ID   AJ517477; SV 1; linear; mRNA; STD; VRL; 936 BP.
XX
AC   AJ517477;
XX
DT   11-SEP-2003 (Rel. 77, Created)
DT   19-SEP-2003 (Rel. 77, Last updated, Version 2)
XX
DE   Barley yellow mosaic virus partial gene for polyprotein, genomic RNA1,
DE   isolate VIR, strain 2
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KW   14 kDa protein; NIa protein; polyprotein; VPg protein.
XX
OS   Barley yellow mosaic virus
OC   Viruses; Riboviria; Potyviridae; Bymovirus.
XX
RN   [1]
RP   1-936
RA   Kanyuka K.;
RT   ;
RL   Submitted (19-NOV-2002) to the INSDC.
RL   Kanyuka K., Plant-Pathogen Interactions Division, Rothamsted Research,
RL   Harpenden, Hertfordshire, AL5 2JQ, UNITED KINGDOM.
XX
RN   [2]
RX   DOI; 10.1099/vir.0.19347-0.
RX   PUBMED; 13679620.
RA   Kuehne T., Shi N., Proeseler G., Adams M., Kanyuka K.;
RT   "The ability of a bymovirus to overcome the rym4-mediated resistance in
RT   barley correlates with a codon change in the VPg coding region on RNA1.";
RL   J. Gen. Virol. 84(Pt 10):2853-2859(2003).
XX
DR   MD5; 1ab215728532adf76731a7430b7e9843.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..936
FT                   /organism="Barley yellow mosaic virus"
FT                   /host="Hordeum vulgare"
FT                   /strain="2"
FT                   /isolate="VIR"
FT                   /mol_type="mRNA"
FT                   /country="Germany"
FT                   /db_xref="taxon:12465"
FT   CDS             <1..>936
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /note="RNA1"
FT                   /db_xref="GOA:Q70WG5"
FT                   /db_xref="InterPro:IPR001730"
FT                   /db_xref="UniProtKB/TrEMBL:Q70WG5"
FT                   /protein_id="CAD57011.1"
FT                   /translation="AVESKLCGFTFVFPDDDKIGLEGKGNKYRPREDARLMYSTREDAT
FT                   LDAWNEKAKERRKKVTDKAEPELRRAYEKRPYFNFYDLQTDSNILEAIFYTTEGDEFFR
FT                   TADPNKDMNLVADKLRSFLDTKLVVGHHQRKLLEETAAVVIRDTKGTVHNMEISQHDPD
FT                   FLKQNGSGKVGYPEHRGQFRQEGVAITADYDLEAEFGADTDEITLEASTGILLSQVGVD
FT                   VATRVGRICIGTFNMNCYFYSDWILVPGHLQDRSGNVTIQFPDQTVQTTTDALNANGVK
FT                   RFYGLDVIAIRRPAALRPRTKLVKAFAIEEP"
FT   mat_peptide     <1..66
FT                   /product="14 kDa protein"
FT   mat_peptide     67..627
FT                   /product="VPg protien"
FT   mat_peptide     628..>936
FT                   /product="NIa protein"
XX
SQ   Sequence 936 BP; 276 A; 209 C; 226 G; 225 T; 0 other;
     gctgttgaga gcaaactatg tggtttcacc tttgtttttc cagatgatga taaaattggt        60
     cttgaaggca aggggaacaa ataccgccct cgcgaagacg ctcgcctgat gtactccact       120
     agagaggacg ccacccttga cgcctggaat gagaaagcga aggaaagacg taagaaggta       180
     accgacaaag ctgagccaga gcttcggcga gcctacgaga agagaccata cttcaatttc       240
     tacgaccttc aaacagatag caacattctg gaagctattt tctacaccac tgaaggcgat       300
     gagtttttcc gaacagcaga ccctaataag gacatgaact tggttgctga taaactacgc       360
     tcctttctcg atacaaagct tgttgttgga caccatcagc ggaagctact agaagaaaca       420
     gctgcggttg ttattaggga tacaaaggga actgtgcaca acatggaaat ttcacagcat       480
     gatccagatt ttctgaagca gaatgggtcc ggcaaagttg ggtatccaga acaccgagga       540
     cagtttcggc aggaaggagt tgccatcaca gcggattacg atcttgaagc tgagtttggc       600
     gccgacaccg atgaaataac gcttgaggcc tctactggaa ttttattgtc acaagttggg       660
     gtcgatgttg caactcgagt tggaagaatt tgcattggca ctttcaatat gaactgttac       720
     ttctatagcg actggattct agttccagga cacctgcaag acagatctgg caacgtaaca       780
     attcaattcc ctgaccaaac agtgcaaacc acaactgacg cactcaacgc aaatggtgtg       840
     aaacgattct atggattaga tgtgatagca attcgtcgcc ctgctgcttt gcggcctcgc       900
     accaagttgg tcaaagcttt tgctattgag gaacca                                 936
//