ID AJ515488; SV 1; linear; mRNA; STD; VRL; 3516 BP. XX AC AJ515488; XX DT 11-SEP-2003 (Rel. 77, Created) DT 19-SEP-2003 (Rel. 77, Last updated, Version 2) XX DE Barley yellow mosaic virus 2 gene for polyprotein 2, genomic RNA, isolate DE BRZ XX KW 2 gene; P1 protein; P2 protein; polyprotein 2. XX OS Barley yellow mosaic virus OC Viruses; Riboviria; Potyviridae; Bymovirus. XX RN [1] RP 1-3516 RA Adams M.J.; RT ; RL Submitted (07-NOV-2002) to the INSDC. RL Adams M.J., Plant Pathogen Interactions Division, Rothamsted Research, RL Harpenden, Herts AL5 2JQ, UNITED KINGDOM. XX RN [2] RX DOI; 10.1099/vir.0.19347-0. RX PUBMED; 13679620. RA Kuehne T., Shi N., Proeseler G., Adams M., Kanyuka K.; RT "The ability of a bymovirus to overcome the rym4-mediated resistance in RT barley correlates with a codon change in the VPg coding region on RNA1."; RL J. Gen. Virol. 84(Pt 10):2853-2859(2003). XX DR MD5; 1195749ed188abe868bbffffd404e8e5. XX FH Key Location/Qualifiers FH FT source 1..3516 FT /organism="Barley yellow mosaic virus" FT /host="Hordeum vulgare" FT /strain="2 (resistance-breaking)" FT /isolate="BRZ" FT /mol_type="mRNA" FT /country="United Kingdom:Oxfordshire" FT /isolation_source="Brize Norton" FT /db_xref="taxon:12465" FT 5'UTR <1..117 FT CDS 118..2790 FT /gene="2" FT /product="polyprotein 2" FT /db_xref="GOA:Q70WR8" FT /db_xref="InterPro:IPR001456" FT /db_xref="InterPro:IPR031159" FT /db_xref="InterPro:IPR036417" FT /db_xref="InterPro:IPR042308" FT /db_xref="UniProtKB/TrEMBL:Q70WR8" FT /protein_id="CAD56480.1" FT /translation="MSTSSSRLFFDCGSLDWPNKSLFGDPTTRDVMDEHISSTWNAVIR FT RHMLAPNADAETVLGRDGLPSAQFDAYGAMLPSFIQALNAPTTRLRISAPLSTAESILC FT ADASHAPWLYMANSVCAYEATHLQPVQTFIAFNFAHGYCYLSLFIPLSFRITPENARSF FT SRFLEQLPDILGAYPTLASLYKTMLFAVRLFPEVLQAPIPIIGKRPGVLQFHVSDARGL FT PPSWFPMKCGSVASFIALITNNLNSDLLNGIVGSNGDGEHYTNWNSGHDHWIVNRFITV FT KDLHSSLKSALEVDLDTEGGRNAVLDLLLDLGVTNLVRREKRFPAYFQGAESVYLLLSC FT ERVGNELVAVQDALQEPLANYTGKDLRALIINLGGLPSRHPEICYTRNIFENDNHLVWN FT FEFYRIASITKNAQIDRDVLSSSMANLFSDFVSESSNGEYRVKEPRPVTQYRVEHDEPV FT ASGAPTAWWQVLVGITTAILGAIIFFLWRCFLRAKRVKFQAKDSFPWFTTSGDDDLPPP FT PGDSPSRPPGRSPDRVLPRTVVRDLSFNDDDDLHSVDLNEAGSRFGEVVSLIARGNLRE FT LAGAIPESLSNLTLLQTSASGSGFYTMVALYLATLGDAITAFHEHNDASPATIQSLRTL FT ELQLEARGLRFNEAGTPANLIQRGVKSSVGRALVRLTQSALLATGENFRTRMAATLERI FT AAERLNTLTAYDQRVIEMTTELLAAIKTALEVERSELTPHLANAEALLQVYNNLFSTDY FT ASASLLALRREMILRSAEGRVGEQPTSASDAANEELVQRSMTKLDKEIELFQAQIDSQR FT RAVTITEASNLRENILQPINTVANIAMAGAFLRGGARHRMPGIPDVAAPMSNPFRAFSG FT RGHSLTTTRGASLFRRPRV" FT mat_peptide 118..882 FT /gene="2" FT /product="P1 protein" FT mat_peptide 883..2787 FT /gene="2" FT /product="P2 protein" FT 3'UTR 2791..>3516 XX SQ Sequence 3516 BP; 877 A; 879 C; 773 G; 987 T; 0 other; aacaaacaca aacatcgcac gctccccagg ctcacaacac ttgtagagtg atttctgtca 60 tcctactgtt tgtaagctct ccagcgaatc aactcgctcg ctctcaaatt ctccaccatg 120 tctacttcca gctcacggtt attctttgac tgtggcagtc ttgattggcc aaataaaagc 180 ttatttggcg accccacaac acgagatgtg atggacgaac acatttccag cacgtggaat 240 gcggttatta ggaggcacat gttggctccc aacgccgacg ccgaaaccgt attgggccgt 300 gatggtttac catctgctca atttgacgcg tatggagcca tgctacctag ctttatccaa 360 gctctaaacg caccaacaac gcgtcttcga atcagcgcac cgctgtccac cgccgagtcc 420 attttgtgcg ctgatgcatc tcacgctcct tggttgtaca tggcaaacag tgtgtgcgca 480 tacgaggcaa ctcatttgca gcctgtacaa actttcatcg cctttaactt cgcacatggt 540 tattgctacc tcagtctttt cataccacta agctttcgca ttacccccga gaatgctcga 600 agtttcagtc ggttccttga gcagcttccc gacattttag gtgcgtatcc aacattggcc 660 tcactatata aaacaatgtt atttgctgtt aggcttttcc cagaggtgct acaagctcca 720 atccccatta ttggaaaaag gcctggtgtg ctacaattcc atgttagtga tgccagagga 780 ctgccacctt cgtggttccc catgaagtgc ggcagtgtag catctttcat agcgcttatt 840 accaacaacc ttaacagcga tttgcttaat gggattgttg gttcaaacgg tgatggtgag 900 cactacacaa attggaactc tgggcatgat cactggattg tgaatcgatt tataacagtc 960 aaggatttac atagcagttt aaaatcagct ctagaagttg atttggacac agaaggtggg 1020 cgaaacgctg ttctcgattt gcttctagat cttggagtca ctaatcttgt tcgaagagag 1080 aaacgtttcc cagcatattt ccagggagct gaaagcgtat acctgcttct ttcatgtgaa 1140 agagtcggga acgagctggt tgctgtgcaa gatgctcttc aggaaccatt agctaattat 1200 actggaaagg atttgagagc tctcatcatc aatcttggcg gtttaccaag cagacaccct 1260 gaaatttgtt acacacgtaa catctttgaa aatgataatc acctggtttg gaattttgag 1320 ttttaccgaa tagcctcaat tacgaagaat gcacaaattg atagagatgt ccttagctca 1380 tccatggcga acttatttag tgactttgtt tcagagtcat caaatggtga gtacagagtt 1440 aaggaaccaa gacctgttac tcagtacagg gttgagcatg atgaaccagt tgctagtggt 1500 gccccaactg cttggtggca agttcttgtt ggcatcacca ccgccattct gggcgcaata 1560 atattctttc tttggaggtg tttcttgcgt gctaagcgtg tcaaattcca ggcaaaggat 1620 tccttcccat ggtttaccac gtctggtgat gatgacctcc cgcccccccc tggtgattcc 1680 ccatcacgcc ctcctgggcg cagcccggat cgagttcttc cacgtacagt tgttcgagat 1740 ctcagcttca atgatgatga tgatttacac agtgttgatc ttaacgaagc tgggtcgcgt 1800 tttggggagg ttgtctcttt aattgcaagg ggaaatctcc gcgagctagc tggtgcgatt 1860 cctgaatctc ttagcaactt aactctcctt caaacgagtg caagtggatc tggcttttac 1920 actatggtgg ctctgtacct tgccacttta ggggatgcta tcactgcatt tcatgagcat 1980 aatgatgctt cacctgccac aattcaatca ctgcgcacgc tcgagcttca gcttgaagcc 2040 cgtggtttgc gtttcaatga agctggtaca cccgcaaatc tcattcagag gggcgttaaa 2100 tcttctgttg gtagagcact tgtgcgacta acacagagtg ctcttctggc cactggtgag 2160 aactttcgga cacgcatggc agccacactt gaaagaattg ctgctgagcg cctcaacacg 2220 ttaaccgcct atgatcagcg agtcatcgag atgacaactg aactcctagc agcaatcaag 2280 actgctcttg aagtcgagcg cagtgaactc actccacatc tcgcaaacgc cgaggctctg 2340 cttcaagttt acaacaatct ctttagcacc gattatgctt cagcatcgct gcttgctctt 2400 agacgcgaga tgattcttag gagtgctgaa gggcgtgttg gagaacagcc aactagtgct 2460 tctgatgcgg ctaatgagga attagtccaa cgttccatga caaagttgga taaggaaatt 2520 gagttattcc aagcacaaat tgatagccag cgtcgcgctg tcaccatcac tgaagcatcc 2580 aatctcagag aaaacatatt gcagccgatc aacaccgttg cgaatattgc catggctgga 2640 gcttttctgc gtgggggcgc gcgccatcgc atgccaggga taccagatgt ggctgcgccc 2700 atgtccaacc cttttcgagc tttctcaggg aggggacatt cactcacaac aactcgaggt 2760 gctagtcttt tccgacgccc tcgagtttag tttttccatt atagcactat ttactttccg 2820 ccgccctagc ataatttaga tcaacattat ccatttcttc ctcctttcac catctgcaca 2880 ccgctgccat taatatggta gagttagcgg ttcatccccc gctacgctca acatctccat 2940 ccttagatca cctgcaaaca cataaaatac caaaaatacc atttatcatt ctgtctcaag 3000 cgccagcatt ttaaattacc cgcaattgca ttatcgtttt gccatcaaag tatggttcgt 3060 ttcatcaaca tctgctcgca tgattgggtg tatggggcca gtgttgtttt gggtatggaa 3120 attgattggt gagaaattga ttcttctcac catgagtttt ccaggggata agctcggtgc 3180 tacagctagc ggctgtatcc ttcgcgatgc cccaaaccac aaaacactac tgattcttag 3240 gaattagcct ttcaaatatc ccaactgcaa tgagcacgat agcattgcat cttcactcaa 3300 ggtccggtta gagtccctgg caggtgtggg ctacaggagc atgtgaatgc tgctctgtca 3360 ccatctgtcg tctgcggtct ctatctagca ttacgagtga agccacgtct ttaaatcccc 3420 agcatgttta ctttatgttc tgcatagaaa acgtcacatc tgtgatacaa aaacatgcaa 3480 tacgtgccca tcattggtcg cgggttgcag tctgac 3516 //