ID AJ536414; SV 1; linear; genomic RNA; STD; VRL; 3261 BP. XX AC AJ536414; XX DT 13-MAY-2004 (Rel. 79, Created) DT 14-DEC-2008 (Rel. 98, Last updated, Version 3) XX DE Tobacco rattle virus CP gene and ORF1, ORF2 and ORF3 DNA XX KW coat protein; CP gene; ORF1; ORF2; ORF3. XX OS Tobacco rattle virus OC Viruses; Riboviria; Virgaviridae; Tobravirus. XX RN [1] RP 1-3261 RA Choi S.; RT ; RL Submitted (13-JAN-2003) to the INSDC. RL Choi S., Division of Environment and Life Science, 139-774, 126 RL Gongreundong, Nowongu, Seoul, SOUTH KOREA. XX RN [2] RA Choi S., Ryu K., Choi J.; RT "Genomic analysis of TRV-K RNA2"; RL Unpublished. XX DR MD5; 6ff1f3a75f7977423bc78635a89594be. DR RFAM; RF01101; TLS-PK6. XX FH Key Location/Qualifiers FH FT source 1..3261 FT /organism="Tobacco rattle virus" FT /segment="RNA2" FT /host="Gladiolus sp." FT /strain="K" FT /mol_type="genomic RNA" FT /country="South Korea" FT /db_xref="taxon:12295" FT CDS 523..1125 FT /gene="CP" FT /product="coat protein" FT /function="capsid" FT /db_xref="GOA:O56247" FT /db_xref="InterPro:IPR001337" FT /db_xref="InterPro:IPR036417" FT /db_xref="UniProtKB/TrEMBL:O56247" FT /protein_id="CAD60428.1" FT /translation="MTDGMYDEEFDSKALNETFSPWVEEKNWKDVLMRLSAMKFALQAD FT RDKIPGVLSDLKKDCPFSAFKRFPDKEMWSKLTKEAVIALAQIQAASSFKRRADEKNAV FT SGLITATPAQASTSNANPSGSATTVVRPPRLDDSSFQEDSFSFGKFDDASTAYHKALSY FT LEGLNLKPLYRRQFEKSYNTRWVPAATPVAPGPRPNP" FT CDS 1238..1843 FT /product="hypothetical protein" FT /note="ORF1" FT /db_xref="UniProtKB/TrEMBL:Q6KF13" FT /protein_id="CAD60429.1" FT /translation="MEEYRLWSKNPDYFFSDNAKLFLLHGHHDSPYYKSGEYTVSRSVN FT WGDPEFLMVIGMSRLLTFLSERHLCINVDGNCYSRIQEGLYYYGKFDIYSLMVGNSTQW FT DDFVIYRELMRVHIDFRNVLELLQLAGADRGRLFPRLRELLDLEKVVYSTSKLPDKDIT FT LMIQNLKDQLSATTLENDNLKKENVMLKSRVEAAQAQA" FT CDS 2021..2212 FT /product="hypothetical protein" FT /note="ORF1" FT /db_xref="UniProtKB/TrEMBL:Q6KF12" FT /protein_id="CAD60430.1" FT /translation="MSKVSDDNDFEHLSPIEKRIWGPKEVYHYVKMYYRFPQRNFIDER FT IVKDKEREDRRASVCRPA" FT CDS 2214..2690 FT /product="hypothetical protein" FT /note="ORF1" FT /db_xref="UniProtKB/TrEMBL:Q6KF11" FT /protein_id="CAD60431.1" FT /translation="MTSASIWTLKQGDYPKGSMLIRRRVKNSVLTGKGGYVDLDGNVAV FT GTGWRWEIDFSDLRKLRFSFDSSDTMFGHLRLTFELFTTVNFKSIASYKHEGYKSSPSN FT KLLLLNKVVTNNSYMVTVDEELIRATSFEVVFEWPAPDWTGHLDLVLPSLPSRP" XX SQ Sequence 3261 BP; 938 A; 575 C; 788 G; 960 T; 0 other; ataaaacatt gcacctttgg tgttgccctg gccggggtgt gtctttgaac acagtagtat 60 gtgctaattg acaagttgga gaacgcggta gaacgtactt atccgacacg gccttttatc 120 cctttgttga gaggtttttc tcagccgcaa tgaaattctg gatttagttg gccgctagaa 180 ggctgaagga atgtagttgt gtttttagtt tagttaataa gtgtcttcca atacacatta 240 aaccttggac gtgttagcta cgaaagtgtg taaatttaaa aacaattagt cctccgtgat 300 taaggatgat taaggctaaa aacgattgtt aatgattttg gcaatcgcat ccattcgcta 360 tcacaagcga tggtggcatt gacccggaaa ggtctaatct tgcggtcatt cgactggaag 420 aagcataatt atactgattg tgcaactttg tgttactatt ctgacagtga ttcttgctga 480 actactggtt actgtatcac ttgcaatcac tcgcgttccg cgatgacaga cggtatgtac 540 gatgaggagt ttgatagcaa agctctcaac gaaacgtttt cgccatgggt tgaggagaag 600 aactggaaag acgttctaat gaggttgagc gctatgaaat ttgcgttaca agctgacagg 660 gacaaaattc ctggggtttt atcggatctg aaaaaggact gtcctttcag tgcttttaag 720 aggtttcctg acaaagagat gtggtcgaaa ttgacgaagg aggctgtcat tgctttagct 780 caaattcaag ctgcttcttc ttttaagagg agggcagatg aaaagaatgc tgtttctggg 840 ttgattactg caacacctgc tcaagcttct actagtaacg cgaacccaag tggttcagca 900 accacagtgg tgagaccacc aaggttggac gactcgtctt tccaagagga tagcttttct 960 tttggtaagt tcgatgacgc ttctactgcg tatcataaag ctctctccta tttggaaggt 1020 ttaaatttga aaccgttata taggagacag tttgagaaat cgtacaacac taggtgggtt 1080 cctgctgcca ctccggtggc gcctgggccg cgtccgaatc cctaattcta agtttgtcag 1140 atactctttc agagggtcac gtgaaaatcg tgaggtggtg tttaccatat aacataatgt 1200 catatgtggg catttaaaat aatcacactg ctgcgagatg gaggagtata ggctttggtc 1260 aaagaatccg gattatttct tttccgacaa tgcaaaactg ttcttactgc atgggcatca 1320 cgatagtccg tattataaga gcggggaata cactgtttct cgttcggtta attggggaga 1380 tcctgaattt cttatggtaa ttggaatgtc tagactttta actttcctat cagaaagaca 1440 tttatgtatc aatgtggacg ggaattgtta ttcacggatc caagagggtc tgtattacta 1500 tggaaagttt gacatttact cgttgatggt tggaaatagt actcagtggg atgatttcgt 1560 aatttataga gagctaatga gagttcacat cgactttcgt aacgtgttag aacttcttca 1620 gctggctggc gctgatagag gtcgactgtt tcctaggttg cgagaattgt tagacctcga 1680 aaaagtcgtt tattcgacgt caaaactacc ggacaaagat attacgctga tgatacaaaa 1740 tctcaaagat cagttgtctg cgacgacttt agagaacgac aatttgaaga aagagaacgt 1800 catgctgaag agtcgagtcg aagcggcaca agcgcaagct tagactagac atctcgaaaa 1860 cgacgatctg aagaaacaaa tcgggtcgtt gaagaagaaa accgcagatg tgggaagtat 1920 ctctgaagct attgttcaag taccggtggt gttgcctgcg aagccgactc ctaaagttaa 1980 gaagtatccc gatgattaca acaacgagga actgagtgca atgtcaaagg taagcgatga 2040 taatgatttc gagcatttat caccaattga aaaaagaatt tggggcccta aggaagtata 2100 tcattatgtt aagatgtatt acagattccc acagaggaat ttcatagacg aacgcattgt 2160 caaagacaag gaaagagaag acagacgcgc aagcgtctgt agaccggcat aaaatgacga 2220 gcgcatccat ctggacccta aaacagggtg attacccgaa gggttctatg ttaattcgta 2280 ggagggttaa aaattctgtc ttgactggaa aaggtggtta cgtagatctg gacggtaatg 2340 tagcggtcgg aactggatgg cgatgggaaa tcgactttag tgacctgcgt aagctgcgat 2400 tttcgtttga ttcttcagat actatgtttg gtcatttacg gttaactttt gaactattca 2460 ctacggtgaa ttttaagtca atagcctctt ataagcacga aggttacaag tcgtcaccgt 2520 cgaataagct gttgcttctc aacaaggtag tgaccaacaa tagttatatg gtgacggtag 2580 acgaagaact cataagagcg acttcttttg aagttgtctt cgaatggcct gcaccagatt 2640 ggaccggtca cttggactta gtgcttcctt cactaccttc aagaccttaa gggttgacgt 2700 aggtgcgcgg agagtaattg tggatggttt gtctgtatta ttatcaatga ttttactttt 2760 gatatgtata attgttgtgg ccgtagccac cttggaaaat gtcgtagacg cgttgaagca 2820 agaaatcgag agttctggaa acagattcga cgaaatcaag ctgaaaacac gtcttcgaca 2880 cctaaaaagt ctcataattc gaagacctct aagaagaaat tcaaaggggt cagagaattc 2940 ggggcaccaa aaagattttt aagagatgat gttccgttag gaattgatca attatttgct 3000 tttaaatttt gttttaaatt gttatctgtt tctgtgtata gactgtttga gattggcgct 3060 tggccgactc attgtcttac cataggggaa cggactttgt ttgtgttgtt attttatttg 3120 tattttatta aaattctcaa tgatctgaaa aggcctcgag gctaagagat tattgggggg 3180 tgagtaagta cttttaaagt gatgatggtt acaaaggcaa aaggggtaaa acccctcgcc 3240 tacgtaagcg ttattacgcc c 3261 //