ID   AJ512957; SV 1; circular; genomic DNA; STD; VRL; 1379 BP.
XX
AC   AJ512957;
XX
DT   25-JUN-2004 (Rel. 80, Created)
DT   25-JUN-2004 (Rel. 80, Last updated, Version 1)
XX
DE   Nanovirus-like particle rep gene for replication associated protein, clone
DE   G2-8
XX
KW   rep gene; replication associated protein.
XX
OS   Nanovirus-like particle
OC   Viruses; Alphasatellitidae; Geminialphasatellitinae;
OC   unclassified Begomovirus-associated alphasatellites.
XX
RN   [1]
RP   1-1379
RA   Briddon R.W.;
RT   ;
RL   Submitted (25-OCT-2002) to the INSDC.
RL   Briddon R.W., Dept. of Disease and Stress Biology, John Innes Centre, Coney
RL   Lane, Norwich, NR4 7UH, UNITED KINGDOM.
XX
RN   [2]
RX   DOI; 10.1016/j.virol.2004.03.041.
RX   PUBMED; 15207631.
RA   Briddon R.W., Bull S.E., Amin I., Mansoor S., Bedford I.D., Rishi N.,
RA   Siwatch S.S., Zafar Y., Abdel-Slalam A.M., Markham P.G.;
RT   "Diversity of DNA 1: a satellite-like molecule associated with monopartite
RT   begomovirus-DNA beta complexes";
RL   Virology 324(2):462-474(2004).
XX
DR   MD5; 8fd6cf0589d09141f190c6cf67616bc4.
DR   EuropePMC; PMC2922188; 20678232.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1379
FT                   /organism="Nanovirus-like particle"
FT                   /host="Gossypium hirsutum"
FT                   /mol_type="genomic DNA"
FT                   /country="India"
FT                   /clone="G2-8"
FT                   /tissue_type="leaf"
FT                   /db_xref="taxon:96892"
FT   CDS             76..1023
FT                   /gene="rep"
FT                   /product="replication associated protein"
FT                   /function="involved in initiation of rolling circle
FT                   replication"
FT                   /db_xref="GOA:Q6HA16"
FT                   /db_xref="InterPro:IPR000605"
FT                   /db_xref="InterPro:IPR003365"
FT                   /db_xref="UniProtKB/TrEMBL:Q6HA16"
FT                   /protein_id="CAD56270.1"
FT                   /translation="MPALKAQWWCFTIFFVSAAAPDLVPLFENTHVSYACWQEEESPTT
FT                   RRRHLQGYLQLKGQRTLNQVKVIFGELKPHLEKQRARRTDEARDYCMKEETRVSGPFEF
FT                   GDYCPGGSHKRRLRESVIRSPVRMAEENPSVFRRVKAKLAEEEFQKSAHEIQISNLKSW
FT                   QTRLKTLLERAPDDRTIFWVYGPNGGEGKSTFARDLYRSGTWFYTRGGSADNVAYQYIG
FT                   CLGNNIVFDIPRDKKDYLQYSLIEMFKDRLIVSNKYEPLMAPLINCIHVVVMSNFMPDF
FT                   EKISQDRVHVIPCRPCGVCLKHHIIEMKCDDYMD"
XX
SQ   Sequence 1379 BP; 401 A; 274 C; 322 G; 382 T; 0 other;
     accccgcctc gagaccccga gctagagacc tgtccgtaca ttccttcttc tcttcttata        60
     tttcgctaag taagaatgcc tgccctcaaa gcacagtggt ggtgtttcac catcttcttc       120
     gtttctgctg ctgcccccga cctggtgccc ttgttcgaga acacgcacgt tagttacgct       180
     tgctggcagg aggaagagtc tcccacgact cgacgccgcc acctccaagg ctacctgcaa       240
     ttgaagggtc agagaaccct taaccaggta aaggttatct ttggggagtt gaaaccccat       300
     cttgagaagc agcgagctcg ccgtactgac gaagctcgtg actattgcat gaaggaagaa       360
     actagggttt ccggtccctt tgaatttggg gattattgcc ctggtgggtc ccacaaacgc       420
     cggctaaggg aatcggtgat tcgaagtccg gtgagaatgg ccgaggagaa tccgtccgtt       480
     ttcagacgag ttaaagccaa gcttgctgag gaagaattcc agaagagcgc gcatgagatt       540
     caaatttcga atttgaaatc ctggcagacc cgcctaaaga cgctcctcga aagggccccg       600
     gatgaccgca ctatcttctg ggtttatggg cccaatggtg gtgaaggaaa atcgacattc       660
     gcgcgagatc tctacagaag tgggacctgg ttctatacac gtggaggatc tgcagataat       720
     gtagcttacc agtacatagg gtgtttagga aataatattg tattcgatat ccctcgtgat       780
     aagaaggatt acctgcaata tagtttaata gagatgttta aggatagatt aatagttagt       840
     aataagtatg agcctcttat ggctcccttg attaattgta ttcatgtagt tgtaatgtct       900
     aattttatgc ctgactttga gaagattagt caggatagag tccatgtaat cccttgtagg       960
     ccatgtggtg tttgtcttaa acaccacatt attgaaatga aatgcgatga ttatatggat      1020
     taattactgt gttttgtttc ttttaacaaa agaaagaatg aaatgaaaaa aaaaaataaa      1080
     cgaaccatct cactactatt tcaattattg aagaagtgcc gcgcagcggc attcaaaaaa      1140
     aacaaagaat aaaaaagaat ataaaatata tttattattt tatgcatacg acgtcgtatg      1200
     catagaataa tactgtttgg ggttaaaaca taaatatgtg aaacatccgt gcttgcggag      1260
     caaaacttga gaaagatgcg gttaagcgct gaaaacatct ttggtcttca ggggtatgct      1320
     tgtgcaaata ttttggtctc tcggttataa ataacacgtc acgaggcggg tgtagtatt       1379
//