ID   AJ535084; SV 1; linear; genomic RNA; STD; VRL; 1465 BP.
XX
AC   AJ535084;
XX
DT   15-OCT-2003 (Rel. 77, Created)
DT   19-MAY-2005 (Rel. 83, Last updated, Version 3)
XX
DE   Daphne virus S partial CP gene for coat protein and ORF6, genomic RNA,
DE   strain Kr
XX
KW   coat protein; CP gene; ORF6.
XX
OS   Daphne virus S
OC   Viruses; Riboviria; Tymovirales; Betaflexiviridae; Quinvirinae; Carlavirus.
XX
RN   [1]
RP   1-1465
RA   Ryu K.;
RT   ;
RL   Submitted (14-DEC-2002) to the INSDC.
RL   Ryu K., Department of Horticultural Science, Plant Virus GenBank, 139-774,
RL   Seoul Women's University, 139-774, Seoul, SOUTH KOREA.
XX
RN   [2]
RX   DOI; 10.1007/s00705-003-0161-2.
RX   PUBMED; 14551815.
RA   Lee B.Y., Choi S.H., Ryu K.H.;
RT   "Characterization of the 3'-terminal nucleotide sequence of two Korean
RT   isolates of Daphne virus S support its placement as a distinct species of
RT   the genus Carlavirus";
RL   Arch. Virol. 148(10):1915-1924(2003).
XX
DR   MD5; 8d33529df42251aca9b87ee7a94f4e33.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1465
FT                   /organism="Daphne virus S"
FT                   /host="Daphne odora"
FT                   /strain="Kr"
FT                   /mol_type="genomic RNA"
FT                   /country="South Korea"
FT                   /db_xref="taxon:216614"
FT   CDS             110..1066
FT                   /transl_table=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /function="encapsidation"
FT                   /db_xref="GOA:Q70VI8"
FT                   /db_xref="InterPro:IPR000052"
FT                   /db_xref="InterPro:IPR013569"
FT                   /db_xref="UniProtKB/TrEMBL:Q70VI8"
FT                   /experiment="experimental evidence, no additional details
FT                   recorded"
FT                   /protein_id="CAD59390.1"
FT                   /translation="MPPKPDPQSSDEQNAEAIARKMEEERLALERAEAARAAQLPRPGS
FT                   GNQNRDHRRAVGVPREGEDERIEQRLDALRQMLRAERGNISVTNASFERGRPALTPTPD
FT                   MRGDASNPYSRPSTDLLWSIKPKPRSDNMATSEDIMRISTQLEGLGVPTEHVSKVILQA
FT                   VFYCADKSSSSYQDPQGTFDFPGGAIMVDDVVGTINSICTLRKVCRLYAAVVWYYMHIH
FT                   DKPPADWRAMGFNYNTRYAAFDFFDYVENEAAIKPAGGIVPRPTDAEYIAFHTYKQLAL
FT                   DRANNNATYANLDVAVTGGRTGPMIERNLNNANNRKQ"
FT   CDS             1063..1392
FT                   /transl_table=1
FT                   /product="hypothetical 12K protein"
FT                   /note="ORF6"
FT                   /db_xref="GOA:Q70VI7"
FT                   /db_xref="InterPro:IPR002568"
FT                   /db_xref="UniProtKB/TrEMBL:Q70VI7"
FT                   /experiment="experimental evidence, no additional details
FT                   recorded"
FT                   /protein_id="CAD59391.1"
FT                   /translation="MNAEQSAACAVLISVFEAHGVCVPIAICENICRRAFPFCPGSGRS
FT                   SYARKRRAASIGRCHRCYRVWPPFYYTTKCDNKTCFPCISFNKKVQDYILWGVTEVIPH
FT                   PGFNF"
FT   3'UTR           1393..1465
FT                   /gene="3'UTR"
XX
SQ   Sequence 1465 BP; 385 A; 318 C; 375 G; 387 T; 0 other;
     agatgacccc agctttcatt gaatatgcta aaggtctaca cattgaaagg atttgagtcg        60
     ctttaggttt acagcagtta ggcgtcttaa taaatctcga tcaaataaaa tgcctccaaa       120
     accagacccg cagagttccg atgaacagaa tgctgaagcc attgctagga aaatggagga       180
     agagcgactg gctctagagc gagcagaagc tgccagagct gctcagttgc ctaggcctgg       240
     tagcggcaat caaaatcggg accacaggcg tgctgttggc gttcctcgtg agggtgaaga       300
     cgaacgcatc gagcagaggc ttgatgcact aaggcaaatg ttgagggctg agcgggggaa       360
     tatatctgtg actaatgcta gctttgaacg gggccggcct gcgctgactc caactccaga       420
     catgcgcggt gatgctagta atccttacag caggccaagc actgatttgc tctggtcaat       480
     taagcctaaa ccgcggtctg ataacatggc cacgtcagag gacataatgc gcatatccac       540
     ccaacttgaa gggttgggtg tgccgactga gcacgtgagc aaggttatac tgcaggccgt       600
     gttttactgc gctgacaaaa gcagctctag ctaccaggat ccacagggca ctttcgattt       660
     tcccggtggt gcaattatgg tggatgatgt tgtggggacc atcaacagca tttgcactct       720
     gcgtaaagtc tgtaggttgt acgctgcagt ggtttggtat tacatgcata tacatgataa       780
     accaccggct gattggcgcg ccatgggctt taattacaac accagatatg ccgctttcga       840
     tttcttcgac tatgttgaga atgaagcggc cattaagcct gcaggcggaa ttgtacccag       900
     acccactgat gctgaataca ttgcgttcca cacttacaag cagcttgcgc tggatagggc       960
     gaacaataat gctacctatg ccaatctaga cgttgccgtc acaggtggac gcactgggcc      1020
     aatgatcgag cgcaatctga acaatgccaa taatcgtaag caatgaatgc ggagcagtct      1080
     gctgcctgtg ctgttttaat aagtgtgttt gaagctcatg gagtgtgtgt gcctatagct      1140
     atttgtgaga atatttgccg tagggctttt cctttctgcc cggggagtgg tcgttcttcc      1200
     tatgccagga agagacgagc ggcctccatt gggcgctgtc ataggtgtta cagggtttgg      1260
     cctccctttt attatactac taagtgtgat aataaaacct gttttccatg tataagtttt      1320
     aacaagaaag ttcaggatta catcctttgg ggagtaactg aggtgatacc ccacccagga      1380
     tttaatttct gaggttgcat ataaagccta attaatatat aagtgtgcac ctataaaata      1440
     ataagttttt aaatattttt tcctt                                            1465
//