ID   AJ517471; SV 1; linear; mRNA; STD; VRL; 936 BP.
XX
AC   AJ517471;
XX
DT   11-SEP-2003 (Rel. 77, Created)
DT   19-SEP-2003 (Rel. 77, Last updated, Version 2)
XX
DE   Barley yellow mosaic virus partial gene for polyprotein, genomic RNA1,
DE   isolate HKL, strain 1
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KW   14 kDa protein; NIa protein; polyprotein; VPg protein.
XX
OS   Barley yellow mosaic virus
OC   Viruses; Riboviria; Potyviridae; Bymovirus.
XX
RN   [1]
RP   1-936
RA   Kanyuka K.;
RT   ;
RL   Submitted (19-NOV-2002) to the INSDC.
RL   Kanyuka K., Plant-Pathogen Interactions Division, Rothamsted Research,
RL   Harpenden, Hertfordshire, AL5 2JQ, UNITED KINGDOM.
XX
RN   [2]
RX   DOI; 10.1099/vir.0.19347-0.
RX   PUBMED; 13679620.
RA   Kuehne T., Shi N., Proeseler G., Adams M., Kanyuka K.;
RT   "The ability of a bymovirus to overcome the rym4-mediated resistance in
RT   barley correlates with a codon change in the VPg coding region on RNA1.";
RL   J. Gen. Virol. 84(Pt 10):2853-2859(2003).
XX
DR   MD5; e6536d5cfee7393c3845a5945fc2be84.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..936
FT                   /organism="Barley yellow mosaic virus"
FT                   /host="Hordeum vulgare"
FT                   /strain="1"
FT                   /isolate="HKL"
FT                   /mol_type="mRNA"
FT                   /country="Germany:Hoeckelheim"
FT                   /db_xref="taxon:12465"
FT   CDS             <1..>936
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /note="RNA1"
FT                   /db_xref="GOA:Q70WH1"
FT                   /db_xref="InterPro:IPR001730"
FT                   /db_xref="UniProtKB/TrEMBL:Q70WH1"
FT                   /protein_id="CAD57005.1"
FT                   /translation="AVESKLCGFTFVFPDDDKIGLEGKGNKYRPREDARLMYSTREDAT
FT                   FDAWNEKAKERRKKVTDKAEPELRRAYEKRPYFNFYDLQTDSNILEAIFYTTEGDEFFR
FT                   TADPNRDMNLVADKLRSFLDTKLVVGHHQRKLLEETANVVIKDTKGTAHKMEISQHDPD
FT                   FLKQNGSGKVGYPEHRGQFRQEGVAVTGDYDLEAEFGADADEITLEASTGILLSQVGVD
FT                   VATRVGRICIGTFNMNCYFYSDWILVPGHLQDRSGNVTIQFPDQTVQTTTDALNANGVK
FT                   RFYGLDVIAIRRPAILRPRTKLVKAFAIEEP"
FT   mat_peptide     <1..66
FT                   /product="14 kDa protein"
FT   mat_peptide     67..627
FT                   /product="VPg protein"
FT   mat_peptide     628..>936
FT                   /product="NIa protein"
XX
SQ   Sequence 936 BP; 279 A; 204 C; 226 G; 227 T; 0 other;
     gctgttgaga gcaaactatg tggcttcact tttgtttttc cagatgatga taaaattggt        60
     cttgaaggca agggaaacaa ataccgccct cgcgaagacg ctcgcctgat gtactccact       120
     agagaagacg ccacctttga cgcctggaat gagaaagcga aggaaagacg caagaaagta       180
     accgacaaag ctgagccaga gcttcggaga gcctatgaga agagaccata tttcaatttc       240
     tacgaccttc aaacagatag caacattctg gaagctattt tctacaccac tgaaggtgat       300
     gagtttttcc gaacagcaga ccctaacagg gacatgaact tggttgctga taaactgcgc       360
     tcttttctcg atacaaagct tgttgttgga caccatcagc ggaagctact agaagaaaca       420
     gctaatgttg ttatcaagga cacgaaggga actgcgcaca agatggaaat ttcacagcat       480
     gatccagatt ttctgaagca gaatgggtcc ggcaaagttg ggtatccaga acaccgagga       540
     cagtttcggc aggaaggagt tgccgtcaca ggggattacg atcttgaagc cgagtttggc       600
     gccgatgctg atgaaataac gcttgaggcc tctactggaa ttttattgtc acaagttggg       660
     gtcgatgttg caactcgggt tggaagaatt tgcattggca ctttcaatat gaactgttac       720
     ttctatagcg actggattct agttccagga cacctgcaag atagatctgg caacgtaaca       780
     attcaattcc ctgaccaaac agtgcaaacc acaaccgacg cactcaacgc aaatggtgtg       840
     aaacgattct atggattaga tgtaatagca attcgtcgcc ctgctatctt gcggcctcgc       900
     accaagttgg tcaaagcttt tgctattgag gaacca                                 936
//