ID   AJ512959; SV 1; circular; genomic DNA; STD; VRL; 1383 BP.
XX
AC   AJ512959;
XX
DT   25-JUN-2004 (Rel. 80, Created)
DT   25-JUN-2004 (Rel. 80, Last updated, Version 1)
XX
DE   Nanovirus-like particle rep gene for replication associated protein, clone
DE   F92-1
XX
KW   rep gene; replication associated protein.
XX
OS   Nanovirus-like particle
OC   Viruses; Alphasatellitidae; Geminialphasatellitinae;
OC   unclassified Begomovirus-associated alphasatellites.
XX
RN   [1]
RP   1-1383
RA   Briddon R.W.;
RT   ;
RL   Submitted (25-OCT-2002) to the INSDC.
RL   Briddon R.W., Dept. of Disease and Stress Biology, John Innes Centre, Coney
RL   Lane, Norwich, NR4 7UH, UNITED KINGDOM.
XX
RN   [2]
RX   DOI; 10.1016/j.virol.2004.03.041.
RX   PUBMED; 15207631.
RA   Briddon R.W., Bull S.E., Amin I., Mansoor S., Bedford I.D., Rishi N.,
RA   Siwatch S.S., Zafar Y., Abdel-Slalam A.M., Markham P.G.;
RT   "Diversity of DNA 1: a satellite-like molecule associated with monopartite
RT   begomovirus-DNA beta complexes";
RL   Virology 324(2):462-474(2004).
XX
DR   MD5; f0736ef84fe3910736ab393c7099cab7.
DR   EuropePMC; PMC2922188; 20678232.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1383
FT                   /organism="Nanovirus-like particle"
FT                   /host="Ageratum conyzoides"
FT                   /mol_type="genomic DNA"
FT                   /country="India"
FT                   /clone="F92-1"
FT                   /tissue_type="leaf"
FT                   /db_xref="taxon:96892"
FT   CDS             79..1026
FT                   /gene="rep"
FT                   /product="replication associated protein"
FT                   /function="involved in initiation of rolling circle
FT                   replication"
FT                   /db_xref="GOA:Q6HA14"
FT                   /db_xref="InterPro:IPR000605"
FT                   /db_xref="InterPro:IPR003365"
FT                   /db_xref="UniProtKB/TrEMBL:Q6HA14"
FT                   /protein_id="CAD56272.1"
FT                   /translation="MAALKGQWWCFTIFFLSATAPDLVPLFENTHVSYACWQEEESPTT
FT                   RRRHLQGYLQLKGQRTLNQVKAIFGDLKPHLEKQRARKTDEACDYCMKEETRVSGPFEF
FT                   GEYCPAGSHKRRQRESVIRSPVRMAEENPSVFRRVKAKIAEEEFQKSAHEIQISNLKSW
FT                   QLRLKTLLDRDPDDRTIIWVYGPIGGEGKSTFARDLYRSGSWFYTRGGSADNVSYQYIG
FT                   CLENNIVFDIPRDKKDYLQYSLIEMFKDRLIVSNKYEPLMAPLINCIHVVVMSNFLPDF
FT                   EKISMDRVHVILCIPCGVCLKHHIHEIKCDEYLD"
XX
SQ   Sequence 1383 BP; 429 A; 244 C; 310 G; 400 T; 0 other;
     accccgcctc gagaccccga gttagagacc tgtccgtaca attgttcttc ttttcttaaa        60
     tactcctatc ttagtaacat ggccgccctc aaaggtcaat ggtggtgttt cactatcttc       120
     ttcctgtccg ctactgctcc agatttggta cccttgttcg aaaacacaca cgttagttac       180
     gcctgctggc aagaggaaga gtctcccacg actcgacgtc gccacctgca ggggtatctc       240
     caattgaagg gtcagaggac gttgaaccag gtgaaggcta tatttgggga tttaaagccc       300
     catcttgaga aacagcgagc tcgtaagaca gacgaagctt gcgactattg tatgaaagag       360
     gaaactaggg tttccggtcc atttgaattt ggggaatact gtcctgctgg ttctcacaaa       420
     cgccgacaaa gggaaagcgt aattcgatct ccggtgagaa tggctgagga aaatccttct       480
     gttttccgac gagtcaaggc aaagattgct gaggaagaat tccagaagag cgctcatgag       540
     attcaaattt caaatttgaa atcttggcaa ttgcgcttaa agacgctcct cgacagggac       600
     ccagatgatc gcactatcat ctgggtatat ggacccattg gtggggaagg aaaatccacc       660
     tttgctaggg acctatatag aagtgggtcc tggttctata cacgtggtgg ctctgctgat       720
     aatgttagct accagtacat aggatgttta gaaaataata ttgtatttga tatccctcgt       780
     gataagaagg attatctaca atacagttta attgagatgt ttaaggatag gttaatagtt       840
     agtaataagt atgagcctct tatggcccca ttaattaatt gtattcatgt tgtagttatg       900
     tctaattttc tccctgattt tgagaagatt agtatggata gggtccatgt aatcctatgt       960
     attccttgtg gtgtgtgtct taaacatcac attcatgaaa ttaaatgtga tgagtatttg      1020
     gattaatttt gtttctttaa aaaaagaaag aatgaaatga aaaaaaatat aaatactgaa      1080
     tcatatgtta ttattattat gagaaatagg gccccgcagg gtcataaaaa aatagttttg      1140
     tttctttaaa aaaagaaata atgaaatgaa ataaattaaa taacaacaaa aaatacaacg      1200
     ccaaaactca gggtttataa tgtgggccat actaagtgcg ctagatgaga gagaaaatgc      1260
     aatttggtac tgtagcaaca cggagggact aaagttgtaa ttaatgaaag tgtggggact      1320
     tctgtgtaaa tatccttggg tacccaggct ataaataaca cgtcacgagg cgggtgtagt      1380
     att                                                                    1383
//