ID AJ514833; SV 1; linear; mRNA; STD; VRL; 3923 BP. XX AC AJ514833; XX DT 28-AUG-2003 (Rel. 77, Created) DT 11-JUN-2004 (Rel. 80, Last updated, Version 2) XX DE Pelargonium flower break carmovirus complete genome XX KW coat protein; CP gene; p12 gene; p27 gene; p7 gene; p86 gene; p99 gene. XX OS Pelargonium flower break virus OC Viruses; Riboviria; Tombusviridae; Procedovirinae; Alphacarmovirus. XX RN [1] RP 1-3923 RA Hernandez C.; RT ; RL Submitted (25-OCT-2002) to the INSDC. RL Hernandez C., Inst. de Biologia Mol. y Cel. de Plantas, Csic, Avenida de RL los Naranjos S/N, 46022 Valencia, SPAIN. XX RN [2] RX DOI; 10.1007/s00705-003-0231-5. RX PUBMED; 14991450. RA Rico P., Hernadez C.; RT "Complete nucleotide sequence and genome organization of Pelargonium flower RT break virus"; RL Arch. Virol. 149(3):641-651(2004). XX DR MD5; 9383138ad7d775c7eea34b64588ccb0c. DR EuropePMC; PMC1563836; 16873268. DR EuropePMC; PMC434078; 15220437. XX FH Key Location/Qualifiers FH FT source 1..3923 FT /organism="Pelargonium flower break virus" FT /host="Pelargonium zonale" FT /lab_host="Chenopodium quinoa" FT /isolate="MZ10" FT /mol_type="mRNA" FT /country="Spain:Madrid" FT /db_xref="taxon:35291" FT CDS 33..2648 FT /transl_except=(pos:762..764,aa:OTHER) FT /transl_except=(pos:2301..2303,aa:OTHER) FT /gene="p99" FT /product="p99 protein" FT /function="unknown" FT /note="read through stop codons" FT /db_xref="GOA:Q70WU2" FT /db_xref="InterPro:IPR002166" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:Q70WU2" FT /protein_id="CAD55834.1" FT /translation="MLRFGSQLVVGSTLIGGLTAVGLAGLSVRATIGVVEFNLRCARVV FT GDIIRDPFNALPSAPLFPGPSVEVFAEEVRKDLEPELEAKDYLVIHEEKEMDEEGKSKV FT VRQRSTVNRHKKGRFVHRLVCDGKNHFGGTPSASRANELAVMKYLVGKCREHHLVVQHT FT REVCSLAMAAIFTPDHHEVNMVREMNSHAAYRRRVALADASRVHSWQQELLRSPLSWNA FT WGRAWWIANGLPDREPVRFTKXGGLFCLEGVETGVRRGTHPQMIEVEKNSPPKLRKLFA FT QRLVSSGVEYRVHNHSFQNLRRGLLERVFYVEENKQLVSCPCPEKGAFKEMGYLRKQFV FT RLTPKHARISAKEFVDCYHGRKKSVYEFAAMTLSERPLDRKDASLKTFIKAEKFCKADP FT APRVIQPRSPRYNVELGRYLKKFEHTAYRTLDKIWGGKTVMKGYSVDEIGKHISEAWDS FT FHSPVAVGFDMSRFDQHVSVPALQFEHSCYLACFPGDQHLAELLSWQLKNSGVGFASNG FT MVRYKKDGCRMSGDMNTALGNCLLACLITRHLMKDINCRLVNNGDDCVLFLDKKDLPFV FT VSNLTTGWRRFGFKCIAEEPVYELEHVRFCQMAPVYDGSQYVMLRDPFVSMSKDSFSLT FT HWNTTKNAKQWMKSVGICGERITGGLPVVQEYYRKYQEIAGDVKFSHSLEITSSGTYRL FT AQNSSRAYGSVSEMARFSFFLAFGVIPDAQIALEKHIRDMPVAAEFGPDESLADHTIEW FT LLKXSFLIWVVIMRLTCQWEDVGTGVNRRVRYPSQRTLSPNGHLMVVMGVLGLLWLRPF FT RSIYTSTFSMPPLINLQHILNLTLLSLILSSFILAERVTHNHYSNDNSKAQYIRISTGQ FT " FT CDS 33..2303 FT /transl_except=(pos:762..764,aa:OTHER) FT /gene="p86" FT /product="p86 protein" FT /function="putative RNA dependent RNA polymerase" FT /note="read through stop codon" FT /db_xref="GOA:Q70WU1" FT /db_xref="InterPro:IPR002166" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:Q70WU1" FT /protein_id="CAD55835.1" FT /translation="MLRFGSQLVVGSTLIGGLTAVGLAGLSVRATIGVVEFNLRCARVV FT GDIIRDPFNALPSAPLFPGPSVEVFAEEVRKDLEPELEAKDYLVIHEEKEMDEEGKSKV FT VRQRSTVNRHKKGRFVHRLVCDGKNHFGGTPSASRANELAVMKYLVGKCREHHLVVQHT FT REVCSLAMAAIFTPDHHEVNMVREMNSHAAYRRRVALADASRVHSWQQELLRSPLSWNA FT WGRAWWIANGLPDREPVRFTKXGGLFCLEGVETGVRRGTHPQMIEVEKNSPPKLRKLFA FT QRLVSSGVEYRVHNHSFQNLRRGLLERVFYVEENKQLVSCPCPEKGAFKEMGYLRKQFV FT RLTPKHARISAKEFVDCYHGRKKSVYEFAAMTLSERPLDRKDASLKTFIKAEKFCKADP FT APRVIQPRSPRYNVELGRYLKKFEHTAYRTLDKIWGGKTVMKGYSVDEIGKHISEAWDS FT FHSPVAVGFDMSRFDQHVSVPALQFEHSCYLACFPGDQHLAELLSWQLKNSGVGFASNG FT MVRYKKDGCRMSGDMNTALGNCLLACLITRHLMKDINCRLVNNGDDCVLFLDKKDLPFV FT VSNLTTGWRRFGFKCIAEEPVYELEHVRFCQMAPVYDGSQYVMLRDPFVSMSKDSFSLT FT HWNTTKNAKQWMKSVGICGERITGGLPVVQEYYRKYQEIAGDVKFSHSLEITSSGTYRL FT AQNSSRAYGSVSEMARFSFFLAFGVIPDAQIALEKHIRDMPVAAEFGPDESLADHTIEW FT LLK" FT CDS 33..764 FT /gene="p27" FT /product="p27 protein" FT /function="putative polymerase associated protein" FT /db_xref="GOA:Q70WU0" FT /db_xref="UniProtKB/TrEMBL:Q70WU0" FT /protein_id="CAD55836.1" FT /translation="MLRFGSQLVVGSTLIGGLTAVGLAGLSVRATIGVVEFNLRCARVV FT GDIIRDPFNALPSAPLFPGPSVEVFAEEVRKDLEPELEAKDYLVIHEEKEMDEEGKSKV FT VRQRSTVNRHKKGRFVHRLVCDGKNHFGGTPSASRANELAVMKYLVGKCREHHLVVQHT FT REVCSLAMAAIFTPDHHEVNMVREMNSHAAYRRRVALADASRVHSWQQELLRSPLSWNA FT WGRAWWIANGLPDREPVRFTK" FT CDS 2288..2494 FT /gene="p7" FT /product="p7 protein" FT /function="putative movement protein" FT /db_xref="GOA:Q70WT9" FT /db_xref="InterPro:IPR007982" FT /db_xref="UniProtKB/TrEMBL:Q70WT9" FT /protein_id="CAD55837.1" FT /translation="MASKVIVPDLGSDNEIDVSVGGRGNRGKQKGKISVAKDAVSKRTS FT DGGNGGSWVVVAETVSVNIHFNF" FT CDS 2328..2648 FT /gene="p12" FT /product="p12 protein" FT /function="putative movement protein" FT /db_xref="GOA:Q70WT8" FT /db_xref="UniProtKB/TrEMBL:Q70WT8" FT /protein_id="CAD55838.1" FT /translation="MRLTCQWEDVGTGVNRRVRYPSQRTLSPNGHLMVVMGVLGLLWLR FT PFRSIYTSTFSMPPLINLQHILNLTLLSLILSSFILAERVTHNHYSNDNSKAQYIRIST FT GQ" FT CDS 2650..3687 FT /gene="CP" FT /product="coat protein" FT /db_xref="GOA:Q70WU3" FT /db_xref="InterPro:IPR000937" FT /db_xref="InterPro:IPR013669" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q70WU3" FT /protein_id="CAD55839.1" FT /translation="MDAYKNDPIVRQAVAKGVAWAAKLNTRGWSSLTTQQKKAARSALS FT VIQSPAVVVPRRTRVRNPVPAGLKSGNGKAGKSSTLTRSEFICNVSSTTGVTPTFQSWI FT INPREVKSFPQSSVCSVGYNKYRITDFRIRFSTSCSDTMNGKVAIGFTPDSSDPVPVDK FT SQLYGMQVYADTPAKESVTLKTAADNTIRFLRDSSSDDAKLVDYGRVVLATYGFDSTAP FT SVIGELFFEYTVVYLDPTYVVALTQHGTLTTSSGPPYATLTTTATSTSMELNTHGKWLV FT VWVSADEVINSPVISGSGASGSVTVVSDAQTTVVAVVTANLPGAIISNTSTAAPSSLEW FT YVSRL" XX SQ Sequence 3923 BP; 992 A; 927 C; 1084 G; 920 T; 0 other; gggatacctt acactcggta tctggttcca acatgctacg attcggatct cagttggtgg 60 tgggttccac cttaatcggt ggtctcactg ctgtcgggct ggcaggcctg agcgtgcgtg 120 ctacaatagg tgtagtggaa ttcaacctcc gctgtgctag agtggtgggt gacattatac 180 gtgacccatt taatgccctc ccttcggccc ctctattccc cgggcccagc gttgaggttt 240 tcgctgagga ggtgaggaag gacctcgagc cggagcttga ggctaaggat tacctcgtca 300 tccacgagga aaaagaaatg gatgaggagg ggaagagcaa ggtggttagg cagaggtcta 360 ctgtcaaccg ccacaagaag ggccggtttg tacaccggct agtctgtgat gggaaaaacc 420 actttggtgg gaccccttca gctagccggg ccaacgagct ggcagtgatg aagtatctcg 480 tgggtaagtg ccgcgagcac cacttagtgg tgcagcacac ccgcgaagtc tgctctctgg 540 cgatggctgc catttttacc ccggaccacc atgaagtaaa catggttagg gaaatgaaca 600 gccacgccgc ctaccgaaga agggtagccc ttgcagatgc ctccagagtc catagctggc 660 agcaggagct actccgctca cccctgagtt ggaacgcttg ggggagggcg tggtggatag 720 ccaacgggct tcctgacagg gagcctgttc ggttcaccaa ataggggggt cttttctgcc 780 tcgagggtgt tgaaacagga gtccgtaggg ggacgcaccc acagatgatc gaggtagaga 840 aaaactcccc cccgaaactt aggaaactct tcgcccaacg attggttagc agtggagttg 900 aataccgcgt gcataaccac tcgtttcaaa acctaaggcg aggtctgctt gagagagttt 960 tctacgtgga agaaaacaag cagttagtgt cgtgtccctg tccggaaaaa ggggccttta 1020 aggagatggg ttacctacga aagcagttcg ttagacttac tcccaaacat gccaggatct 1080 cagcaaagga atttgttgat tgctatcatg gtaggaagaa gagtgtctac gagtttgcag 1140 ccatgaccct ttctgagagg cctttggacc gcaaggatgc cagcttgaag acgttcataa 1200 aggccgagaa attttgcaag gccgacccag ctccccgggt tatacaacca agaagtccgc 1260 gctataacgt tgaattaggc cgatatctca agaaattcga acacacggcc tacagaacgc 1320 tggacaaaat ctggggagga aagaccgtaa tgaaagggta ctctgtagat gagataggga 1380 aacatatctc agaggcgtgg gattcattcc actctccggt tgctgtcgga ttcgacatga 1440 gccggttcga ccagcacgtt agtgtgcctg cgcttcaatt cgaacacagt tgttaccttg 1500 cctgttttcc cggagatcag catttggcgg aactcttgag ctggcagctc aagaattctg 1560 gtgtagggtt cgcgtcaaat ggaatggtca gatataagaa ggatgggtgt agaatgtctg 1620 gagacatgaa cactgcactg ggaaactgcc tattggcttg cctcataacg aggcacctca 1680 tgaaggacat aaattgtcga ctcgtcaata acggggatga ctgtgtattg ttcttggaca 1740 agaaggacct cccattcgtc gtgagtaatt taacgacggg ctggcgtagg tttgggttca 1800 agtgcattgc agaggagcca gtatacgagc tagagcacgt gaggttttgc cagatggccc 1860 cagtgtatga tggatcgcaa tacgtcatgt tgcgtgatcc gtttgtgtcc atgtcaaaag 1920 atagtttctc actcacccat tggaacacca caaagaatgc caaacaatgg atgaaatccg 1980 tgggcatctg tggtgagagg attacaggtg ggttaccagt tgtgcaagaa tactacagga 2040 agtaccagga aattgctgga gacgtgaagt tctctcattc cctagagata acttcatcag 2100 gaacgtacag gttagcccag aattcttctc gggcctatgg ttcagttagc gagatggcgc 2160 gttttagttt cttcctggcg tttggagtta tcccagatgc ccagattgcc ttagagaaac 2220 acataagaga catgcccgtc gcagctgaat ttgggcccga tgaaagtctg gcagaccaca 2280 caattgaatg gcttctaaag tgatcgttcc tgatttgggt agtgataatg agattgacgt 2340 gtcagtggga ggacgtggga acaggggtaa acagaagggt aagatatccg tcgcaaagga 2400 cgctgtctcc aaacggacat ctgatggtgg taatgggggt tcttgggttg ttgtggctga 2460 gaccgtttcg gtcaatatac acttcaactt ttagcatgcc ccctctgata aacctccagc 2520 acatattgaa tcttactttg ttgtccctga ttctaagttc tttcatcttg gcagagagag 2580 taacgcacaa tcactactca aacgacaaca gcaaagcgca atacatacgg atctcaactg 2640 ggcaataaca tggacgccta caagaatgac ccaatagtta ggcaggcagt ggcaaaggga 2700 gtagcttggg cggctaagct gaacactaga gggtggtctt cattgacaac ccaacagaag 2760 aaggctgcgc gctcagctct gtctgtgata caatccccag cggtggttgt acctcgcaga 2820 accagagtac gaaacccagt acccgcgggc ctgaaatcag ggaatggcaa ggcagggaaa 2880 agctcaactc taacccgatc ggagtttatc tgcaacgtat cgagcacaac cggggtgacc 2940 ccgactttcc aatcatggat tataaatcct agggaggtca aaagtttccc acaatcttcc 3000 gtctgctcgg ttggctacaa caagtacagg atcacggact tcaggattag gttttctact 3060 tcctgttccg acactatgaa tgggaaggtg gccattggct tcactcctga ctctagcgat 3120 ccggttcctg ttgataagtc acagctgtac gggatgcagg tgtatgccga cactccagca 3180 aaggagtcgg tcaccttgaa gacggctgca gataacacga ttaggttcct gcgggattca 3240 tccagcgatg atgccaagct ggtggattat ggccgcgtag ttttagccac atacggtttc 3300 gatagcacag ctccatcagt aataggagag ctgttcttcg agtacaccgt agtttatctc 3360 gaccctacct atgtcgtggc tttaacacaa catggcacgt tgaccacctc atctggcccc 3420 ccatatgcta ccttgaccac cactgccact tcaacatcca tggaattaaa cacccatgga 3480 aagtggctag tggtttgggt ctcggcagac gaggtgatca actctccggt tatatccggg 3540 tccggggcaa gcggatccgt aactgtcgtt agcgacgcac agactactgt tgttgcagtg 3600 gttaccgcaa acttgccagg cgccatcatt tccaacactt caaccgctgc cccttcgtca 3660 ctggagtggt atgtatctag gctatgagag ggcagtcacc ctaccttctg ccagaggttc 3720 ccggaggagt agtgatcctt tgggggtgat tcatagctag gaaaggtcgg agagttggga 3780 ggaggccaac tgggggaggt gctaggagca ccagatgcag cagagcaaaa atccgggttt 3840 catcgcctgg tgcgggcgct caatgctgct aacacgttcc tgaaggaaga aaggtttcgg 3900 tcgatggaga ccttaacccg ccc 3923 //