ID AJ515486; SV 1; linear; mRNA; STD; VRL; 3586 BP. XX AC AJ515486; XX DT 11-SEP-2003 (Rel. 77, Created) DT 19-SEP-2003 (Rel. 77, Last updated, Version 2) XX DE Barley yellow mosaic virus 2 gene for polyprotein 2, genomic RNA, isolate DE EST XX KW 2 gene; P1 protein; P2 protein; polyprotein 2. XX OS Barley yellow mosaic virus OC Viruses; Riboviria; Potyviridae; Bymovirus. XX RN [1] RP 1-3586 RA Adams M.J.; RT ; RL Submitted (07-NOV-2002) to the INSDC. RL Adams M.J., Plant Pathogen Interactions Division, Rothamsted Research, RL Harpenden, Herts AL5 2JQ, UNITED KINGDOM. XX RN [2] RX DOI; 10.1099/vir.0.19347-0. RX PUBMED; 13679620. RA Kuehne T., Shi N., Proeseler G., Adams M., Kanyuka K.; RT "The ability of a bymovirus to overcome the rym4-mediated resistance in RT barley correlates with a codon change in the VPg coding region on RNA1."; RL J. Gen. Virol. 84(Pt 10):2853-2859(2003). XX DR MD5; e27bf2fca782444d76f3e022ceac7170. XX FH Key Location/Qualifiers FH FT source 1..3586 FT /organism="Barley yellow mosaic virus" FT /host="Hordeum vulgare" FT /strain="1 (common)" FT /isolate="EST" FT /mol_type="mRNA" FT /country="United Kingdom:Gloucestershire" FT /isolation_source="Eastleach" FT /db_xref="taxon:12465" FT 5'UTR 1..156 FT CDS 157..2829 FT /gene="2" FT /product="polyprotein 2" FT /db_xref="GOA:Q70WS0" FT /db_xref="InterPro:IPR001456" FT /db_xref="InterPro:IPR031159" FT /db_xref="InterPro:IPR036417" FT /db_xref="InterPro:IPR042308" FT /db_xref="UniProtKB/TrEMBL:Q70WS0" FT /protein_id="CAD56478.1" FT /translation="MSTSSSRLFFDCGSLDWPNKSLFGDPTTRDVMDEHISSTWNAVIR FT RHMLALNADAETILGRDGLPSAQFDAYGAMLPSFIQALNAPTRRLRISAPLSTAESILC FT ADASHAPWLYMANSVCAYEATHLQPVQTFIAFNFAHGYCYLSLFIPLSFRITPENARSF FT SRFLEQLPDILGAYPTLAALYKTMLFAVKLFPEVLQAPIPIIAKRPGVLQFHVSDARGL FT PPSWFPMKCGSVASFIALITNNLNSDLLNGNVGSNGDGEHYPNWNSGHNHWIVNRFIAV FT KDLHSSLKSALEVDLDTEGGRNVVLDLLLDLGVTNLVRREKRFPAYFQGAESVYLLLSC FT ERVGNELVAVQDALQEPSANYTGKDLRALIINLGGLPSRHPEICYTRNIFENDNHLVWN FT FEFYRIASITKNAQIDRDVLSSSMANLFSDFVSESSHGEYRVKEPRPVTQYRVEHDEPV FT ASGAPSAWWQVLIGITTAILGAIIFFLWRCFLRAKRVKFQAKDSFPWFTTSGDDDLPPP FT PGDSPSRPPGRSPDRVLPRTVVRDLSFNDDDDLHSVDLNEAGSRFGEVVSLIARGNLRE FT LAGAIPESLSNLTLLQTSASGSGFYTMVALYLATFRDAITAFHEHNDASPATIQSLRTL FT ELQLEARGLRFNEAGTPANLIQRGVKSSVGRALVRLAQSALFATGENFRTRMAATLERI FT AAERLNTLTAYDQRVIEMTTELLAAIKTALEVERSELTPHLANAEALLQVYNNLFSTDY FT ASASLLALRREMILRSAEGRVGEQPTSASDAANEELVQRSMTKLDKEIELFQAQIDSQR FT RAVTITEASNLRENILQPINTVANIAMAGAFLRGGARHRMPGMPDVAAPMPNPFRAFSG FT RGHSLTTTRGAGLFRRPRV" FT mat_peptide 157..921 FT /gene="2" FT /product="P1 protein" FT mat_peptide 922..2826 FT /gene="2" FT /product="P2 protein" FT 3'UTR 2830..3586 XX SQ Sequence 3586 BP; 912 A; 890 C; 791 G; 993 T; 0 other; aaaaaataaa acaaccctaa accaaaacaa acaaaacgaa acaaacacaa acatcacacg 60 ctccccaggc tcacaatact tgtagagtga tttctgtcat cctactgttt gtaagcttcc 120 cagcaaatca acccgcttgc ttttaaaccc tccaccatgt ctacttccag ctcacggcta 180 ttctttgact gtggcagtct tgattggcca aataaaagct tatttggcga tcccacaaca 240 cgagatgtga tggacgaaca catttccagc acgtggaatg cggttattag gaggcacatg 300 ttggcgctca acgctgacgc tgaaaccata ttgggccgtg atggtttacc atccgctcag 360 tttgacgctt atggagccat gctacctagt ttcattcaag ctctaaacgc acccacaagg 420 cgtctccgaa tcagcgcacc gttgtccacc gccgagtcca ttttatgcgc cgatgcatct 480 cacgctcctt ggttgtacat ggcaaacagt gtgtgcgcat acgaggcaac tcatttgcag 540 cctgtacaaa cttttatcgc tttcaacttc gcgcatggtt attgctacct cagtcttttc 600 ataccactaa gctttcgcat cacccccgag aatgctcgaa gttttagtcg gttccttgag 660 cagcttcccg acattttagg tgcgtaccca acattggccg cactgtataa aacaatgcta 720 tttgctgtta agcttttccc agaggtgcta caagctccaa tccccattat tgcaaaaagg 780 cctggtgtgc tacaattcca cgttagtgat gctagagggc taccaccatc atggttcccc 840 atgaaatgtg gcagtgtagc atctttcata gcgcttatca ccaacaacct gaacagcgat 900 ttgcttaatg ggaatgttgg ttcaaacggt gatggtgagc actacccaaa ttggaactct 960 gggcataatc actggattgt gaatcgattt atagcagtca aggatttgca cagcagttta 1020 aaatcagctt tggaagttga cttggacaca gagggcgggc gaaacgtcgt tctcgatttg 1080 cttctagatc ttggggtcac taatcttgtt cgaagagaga aacgttttcc agcatatttc 1140 cagggagctg agagcgtata tctgcttcta tcatgcgaga gagttgggaa cgaattagtt 1200 gctgtgcaag atgctctgca ggaaccatca gctaattata ctggaaagga tttgagagct 1260 ctcattatca atcttggcgg tttaccaagc agacaccctg aaatttgtta cacacgtaac 1320 atctttgaaa atgataatca tctggtttgg aattttgagt tttaccgaat agcttcaatt 1380 acgaagaatg cacaaattga cagagatgtc ctgagctcat ccatggcgaa cttatttagt 1440 gactttgttt cagagtcgtc acatggtgag tacagagtta aggaaccaag gcctgtcact 1500 cagtacaggg ttgagcatga tgaaccagtt gctagtggcg ccccatctgc ttggtggcaa 1560 gttctcattg gcatcaccac cgctattctg ggcgcaataa tattctttct ttggaggtgt 1620 ttcttgcgtg ctaagcgtgt gaaattccag gcaaaggatt cctttccttg gttcaccacg 1680 tctggtgatg atgacctccc acctcctcct ggtgattccc cgtcacgccc tcctgggcgc 1740 agtccagatc gagttctccc acgtacagtt gttcgagacc tcagcttcaa tgatgatgat 1800 gacttacaca gtgttgatct taacgaagct gggtcgcgtt ttggggaggt tgtctcttta 1860 attgcaaggg gaaatctacg cgagctagct ggtgcgattc ctgaatctct tagcaactta 1920 acgctccttc aaacgagtgc aagtggatct ggtttctaca cgatggtggc tctgtacctt 1980 gccactttta gggatgctat tactgcattc catgagcata atgatgcttc acctgccaca 2040 attcaatcac tgcgaacgct tgagcttcag cttgaagccc gtggtttgcg tttcaatgaa 2100 gctggcacac ccgcaaatct cattcagagg ggcgttaaat cttctgttgg tagagcactt 2160 gtgcgactag cacagagtgc tctttttgcc actggtgaga actttcggac acgcatggca 2220 gccacacttg aaagaatcgc tgctgagcgt ctcaacacgt taaccgccta tgatcagcga 2280 gtcattgaaa tgacaactga gctcctagca gcaattaaaa ctgctcttga ggtcgagcgc 2340 agtgaactca ctccacatct cgcaaacgcc gaggctctgc ttcaagttta caataatctc 2400 tttagcaccg attacgcctc agcatcgctg cttgctctta ggcgcgaaat gattcttagg 2460 agtgctgaag ggcgtgttgg agagcagccc actagtgctt ctgatgcggc taatgaggaa 2520 ttggtccaac gttctatgac aaagctggat aaggaaattg agttattcca agcacaaatt 2580 gatagccagc gtcgcgctgt aaccatcact gaagcatcca atcttagaga gaatatattg 2640 cagccaatca acaccgttgc aaacattgct atggctggag cttttctgcg tgggggcgcg 2700 cgccatcgca tgccagggat gccagacgtg gctgcaccca tgccaaaccc ttttcgagct 2760 ttctcaggga ggggacattc gctcacaaca actcgaggtg ctggtctttt ccgacgccct 2820 cgagtttaga gtttccatta tagcagtatt tactttccgc cgccctagca taatttagat 2880 caacattatc catttctccc tccttccgcc atctgcacac cgctgccatt aatatggtag 2940 agttagtggt tcatcccctg ctacgctcaa catctccatc cttagatcac ctgcaaacac 3000 ataaaatacc aaaaatacca ttcatcattc tgtttcaaac gccagcattt taaattaccc 3060 gcaattgcat tatcgtttta ccatcaaagt atggttcgtt tcatcaacat ctgctcgcgt 3120 gattgggtgt atggggccag tgttgttttg ggtatggaat ttgattgatg agaaattgat 3180 tcttcttgcc atgagttttc caggggataa gttcggtgct acagctacgg ctgtatcctt 3240 cgcgatgccc cacaccacaa aacatcactg attcttagga attagccttt caaatatccc 3300 aactgcaatg agcacgatag cattgcatct tcactcaagg tccggttaga gtccctggca 3360 ggtgtgggct acaggagcat gtgaatgctg ctctgtcacc atctgtcgtc tgcggtctct 3420 atctagcact gcgagtgaag ccacgtcttt aaatccccag catgtttact ttatgttctg 3480 catagaaaac gtcacatctg tgatacaaaa acatgcaata cgtgcccatc atcggtcgcg 3540 ggttgcagtc tgacgaacaa caacctttgt acacaggaaa tgtgac 3586 //