ID   AJ535085; SV 1; linear; genomic RNA; STD; VRL; 1465 BP.
XX
AC   AJ535085;
XX
DT   15-OCT-2003 (Rel. 77, Created)
DT   19-MAY-2005 (Rel. 83, Last updated, Version 3)
XX
DE   Daphne virus S partial CP gene for coat protein and ORF6, genomic RNA,
DE   strain Kr2
XX
KW   coat protein; CP gene; ORF6.
XX
OS   Daphne virus S
OC   Viruses; Riboviria; Tymovirales; Betaflexiviridae; Quinvirinae; Carlavirus.
XX
RN   [1]
RP   1-1465
RA   Ryu K.;
RT   ;
RL   Submitted (14-DEC-2002) to the INSDC.
RL   Ryu K., Department of Horticultural Science, Plant Virus GenBank, 139-774,
RL   Seoul Women's University, 139-774, Seoul, SOUTH KOREA.
XX
RN   [2]
RX   DOI; 10.1007/s00705-003-0161-2.
RX   PUBMED; 14551815.
RA   Lee B.Y., Choi S.H., Ryu K.H.;
RT   "Characterization of the 3'-terminal nucleotide sequence of two Korean
RT   isolates of Daphne virus S support its placement as a distinct species of
RT   the genus Carlavirus";
RL   Arch. Virol. 148(10):1915-1924(2003).
XX
DR   MD5; 6fa8a439c8729458026085f748998451.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1465
FT                   /organism="Daphne virus S"
FT                   /host="Daphne odora"
FT                   /strain="Kr2"
FT                   /mol_type="genomic RNA"
FT                   /country="South Korea"
FT                   /db_xref="taxon:216614"
FT   CDS             110..1066
FT                   /transl_table=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /function="encapsidation"
FT                   /db_xref="GOA:Q70VI6"
FT                   /db_xref="InterPro:IPR000052"
FT                   /db_xref="InterPro:IPR013569"
FT                   /db_xref="UniProtKB/TrEMBL:Q70VI6"
FT                   /experiment="experimental evidence, no additional details
FT                   recorded"
FT                   /protein_id="CAD59392.1"
FT                   /translation="MPPKPDPQSSDEQNAEAIARKMEEERLALERAEAARVAQLPRPTS
FT                   GNQNREHRRAVGVPREGEEERIEQRLDALRQMLRAERGNISVTNASFERGRPALTPTPD
FT                   MRGDASNPYSRPSTDLLWSIKPKPRSDNMATSEDIMRISTQLEGLGVPTEHVSKVILQA
FT                   VFYCADKSSSSYQDPQGTFEFPGGAIMVDDVVGTINSICTLRKVCRLYAAVVWNYMHIH
FT                   DKPPADWRAMGFNYNTRYAAFDFFDYVENEAAIKPAGGIVPRPTDAEYIAFHTYKQLAL
FT                   DRANNNATYANLDVAVTGGRTGPMIERNLNNANNRKQ"
FT   CDS             1063..1392
FT                   /transl_table=1
FT                   /product="hypothetical 12K protein"
FT                   /function="unknown"
FT                   /note="ORF6"
FT                   /db_xref="GOA:Q70VI5"
FT                   /db_xref="InterPro:IPR002568"
FT                   /db_xref="UniProtKB/TrEMBL:Q70VI5"
FT                   /experiment="experimental evidence, no additional details
FT                   recorded"
FT                   /protein_id="CAD59393.1"
FT                   /translation="MNAEQSAACAVLISVFEEHGVCVPIAICENISRRAFPFCPGGGRS
FT                   SYARKRRATSIGRCHRCYRAWPPFYYTTKCDNKTCFPGISFNKKIQDYILWGVTEVIPH
FT                   PGFNF"
FT   3'UTR           1393..1465
FT                   /gene="3'UTR"
XX
SQ   Sequence 1465 BP; 393 A; 331 C; 375 G; 365 T; 1 other;
     aaatgacccc agctttcatt gaatatgcca aaggttdgca cgttgaaaga atttgagtcg        60
     ctttaggttt acagcagtta ggcgtcttaa taattctcga tcaaataaaa tgcctccaaa       120
     accagaccca cagagttctg acgaacagaa tgctgaagcc atagctagga agatggagga       180
     ggagcgactg gctcttgagc gagcagaagc cgccagagtt gcccaattgc ctaggcctac       240
     tagtggcaat caaaataggg aacataggcg tgcagtcggt gtgccccgtg agggtgaaga       300
     ggagcgcatt gagcagagac ttgatgcact aaggcaaatg ctgagggctg agagggggaa       360
     tatctctgta actaacgcca gctttgagcg gggccggcct gcgctgactc caactcctga       420
     catgcgtggt gatgcgagca atccttacag caggccaagc actgacttgc tctggtcaat       480
     caagcctaag ccgcggtctg ataacatggc cacgtcagag gacataatgc gcatttccac       540
     ccaacttgag gggctgggtg tgccaacaga gcacgtgagc aaggttatac tgcaggccgt       600
     gttttactgc gctgacaaaa gcagttccag ctatcaagat ccacagggca ctttcgaatt       660
     ccccggtggg gcaatcatgg tggacgatgt cgtggggacc atcaacagca tttgcactct       720
     gcgcaaagtc tgtaggctgt acgccgcagt ggtctggaat tacatgcata tacatgacaa       780
     accgccggct gattggcgtg caatgggttt taactacaac accagatatg ccgcttttga       840
     cttcttcgac tatgttgaaa atgaagctgc cattaagcct gccggcggaa ttgtgcctag       900
     gcccactgat gcagaataca ttgcgttcca tacttacaag cagcttgcgc tggatagagc       960
     aaataacaat gcaacctatg ccaatttaga tgttgctgtg actggcggac gcactgggcc      1020
     tatgatcgag cgcaatttga acaatgccaa taatcgtaag caatgaatgc agagcaatct      1080
     gccgcctgtg ctgttttaat aagtgtgttt gaagaacacg gtgtgtgtgt gcctatagcc      1140
     atttgtgaga atattagccg tagggctttt cctttctgcc cagggggcgg tcgttcttcc      1200
     tatgccagga agcgacgtgc gacctctatc gggcgctgcc ataggtgtta cagggcttgg      1260
     cctcccttct attatactac taagtgtgat aataaaacct gttttccagg tataagtttt      1320
     aacaagaaga ttcaggatta catcctgtgg ggagtaactg aggtgatacc ccacccagga      1380
     ttcaatttct gaggttgcat ataaagccta attaatatat aagtatgcac ctataaaata      1440
     ataagttttt aaatattttt ccctt                                            1465
//