ID   AJ512950; SV 1; circular; genomic DNA; STD; VRL; 1375 BP.
XX
AC   AJ512950;
XX
DT   25-JUN-2004 (Rel. 80, Created)
DT   25-JUN-2004 (Rel. 80, Last updated, Version 1)
XX
DE   Nanovirus-like particle rep gene for replication associated protein, clone
DE   SB9-1
XX
KW   rep gene; replication associated protein.
XX
OS   Nanovirus-like particle
OC   Viruses; Alphasatellitidae; Geminialphasatellitinae;
OC   unclassified Begomovirus-associated alphasatellites.
XX
RN   [1]
RP   1-1375
RA   Briddon R.W.;
RT   ;
RL   Submitted (24-OCT-2002) to the INSDC.
RL   Briddon R.W., Dept. of Disease and Stress Biology, John Innes Centre, Coney
RL   Lane, Norwich, NR4 7UH, UNITED KINGDOM.
XX
RN   [2]
RX   DOI; 10.1016/j.virol.2004.03.041.
RX   PUBMED; 15207631.
RA   Briddon R.W., Bull S.E., Amin I., Mansoor S., Bedford I.D., Rishi N.,
RA   Siwatch S.S., Zafar Y., Abdel-Slalam A.M., Markham P.G.;
RT   "Diversity of DNA 1: a satellite-like molecule associated with monopartite
RT   begomovirus-DNA beta complexes";
RL   Virology 324(2):462-474(2004).
XX
DR   MD5; f25c2ec9fcf798e63aec16bcdf0b5c53.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1375
FT                   /organism="Nanovirus-like particle"
FT                   /host="Hibiscus"
FT                   /mol_type="genomic DNA"
FT                   /country="Pakistan"
FT                   /clone="SB9-1"
FT                   /tissue_type="leaf"
FT                   /db_xref="taxon:96892"
FT   CDS             80..1027
FT                   /gene="rep"
FT                   /product="replication associated protein"
FT                   /function="involved in initiation of rolling circle
FT                   replication"
FT                   /db_xref="GOA:Q6HA19"
FT                   /db_xref="InterPro:IPR000605"
FT                   /db_xref="InterPro:IPR003365"
FT                   /db_xref="UniProtKB/TrEMBL:Q6HA19"
FT                   /protein_id="CAD56263.1"
FT                   /translation="MAALKAQWWCFTVFFLSATAPDLVPLFENTHVSYACWQEEESPTT
FT                   RRRHLQGYLQLKGQRTLNQVKAIFGDLKPHLEKQRARKTDDARDYCMKEETRVSGPFEF
FT                   GEYCPAGSHKRRQRELVIRSPVRMAEENPSVFRRVKAKIAEEEFQKSAPEIQISNLKSW
FT                   QLRLKTLLDRDPDDRTIIWVYGPTGGERKSTFARDLYRSGSWFYTRGGSADNVAYQYIG
FT                   CLGNNIVFDIPRDKKDYLQYSLIEMFKDRLIVSNKYEPLMAPLINCIHADVMSNFLPDS
FT                   EKISNDRVHVIPCIPCGVCLKHHIHEIKCDEYLD"
XX
SQ   Sequence 1375 BP; 416 A; 252 C; 312 G; 395 T; 0 other;
     accccgcctc gagaccccga gttagagacc tgtccgtaca tttgttcttc ttctcttata        60
     ttattctttc tgaataaaca tggccgccct caaagctcaa tggtggtgtt tcactgtctt       120
     ctttctgtcc gctacggctc cggatttggt gcccctgttc gagaacacac acgttagtta       180
     cgcctgctgg caagaggaag agtctcccac gactcgacgt cgccacctgc aggggtatct       240
     ccaattgaag ggtcagagga ccttgaacca agtgaaggct atatttgggg atttgaagcc       300
     ccatcttgag aaacagcgag ctcgtaagac agacgatgct cgcgattatt gtatgaaaga       360
     ggaaactagg gtttccggcc cctttgaatt tggggaatac tgtcctgctg gttctcacaa       420
     acgccgacaa agggaactcg taattcgatc tccggtgaga atggcagagg aaaatccgtc       480
     cgtattccga cgagtcaagg caaagattgc tgaggaagaa ttccagaaga gcgctcctga       540
     gattcaaatt tcaaatttga aatcttggca attgcgcctg aagacgctcc ttgacaggga       600
     cccagatgac cgcactatca tctgggtata tggacccact ggtggggaaa gaaagtccac       660
     ctttgccagg gacctgtaca gaagtgggtc ctggttctat acacgtggag gatctgcaga       720
     taatgtagct taccagtaca taggatgttt aggcaataat attgtatttg atatccctcg       780
     tgataagaag gattatctac aatatagttt aatagagatg tttaaggata ggttaatagt       840
     tagtaataag tacgagcctc ttatggcccc attaattaat tgcatacatg ccgatgttat       900
     gtctaatttt ctccctgatt ctgagaagat tagtaatgat agggtccatg taattccttg       960
     tattccttgt ggtgtttgtc ttaaacatca cattcatgaa attaaatgtg atgagtattt      1020
     ggattaattt tgtttcttta aaaaaagaaa gaatgaaatg aaaaaaaaga aatattgaat      1080
     ccatattgta ttattcttat aaaaaatagt gccccgcagg ggcatctgtt aaaaatattt      1140
     tgtttcttta aaaaaagaaa gaatgaaatg aaaaaaatgg atataaaaaa aataaaaaac      1200
     tcaaggttta taatgtgggc catactaagt gcgctagatg agagagaaaa tgaaattggt      1260
     tactgttcca acacggaggg actaaagttg ttattattgt aagtttggga ctgttgtgta      1320
     aatattcttg ggtacccagg atataaatac cacgtcacga ggcgggtgta gtatt           1375
//