ID AJ511989; SV 1; linear; genomic RNA; STD; VRL; 3052 BP. XX AC AJ511989; XX DT 21-NOV-2002 (Rel. 73, Created) DT 28-JUL-2004 (Rel. 80, Last updated, Version 3) XX DE Cucumber mosaic virus 2a gene for RNA dependent RNA polymerase and 2b gene DE for VIGS supressor, genomic RNA XX KW 2a gene; 2b gene; RNA dependent RNA polymerase; VIGS supressor. XX OS Cucumber mosaic virus (cucumber mosaic cucumovirus) OC Viruses; Riboviria; Bromoviridae; Cucumovirus. XX RN [1] RP 1-3052 RA Diveki Z.; RT ; RL Submitted (14-OCT-2002) to the INSDC. RL Diveki Z., Environmental Biosafety Res. Inst., Agricultural Biotechnology RL Center, Godollo, P.O.Box 411, H-2101, HUNGARY. XX RN [2] RX PUBMED; 15305604. RA Diveki Z., Salanki K., Balazs E.; RT "The necrotic pathotype of the cucumber mosaic virus (CMV) ns strain is RT solely determined by amino acid 461 of the 1a protein"; RL Mol. Plant Microbe Interact. 17(8):837-845(2004). XX DR MD5; 20d2d69a40671c2db55274acb01a276d. DR RFAM; RF01084; TLS-PK3. XX FH Key Location/Qualifiers FH FT source 1..3052 FT /organism="Cucumber mosaic virus" FT /host="Nicotiana glutinosa" FT /strain="Ns" FT /mol_type="genomic RNA" FT /db_xref="taxon:12305" FT CDS 88..2661 FT /gene="2a" FT /product="RNA dependent RNA polymerase" FT /db_xref="GOA:Q8B3N0" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:Q8B3N0" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAD54665.1" FT /translation="MAFPAPAFSLANLLNGSYGVDTPEDVERLRSEQREEAAAACRNYR FT PLPAVDVSESVTEDAHSLRTPDGAPAEAVSDEFVTYGAEDYLEKSDDELLVAFETMVKP FT MRIGQLWCPAFNKCSFISSIAMARALLLAPRTSHRTMKCFEDLVAAIYTKSDFYYSEEC FT EADDAQIDISSRDVPGYSFEPWSRTSGFEPPPICEACDMIMYQCPCFDFNALKKSCAER FT TFADDYVIEGLDGVVDNATLLSNLGPFLVPVKCQYEKCPTPTIAIPPDLNRATDRVDIN FT LVQSICDSTLPTHSGYDDSFHQVFVESADYSIDLDHVRLRQSDLIAKIPDSGHMIPVLN FT TGSGHKRVGTTKEVLTAIKKRNADVPELGDSVNLSRLSKAVAERFFISYINGNSLASSN FT FVNVVSNFHDYMEKWKSSGLSYDDLPDLHAENLQFYDHMIKSDVKPVVSDTLNIDRPVP FT ATITYHKKSITSQFSPLFTALFERFQRCLRERIILPVGKISSLEMAGFDVKNKHCLEID FT LSKFDKSQGEFHLLIQEHILNGLGCPAPITKWWCDFHRFSYIRDRRAGVGMPISFQRRT FT GDAFTYFGNTIVTMAEFAWCYDTDQFEKLLFSGDDSLGFSLLPPVGDPSKFTTLFNMEA FT KVMEPAVPYICSKFLLSDEFGNTFSVPDPLREVQRLGTKKIPYSDNDEFLFAHFMSFVD FT RLKFLDRMSQSCIDQLSIFFELKYKKSGEEAALMLGAFKKYTANFQSYKELYYSDRRQC FT ELINSFCSTEFRVERVNSNKQRKKHGIERRCNDKRRTPTGSYGGGEEAETKVSQAESTG FT TRSQKSQRESAFKSQTVPLSTVLSSRRFGTDRVMPPYECGGVTRA" FT CDS 2420..2752 FT /gene="2b" FT /product="VIGS supressor" FT /db_xref="InterPro:IPR004946" FT /db_xref="UniProtKB/TrEMBL:Q8B3M9" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAD54666.1" FT /translation="MELNVGAMTNVELQLARMVEAKKQRRRSHKQNRRERGHKSPSERA FT RSNLRLFRFLPFYQVDGSELTGSCRHTNVAELPEPEASRLELSAEDHDFDDTDWFAGNE FT WAEGAF" XX SQ Sequence 3052 BP; 774 A; 689 C; 707 G; 882 T; 0 other; gtttatttac aagagcgtac ggttcaaccc ctgcctcccc tgtaaaactc cctagactta 60 aaatttcttc tttctagtat ctttcctatg gctttccctg cccccgcatt ctcactagcc 120 aatcttttga acggcagtta cggtgtcgac actcccgagg atgtggaacg tttgcgatct 180 gagcaacgcg aagaggctgc tgcggcctgt cgtaattaca ggcccttacc cgctgtggat 240 gtcagcgaga gtgtcacaga ggacgcgcat tccctccgaa ctcctgacgg agctcccgct 300 gaggcggtgt ctgatgagtt cgtaacttat ggtgctgaag attaccttga aaaatctgac 360 gatgagctcc ttgtcgcttt tgagacgatg gtcaaaccca tgcgtatcgg acaactatgg 420 tgccctgcgt ttaataaatg ttcttttatt tccagcattg ctatggccag agctttgttg 480 ttggcaccta gaacatccca ccgaaccatg aagtgttttg aagacctggt cgcggctatt 540 tacactaaat ctgatttcta ttacagtgaa gagtgtgaag ccgacgacgc tcagatagat 600 atctcgtctc gcgatgtacc cggttattct ttcgaaccgt ggtcccgaac gtctggattt 660 gaaccgccgc ctatttgtga agcgtgcgac atgatcatgt accagtgccc gtgttttgat 720 ttcaatgctt taaagaaatc gtgcgctgag aggactttcg ctgatgatta tgtcattgaa 780 ggtttagatg gtgttgttga taatgcgact ctgttgtcga atttgggtcc atttttggta 840 cccgtgaaat gtcaatatga aaaatgtcca acaccaacca tcgcgattcc tccggattta 900 aatcgtgcta ctgatcgtgt tgatattaat ttagttcaat ccatttgtga ctcgactctg 960 cccactcata gtggttacga cgactctttt catcaagtgt tcgtcgaaag tgcggactac 1020 tctatagatc tggatcatgt tagacttcga cagtctgatc tcatcgcgaa aattccagat 1080 tcagggcata tgataccggt tctgaacacc gggagcggtc acaagagagt aggtacaacg 1140 aaggaggtcc ttacagcaat taagaaacgt aatgctgacg ttccagagct aggtgattcc 1200 gttaatctgt ctagattgag taaagctgtg gctgagagat tcttcatttc atacatcaat 1260 ggtaactctc tagcatccag taactttgtc aatgtcgtta gtaacttcca cgattacatg 1320 gaaaagtgga agtcctcagg tctttcttat gatgatcttc cggatcttca tgctgagaat 1380 ttgcagtttt atgatcacat gataaaatcc gatgtgaaac ctgtggtgag cgacacactc 1440 aatatcgaca gaccggttcc agctactata acgtatcata agaagagtat aacctcccag 1500 ttctcaccgt tattcacagc gctatttgag cgcttccaga gatgccttcg agaacgtatt 1560 attcttcctg ttggtaagat ttcatccctt gagatggcag gatttgacgt caaaaacaaa 1620 cactgcctcg agattgattt gtctaagttt gataagtctc aaggtgaatt tcatttgcta 1680 attcaggaac acattttgaa tggtctagga tgtccagctc cgataactaa gtggtggtgc 1740 gatttccatc gattctctta catcagagac cgtagagctg gtgttggtat gcctattagt 1800 ttccagagac gaactggtga tgcgttcact tattttggca ataccatcgt caccatggct 1860 gagtttgcct ggtgttatga caccgaccaa ttcgaaaagc tcttattctc aggcgatgat 1920 tctctaggat tttcactgct tccccctgtt ggtgacccga gtaaattcac aactcttttc 1980 aacatggaag ctaaggtgat ggaacctgca gtaccatata tttgttcgaa gttcttactc 2040 tctgacgagt tcggtaacac attttccgtt ccagatccat tgcgcgaggt tcagcggtta 2100 ggaacaaaga aaattcccta ttctgacaat gatgaattct tgtttgctca cttcatgagt 2160 tttgttgatc gattgaagtt tttggaccga atgtctcagt cgtgtatcga tcaactttcg 2220 attttcttcg aattgaaata caagaagtct ggggaagagg ctgctttaat gctaggcgcc 2280 tttaagaagt ataccgctaa tttccagtcc tacaaagaac tctactattc agatcgtcgt 2340 caatgcgaat tgatcaattc gttttgtagt acagagttca gggttgagcg tgtaaattcc 2400 aacaaacaac gaaagaaaca tggaattgaa cgtaggtgca atgacaaacg tcgaactcca 2460 actggctcgt atggtggagg cgaagaagca gagacgaagg tctcacaagc agaatcgacg 2520 ggaacgaggt cacaaaagtc ccagcgagag agcgcgttca aatctcagac tgttccgctt 2580 tctaccgttc tatcaagtag acggttcgga actgacaggg tcatgccgcc atacgaatgt 2640 ggcggagtta cccgagcctg aggcctctcg tttagagtta tcggcggaag accatgattt 2700 tgacgataca gattggttcg ccggtaacga atgggcggaa ggtgctttct gagacctccc 2760 cttccgcatc tccctccggt tttctgaggc gggagctgag ttggcagtat tgctataaac 2820 tgtctgaagt cactaaacac acactgtggt gaacgggttg tccatccagc ttacggctaa 2880 aatggtcagt cgtagagaaa tctacgccag cagacttaca agtctctgag gcacctttga 2940 aaccatctcc taggtttctt cggaaggact tcggtccgtg tacttctagc acaacgtgct 3000 agtctcaggg tacgggtgcc ccccattttg tggggcctcc aaaaggagac ca 3052 //