ID AJ515487; SV 1; linear; mRNA; STD; VRL; 3586 BP. XX AC AJ515487; XX DT 11-SEP-2003 (Rel. 77, Created) DT 19-SEP-2003 (Rel. 77, Last updated, Version 2) XX DE Barley yellow mosaic virus 2 gene for polyprotein 2, genomic RNA, isolate DE HAT XX KW 2 gene; P1 protein; P2 protein; polyprotein 2. XX OS Barley yellow mosaic virus OC Viruses; Riboviria; Potyviridae; Bymovirus. XX RN [1] RP 1-3586 RA Adams M.J.; RT ; RL Submitted (07-NOV-2002) to the INSDC. RL Adams M.J., Plant Pathogen Interactions Division, Rothamsted Research, RL Harpenden, Herts AL5 2JQ, UNITED KINGDOM. XX RN [2] RX DOI; 10.1099/vir.0.19347-0. RX PUBMED; 13679620. RA Kuehne T., Shi N., Proeseler G., Adams M., Kanyuka K.; RT "The ability of a bymovirus to overcome the rym4-mediated resistance in RT barley correlates with a codon change in the VPg coding region on RNA1."; RL J. Gen. Virol. 84(Pt 10):2853-2859(2003). XX DR MD5; d58b652f840adfa09a452fe32cc0d133. XX FH Key Location/Qualifiers FH FT source 1..3586 FT /organism="Barley yellow mosaic virus" FT /host="Hordeum vulgare" FT /strain="2 (resistance-breaking)" FT /isolate="HAT" FT /mol_type="mRNA" FT /country="United Kingdom:Gloucestershire" FT /isolation_source="Hatherop" FT /db_xref="taxon:12465" FT 5'UTR 1..155 FT CDS 156..2828 FT /gene="2" FT /product="polyprotein 2" FT /db_xref="GOA:Q70WR9" FT /db_xref="InterPro:IPR001456" FT /db_xref="InterPro:IPR031159" FT /db_xref="InterPro:IPR036417" FT /db_xref="InterPro:IPR042308" FT /db_xref="UniProtKB/TrEMBL:Q70WR9" FT /protein_id="CAD56479.1" FT /translation="MSTSSSRLFFDCGSLDWPNKSLFGDPTTRDVMDEHISSTWNAVIR FT RHMLAPNADAETILGRDGLPSAQFDAYGAMLPSFIQALNAPTTRLRISAPLSTAESILC FT ADASHAPWLYMANSVCAYEATHLQPVQTFIAFNFAHGYCYLSLFIPLSFRITPENARSF FT SRFLEQLPDILGAYPTLAALYKTMLFAVKLFPEVLQAPIPIIAKRPGVLQFHVSDARGL FT PPSWFPMKCGSVASFIALITNNLNSDLLNGIVGSNGDGEHYTNWNSGHDHWIVHRFITV FT KDLHSSLKSALEVDLDTEGGRNAVLDLLLDLGVTNLVRREKRFPAYFQGAESVYLLLSC FT ERVGNELVAVQDALQEPSANYTGKDLRALIINLGGLPSRHPEICYTRNIFENDNHLVWN FT FEFYRIASITKNAQIDRDVLSSSMANLFSDFVSESSHGEYRVKEPRPVTQYRVEHDEPV FT ASGAPSAWWQVLIGITTAILGAIIFFLWRCFLRAKRVKFQAKDSFPWFTTSGDDDLPPP FT PGDSPSRPPGRSPDRVLPRTVVRDLSFNDDDDLHSVDLNEAGSRFGEVVSLNARGNLRE FT LAGANPESLSNLTLLQTSASGSGFYTMVALYLATLGDAITAFHEHNDASPATIQSLRTL FT ELQLEARGLRFNEAGTPANLIQRGVKSSVGRALVRLTQSALLATGENFRTRMAATLERI FT AAERLNTLTAYDQRVIEMTTELLAAIKTALEVERSELTPHLANAEALLQVYNNLFSTDY FT ASASLLALRREMILRSAEGRVGEQPTSASDAANEELVQRSMTKLDKEIELFQAQIDSQR FT RAVTITEASNLRENILQPINTVANIAMAGAFLRGGARHRMPGIPDVAAPMSNPFRAFSG FT RGHSLTTTRGAGLFRRPRV" FT mat_peptide 156..920 FT /gene="2" FT /product="P1 protein" FT mat_peptide 921..2825 FT /gene="2" FT /product="P2 protein" FT 3'UTR 2829..3586 XX SQ Sequence 3586 BP; 910 A; 910 C; 788 G; 978 T; 0 other; aaaaataaag caaccccaaa ccaaaacaaa caaaacgaaa caaacacaaa catcgcacgc 60 tcctcaggct cacaatactt gtagagtgat ttctgtcatc ctactgtttg taagcttccc 120 agcaaatcaa cccgcttgct ttcaaaccct ccaccatgtc tacttccagc tcacggttat 180 tctttgactg tggcagtctt gattggccaa ataaaagctt atttggcgat cccactacac 240 gagatgtgat ggacgaacac atttccagca cgtggaatgc ggttattagg aggcacatgt 300 tggcgcccaa cgctgacgcc gaaaccatat tgggccgtga tggtttacca tccgctcagt 360 ttgacgctta tggagccatg ctacctagtt tcattcaagc tctaaacgca cccacaacgc 420 gtctccgaat cagcgcaccg ctgtccaccg ccgagtccat tttatgcgcc gatgcgtccc 480 acgctccttg gttgtacatg gcaaacagtg tgtgcgcata tgaggcaacc catttgcagc 540 ctgtacaaac ttttatcgct ttcaacttcg cgcatggcta ttgctacctc agtcttttca 600 taccactaag ctttcgcatc acccccgaga atgctcgaag ttttagtcgg ttccttgagc 660 agcttcccga cattttaggt gcgtacccaa cattggccgc actgtataaa acaatgctat 720 ttgctgttaa gcttttccca gaggtgctac aagctccaat acccattatt gcaaaaagac 780 ctggtgtgct acaattccac gttagtgatg ctagagggct accaccatca tggttcccca 840 tgaaatgtgg cagtgtagca tctttcatag cgcttatcac caacaacctg aacagcgatt 900 tgcttaatgg gattgttggt tcaaacggtg atggtgagca ctacacaaat tggaactctg 960 ggcacgatca ctggattgtg catcgattta taacagtcaa ggatttgcat agcagtttaa 1020 aatcagcttt ggaagttgac ttggacacag agggcgggcg aaacgccgtt ctcgatttgc 1080 ttctagatct tggggtcact aatcttgttc gaagagagaa acgttttcca gcatatttcc 1140 agggagctga gagcgtatat ctgcttctat catgcgagag agttgggaac gaattagttg 1200 ctgtgcaaga tgctctgcag gaaccatcag ctaattatac tggaaaggat ttgagagctc 1260 tcattatcaa tcttggcggt ttaccaagca gacaccctga aatttgttac acacgtaaca 1320 tctttgaaaa tgataatcat ctggtttgga attttgagtt ttaccgaata gcttcaatta 1380 cgaagaatgc acaaattgac agagatgtcc tgagctcatc catggcgaac ttatttagtg 1440 actttgtttc agagtcatca catggtgagt acagagttaa ggaaccaagg cctgtcactc 1500 agtacagggt tgagcatgat gaaccagttg ctagtggcgc cccatctgct tggtggcaag 1560 ttctcattgg catcaccacc gctattctgg gcgcaataat attctttctt tggaggtgtt 1620 tcttgcgtgc taagcgtgtc aaattccagg caaaggattc cttcccatgg tttaccacgt 1680 ctggtgatga tgatctcccg cccccccctg gtgattcccc gtcacgccct cctgggcgca 1740 gcccggatcg agttcttcca cgcacagttg ttcgagatct cagcttcaat gatgacgatg 1800 atttacacag tgttgatctt aacgaagctg ggtcgcgttt tggggaggtt gtctctttga 1860 atgcaagggg aaatctccgc gagctagctg gtgcgaatcc tgaatctctt agcaacttaa 1920 ctctccttca aacgagtgca agtggatctg gcttttacac tatggtggct ctgtaccttg 1980 ccactttagg ggatgctatc actgcatttc atgagcataa tgatgcttca cctgccacaa 2040 ttcaatcact gcgcacgctc gagcttcagc ttgaagcccg tggtttgcgt ttcaatgaag 2100 ctggcacacc cgcaaatctc attcagaggg gcgttaaatc ttctgttggt agagcacttg 2160 tgcgactaac acagagtgct cttctggcca ctggtgagaa ctttcggaca cgcatggcag 2220 ccacacttga aagaatcgct gctgagcgcc tcaacacgtt aaccgcctat gatcagcgag 2280 tcatcgagat gacaactgaa ctcctagcag caatcaagac tgctcttgaa gtcgagcgca 2340 gtgaactcac tccacatctc gcaaacgccg aggctctgct tcaagtttac aataatctct 2400 ttagcaccga ttatgcctca gcatcgctgc ttgctcttag gcgcgagatg attcttagga 2460 gtgctgaagg gcgtgttgga gaacagccaa ctagtgcttc tgatgcggct aatgaggaat 2520 tagtccaacg ttctatgaca aagttggata aggaaattga gttattccaa gcacaaattg 2580 atagccagcg tcgcgctgtc accatcactg aagcatccaa tctcagagaa aacatattgc 2640 agccgatcaa caccgttgcg aatattgcca tggctggagc ttttctgcgt gggggcgcgc 2700 gccatcgcat gccagggata ccagatgtgg ctgcgcccat gtccaaccct tttcgagctt 2760 tctcagggag gggacattca ctcacaacaa ctcgaggtgc tggtcttttc cgacgccctc 2820 gagtttagtt tctccattat agcactatct actttccgcc gccctagcat aatttagatc 2880 aacattatcc atttcttcct cctttcacca tctgcacacc gctgccatta atatggtaga 2940 gttagcggtt catcccccgc tacgctcaac atctccatcc ttagatcacc tgcaaacaca 3000 taaaatacca aaaataccat ttatcattct gtctcaagcg ccagcattat aaattacccg 3060 caactgcatt atcgttttgc catcaaagta tggttcgttt catcaacatc tgctcgcatg 3120 attgggtgta tggggccagt gttgttttgg gtatggaaat tgattggtga gaaattgatt 3180 cttctcacca tgagttttcc aggggataag ctcggtgcta cagctagcgg ctgtatcctt 3240 cgcgattccc cacaccacaa aacaccactg attcttagga attagccttt caaatatccc 3300 aactgcaatg agcacgatag cattgcatct tcactcaagg tccggttaga gtccctggca 3360 ggtgtgggct acaggagcat gtgaatgctg ctctgtcacc atctgtcgtc tgcggtctct 3420 atctagcact acgagtgaag ccacgtcttt aaatccccag catgtttact ttatgttctg 3480 catagaaaac gtcacatctg tgatacaaaa acatgcaata cgtgcccatc attggtcgcg 3540 ggttgcagtc tgacgaacaa caacctttgt acacaggaaa tgtgac 3586 //