ID AJ511988; SV 1; linear; genomic RNA; STD; VRL; 3359 BP. XX AC AJ511988; XX DT 21-NOV-2002 (Rel. 73, Created) DT 28-JUL-2004 (Rel. 80, Last updated, Version 3) XX DE Cucumber mosaic virus 1a gene, genomic RNA XX KW 1a gene; 1A protein. XX OS Cucumber mosaic virus (cucumber mosaic cucumovirus) OC Viruses; Riboviria; Bromoviridae; Cucumovirus. XX RN [1] RP 1-3359 RA Diveki Z.; RT ; RL Submitted (14-OCT-2002) to the INSDC. RL Diveki Z., Environmental Biosafety Res. Inst., Agricultural Biotechnology RL Center, Godollo, P.O.Box 411, H-2101, HUNGARY. XX RN [2] RX PUBMED; 15305604. RA Diveki Z., Salanki K., Balazs E.; RT "The necrotic pathotype of the cucumber mosaic virus (CMV) ns strain is RT solely determined by amino acid 461 of the 1a protein"; RL Mol. Plant Microbe Interact. 17(8):837-845(2004). XX DR MD5; fe5ade817985f5913a8ecc956cc23153. DR RFAM; RF01084; TLS-PK3. XX FH Key Location/Qualifiers FH FT source 1..3359 FT /organism="Cucumber mosaic virus" FT /host="Raphanus sativus" FT /strain="Rs" FT /mol_type="genomic RNA" FT /db_xref="taxon:12305" FT CDS 95..3076 FT /gene="1a" FT /product="1A protein" FT /function="putative RNA helicase and methyltransferase FT activities" FT /db_xref="GOA:Q8B3N1" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR021002" FT /db_xref="InterPro:IPR022184" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:Q8B3N1" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAD54664.1" FT /translation="MATSSFNINELVASHGDKGLLATALVDKTAHEQLEEQLQHQRRGR FT KVYIRNVLGVKDSEVIRNRYGGKYDLHLTQQEFAPHGLAGALRLCETLDCLDSFPSSGL FT RQDLVLDFGGSWVTHYLRGHNVHCCSPCLGIRDKMRHAERLMNMRKIILNDPQQFDGRQ FT PDFCTQPAADCKVQAHFAISIHGGYDMGFRGLCEAMNAHGTTILKGTMMFDGAMMFDDQ FT GVIPELNCQWRKIRSAFSETEDVTPLVGKLNSTVFSRVRKFKTMVAFDFINESTMSYVH FT DWENIKSFLTDQTYSYRGMTYGIERCVIHAGIMTYKIIGVPGMCPPELIRHCIWFPSIK FT DYVGLKIPASQDLVEWKTVRILTSTLRETEEIAMRCYNDKKAWMEQFKVILGVLSAKSS FT TIVINGMSMQSGERIDINDYHYIGFAILLHTKMKYEQLGKMYDMWNASSISKWFAALTR FT PLRVFFSSVVHALFPTLRPREEKEFLIKLSTFVTFNEECSFDGGEEWDVISSAAYVATQ FT AVTDGKILAAQKAEKLAEKLAQPVSEVSDSPETSSQTPDDTADVCGREREVSELDSLSA FT QTRSPITRVAERATAMLEYAAYEKQLHDTTVSNLKRIWNMAGGDDKRNSLEGNLKFVFD FT TYFTVDPMVNIHFSTGRWMRPVPEGIVYSVGYNERGLGPKSDGELYIVNSECVICNSES FT LFTVTRSLQAPTGTISRVDGVAGCGKTTAIKSIFEPSTDMIVTANKKSAQDVRMALFKS FT SDSKEACTFVRTADSVLLNECPTVSRVLVDEVVLLHFGQLCAVMSKLKAVRAICFGDSE FT QIAFSSRDASFDMRFSKIIPDETSDADTTFRSPQDVVPLVRLMATKALPKGTHSKYTKW FT VSQSKVRRSVTSRAIASVTLVDLDSSRFYITMTQADKASLISRAKEMNLPKTFWNERIK FT TVHESQGISEDHVTLVRLKSTKCDLFKQFSYCLVALTRHKVTFRYEYCGVLNGDLIAEC FT VARA" XX SQ Sequence 3359 BP; 846 A; 750 C; 814 G; 949 T; 0 other; gtttatttac aagagcgtac ggttcaatcc ctgcctcccc tgtaaaacta ccctttgaaa 60 acctctcttt cttaatcttt tctttgtaat tcctatggcg acgtcctcgt tcaacatcaa 120 tgaattggta gcctcccacg gcgataaagg actactcgcg accgccctcg ttgataagac 180 agctcatgag cagctcgagg agcaattaca gcatcaacgt agaggccgta aggtctacat 240 ccggaacgtt ttgggtgtaa aggattccga ggtcatccgg aatcggtatg gaggaaagta 300 cgacctccat cttacccagc aggagtttgc tccccacggc ctagctggtg ccctccgctt 360 gtgtgaaact ctcgattgtc tagactcttt cccttcatca ggtctgcggc aggacctcgt 420 cttagacttc ggaggaagtt gggtcacaca ttacctccgc ggacataacg tacactgttg 480 ttccccttgt ttgggtatcc gcgataagat gcgccatgcg gaacgcttaa tgaacatgcg 540 caagatcatc ttgaacgatc cacaacagtt cgatggtcgg cagccggatt tctgcactca 600 accggctgcg gattgcaaag tacaagccca ctttgctata tctattcatg gaggttatga 660 tatgggcttt agaggattat gtgaagcgat gaatgctcac ggaaccacta ttttgaaggg 720 aacgatgatg ttcgatggtg cgatgatgtt tgacgaccaa ggtgtaatac ccgaacttaa 780 ttgtcagtgg aggaagatca ggagtgcttt ctccgaaact gaagacgtca caccactggt 840 tggtaagctt aattccacag ttttctcccg cgtgcggaag ttcaagacga tggtagcttt 900 tgatttcatc aacgagtcta ctatgtctta tgttcatgat tgggagaata taaaatcttt 960 tcttacggac cagacttatt cgtaccgagg gatgacttac ggtatcgaac gctgcgttat 1020 ccacgctggt attatgacgt acaagattat cggcgtacct gggatgtgcc cacccgaact 1080 cattcgacat tgtatttggt tcccctctat taaagactat gttggtctaa agatccccgc 1140 gtcgcaggat ttggttgagt ggaaaacagt gcggatttta acgtcaacat tacgtgagac 1200 tgaagagatt gccatgaggt gttataatga taagaaagcg tggatggaac aattcaaggt 1260 tatcctaggt gttctatccg cgaaatcatc taccattgtt attaatggta tgtccatgca 1320 atctggcgag cgaatagaca ttaatgatta tcactacatc ggtttcgcca ttcttcttca 1380 cacaaaaatg aagtacgaac aacttggaaa aatgtatgat atgtggaatg cttcgagtat 1440 ttcgaagtgg tttgccgcgt tgactcgtcc gctgcgtgtg tttttctcca gtgttgttca 1500 cgcactattc ccgactttga gaccccgcga ggaaaaagaa tttctgatca agctctccac 1560 cttcgtgact tttaatgaag agtgctcatt tgacggtgga gaggaatggg acgtgatatc 1620 atccgctgca tacgttgcta cgcaggctgt taccgatggg aagattttgg ctgcgcagaa 1680 agccgagaag cttgctgaga agcttgcaca acccgtgagt gaggtatcgg acagtcctga 1740 gacgtcatct caaacgcctg atgatactgc tgatgtttgt ggaagggagc gagaggtttc 1800 ggaactcgac tccctatcag ctcagacacg ttcccccatc actagagttg ctgaaagggc 1860 tactgctatg ttagagtatg ccgcttatga gaaacaattg cacgacacta cagtgtctaa 1920 tttaaaacgt atttggaaca tggcaggcgg tgatgacaaa agaaactccc tcgagggtaa 1980 tttgaagttt gttttcgata cgtacttcac cgttgatcct atggtgaaca ttcatttctc 2040 cacgggtcgg tggatgcgtc ctgtgcccga gggtattgtt tattctgtcg gttataatga 2100 acgcggttta ggtccgaagt ctgatggaga gctttacatt gtcaatagtg aatgcgtgat 2160 ctgtaacagt gaatctttat tcactgtcac gcgttctctc caagctccaa ccgggaccat 2220 tagtcgagtt gacggagttg ctggttgtgg gaaaaccacg gcaattaaat ccatttttga 2280 gccgtccact gacatgatcg ttaccgcgaa caagaagtcc gcccaagatg tacgtatggc 2340 acttttcaaa tcgtcggatt ccaaagaagc ttgcaccttt gttcgaacag ccgattctgt 2400 cctacttaat gaatgtccga ctgtcagtag ggttttggtt gacgaggtcg ttctgctaca 2460 ctttggtcaa ttatgtgccg tcatgtctaa gttgaaggcc gtgcgagcta tatgttttgg 2520 ggattcggag cagattgcct tttcctcgcg tgatgcctca tttgacatgc gtttctctaa 2580 gattattcct gatgaaacta gtgatgctga caccacattc cgtagcccac aagatgttgt 2640 accgcttgtg cgtttaatgg ctacgaaggc ccttccgaaa ggaacccatt caaaatacac 2700 gaaatgggtt tctcaatcta aagtgagaag atctgttaca tctcgtgcca tcgctagtgt 2760 gacattggtt gacttggatt cttccaggtt ctatataacg atgacccaag ctgataaggc 2820 ctcactgatt tcaagggcga aagagatgaa tctaccaaaa actttctgga atgaaaggat 2880 taaaaccgtg catgagtctc aaggtatttc cgaagaccac gttactttgg taagattaaa 2940 gagtacaaaa tgtgacctgt ttaaacagtt ttcttattgt ctcgttgcac tgacgagaca 3000 caaggtcaca ttccgctacg agtactgtgg tgtattgaac ggcgatttaa tcgccgaatg 3060 tgttgctcgt gcttagcggt ctccctcctt cgggcgggat ctgagttggc ggtaatctgc 3120 aaaccgtctg aagtcactaa acacattgtg tggtgaacgg gttgtccatc cagctaacgg 3180 ctaaaatggt cagtcgtgga gaaatccacg ccagtagact tacaagtctc tgaggcacct 3240 ttgaaaccat ctcctaggtt tcttcggaag gacttcggtc tgtgtacttc tagcacaacg 3300 tgctagtttc agggtacggg tgccccccca ctttcgtggg ggtctctaaa aggagacca 3359 //