctg cacttaagaa tgcgcataat cggttgtttg gtttggatgg aaacgtctcc      1500
     acgcaagaag aggatacgga gaggcacact gcgactgatg ttactagaaa tatacataac      1560
     ctcttaggaa tgaggggtgt gcagtaggtg aaactttgca ctgtatttat ttacttatgt      1620
     ggttctagta tgcctttatt taaattcgtg tccttcagtc ccgacagaga tggttaggtg      1680
     tatcggcaga gtgggctttt agcctggtct atacacttga gaagtttctg gtctattacg      1740
     tatcataagg gactcttaaa agtgaggagt acctcgtaag aaaagccttt ttggttcgtg      1800
     atcgagcc                                                               1808
//