ID   AJ517479; SV 1; linear; mRNA; STD; VRL; 1154 BP.
XX
AC   AJ517479;
XX
DT   11-SEP-2003 (Rel. 77, Created)
DT   19-SEP-2003 (Rel. 77, Last updated, Version 2)
XX
DE   Barley yellow mosaic virus partial gene for polyprotein, genomic RNA2,
DE   isolate GB, strain 2
XX
KW   P2 protein; polyprotein.
XX
OS   Barley yellow mosaic virus
OC   Viruses; Riboviria; Potyviridae; Bymovirus.
XX
RN   [1]
RP   1-1154
RA   Kanyuka K.;
RT   ;
RL   Submitted (19-NOV-2002) to the INSDC.
RL   Kanyuka K., Plant-Pathogen Interactions Division, Rothamsted Research,
RL   Harpenden, Hertfordshire, AL5 2JQ, UNITED KINGDOM.
XX
RN   [2]
RX   DOI; 10.1099/vir.0.19347-0.
RX   PUBMED; 13679620.
RA   Kuehne T., Shi N., Proeseler G., Adams M., Kanyuka K.;
RT   "The ability of a bymovirus to overcome the rym4-mediated resistance in
RT   barley correlates with a codon change in the VPg coding region on RNA1.";
RL   J. Gen. Virol. 84(Pt 10):2853-2859(2003).
XX
DR   MD5; 5145e6733017b1640ba6467b75ff0a5e.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1154
FT                   /organism="Barley yellow mosaic virus"
FT                   /host="Hordeum vulgare"
FT                   /strain="2"
FT                   /isolate="GB"
FT                   /mol_type="mRNA"
FT                   /country="Germany:Gatersleben"
FT                   /db_xref="taxon:12465"
FT   CDS             <3..1079
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /note="RNA2"
FT                   /db_xref="GOA:Q70WG3"
FT                   /db_xref="InterPro:IPR036417"
FT                   /db_xref="UniProtKB/TrEMBL:Q70WG3"
FT                   /protein_id="CAD57013.1"
FT                   /translation="GDGEDYTNWNSGHDHWIVNRFITVKDLHSGLKSALEVDLDTEGGR
FT                   NAVLDLLLDPGVTNLVRREKRFPAYFQGAESVYLLLSCERVGNELVAVQDALQEPLANY
FT                   TGKDLRALIINLGGLPSRHPEICYTRNIFENDNHLVWNFEFYRIASITKNAQIDRDALS
FT                   SFMANLFSDFVSESSNGEYRVKEPRPVTQYRVEHDEPVASGAPSAWWQVLVGITTAILG
FT                   AIIFFLWRCFLRAKRVKFQAKDSFPWFTTSANEELVQRSMTKLDKEIELFQAQIDSQRR
FT                   AVTITEASNLRENILQPINTVANIAMAGAFLRGGARHRMPGMPDVAAPMPNPFRAFSGR
FT                   GHSLTTTRGAGLFQRPRV"
FT   mat_peptide     <3..1076
FT                   /product="P2 protein"
FT   variation       759..760
FT                   /note="deletion of approximately 836 bp compared to D01099"
FT   3'UTR           1077..>1154
XX
SQ   Sequence 1154 BP; 305 A; 256 C; 269 G; 324 T; 0 other;
     acggtgatgg tgaggactac acaaactgga actctggtca tgatcactgg attgtgaatc        60
     gatttataac agtcaaggat ttgcatagtg gtttaaaatc agctttggaa gttgatttgg       120
     acacagaggg tgggcgaaac gctgttctcg acttgcttct agatcctggg gtcactaatc       180
     ttgttcgaag agagaaacgt ttcccagcat atttccaggg agctgaaagt gtatatctgc       240
     ttctatcatg tgagagagtc ggaaatgagt tagtggctgt gcaagatgcc ctgcaggaac       300
     cattagctaa ttacactgga aaggatttga gagctctcat catcaatctt ggcggtttac       360
     caagcagaca ccctgaaatt tgttacacac gcaacatctt tgagaatgat aatcacctgg       420
     tttggaactt tgagttctac cgaatagcct caatcacgaa gaatgcacaa atcgacagag       480
     atgccctgag ctcattcatg gcgaacttat ttagtgactt tgtttcagag tcatcaaatg       540
     gtgagtacag agttaaggaa ccaagacctg ttacccagta cagggttgag catgatgaac       600
     cagttgctag tggtgcccca tctgcctggt ggcaagtgct tgttggcatc accaccgcta       660
     ttctaggcgc tattatattc tttctctgga ggtgtttctt gcgggccaag cgtgtgaaat       720
     tccaggcaaa ggattccttt ccatggttta ccacttctgc taatgaggaa ttagtccaac       780
     gttctatgac aaaattggat aaggagatag agttattcca agcacaaatt gatagccagc       840
     gtcgcgctgt caccatcact gaagcatcca atcttagaga gaatatattg cagccaatca       900
     acactgttgc aaatattgct atggctggag cttttctgcg tgggggcgcg cgccatcgca       960
     tgccagggat gccagatgtg gctgcaccca tgccaaaccc ttttcgagct ttctcaggga      1020
     ggggacattc actcactaca actcgaggtg ctggtctttt ccaacgccct cgagtttaga      1080
     atttccatta tagcagtatc tactttccgc cgccctagca taatttagat caacattatc      1140
     catttcttcc tcct                                                        1154
//