ID AJ508785; SV 1; circular; genomic DNA; STD; VRL; 2593 BP. XX AC AJ508785; XX DT 24-SEP-2004 (Rel. 81, Created) DT 27-JUN-2005 (Rel. 84, Last updated, Version 2) XX DE Tomato severe leaf curl virus AV1 gene, AC3 gene, AC2 gene, AC1 gene and DE AC4 gene, isolate NI2 XX KW AC1 gene; AC2 gene; AC3 gene; AC4 gene; AV1 gene; coat protein; KW replication enhancer; replication protein; transcriptional activator. XX OS Tomato severe leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2593 RA Kvarnheden A.; RT ; RL Submitted (24-SEP-2002) to the INSDC. RL Kvarnheden A., Dept of Plant Biology, Swedish Univ of Agricultural RL Sciences, P.O. Box 7080, SE-750 07 Uppsala, SWEDEN. XX RN [2] RX DOI; 10.1007/s00705-005-0509-x. RX PUBMED; 15789265. RA Rojas A., Kvarnheden A., Marcenaro D., Valkonen J.P.T.; RT "Sequence characterization of tomato leaf curl Sinaloa virus and tomato RT severe leaf curl virus: phylogeny of New World begomoviruses and detection RT of recombination"; RL Arch. Virol. 150(7):1281-1299(2005). XX DR MD5; 9c655b2b0364a2bd5dcdb7f08bb6bf4c. XX FH Key Location/Qualifiers FH FT source 1..2593 FT /organism="Tomato severe leaf curl virus" FT /host="Lycopersicon esculentum" FT /isolate="NI2" FT /mol_type="genomic DNA" FT /country="Nicaragua:Santa Lucia" FT /note="component A" FT /db_xref="taxon:92963" FT CDS 186..941 FT /transl_table=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:Q65CF7" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q65CF7" FT /protein_id="CAD48533.1" FT /translation="MPKRDAPWRLMSGTPKVSRSSNYVPPDGLGRKFDKSSAWANRPMY FT RKPRIYRTVRSADVPRGCEGPCKIQSFEQRHDISHTGKVMCISDVTRGNGITHRVGKRF FT CVKSVYILGKIWMDDNIKLKNHTNSVMFWLVRDRRPNGTAMDFGHLFNMFDNEPSTATV FT KNDLRDRFQVMHRFHAKVTGGQYASNEQTLVKRFWRVNQRVTYNNQEAARYENHTENAL FT MLYMACTHASNPVYATLKIRIYFYDSVLN" FT CDS complement(938..1336) FT /transl_table=1 FT /gene="AC3" FT /product="replication enhancer" FT /db_xref="GOA:Q65CF6" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q65CF6" FT /protein_id="CAD48534.1" FT /translation="MDSRTGESITAAQAENSVFIWEVPNPLYFTIISVEDPTYTNTRIY FT HIQIRFNHNLRKELSLHKAYLNYQIWTTSVRASGTNYLSRFKYLVLLYLDRLGVICINN FT VIRAVRFATDKSYVNHVLENYSIKFKIY" FT CDS complement(1083..1469) FT /transl_table=1 FT /gene="AC2" FT /product="transcriptional activator" FT /db_xref="GOA:Q65CF5" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q65CF5" FT /protein_id="CAD48535.1" FT /translation="MQNSSSSTPPSIKPKHKIAKSRIRRKRIDLNCGCSFYQHIDCANH FT GFTHRGEHHCGSGREFRFYLGGTKSPLFHDNQCRRPNLHQHQDIPHPNTVQPQPQEGVE FT STQSIPQLPNLDDISSSFWDELLK" FT CDS complement(1426..2460) FT /transl_table=1 FT /gene="AC1" FT /product="replication protein" FT /db_xref="GOA:Q65CF4" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q65CF4" FT /protein_id="CAD48536.1" FT /translation="MPRNPNLFRLAAKNIFLTYPQCDIPKDEAIEMLQNLPWSVVKPTY FT IRVAREEHADGFPHLHCLIQLSGKSNIKDARFFDLTHPRRTANFHPNAQAAKDTNAVQN FT YITKEGDYCESGQYKVSGGTKSNKDDVYHNAVNAASAGEALNIIRAGDPKTFIVSYHNV FT KANIERLFQKAPDPWVPPFPLSSFTHVPDEMQEWADDYFGRDVAARPERPISIIIEGDS FT RTGKTMWARALGPHNYLSGHLDFNSRVYSNEAEYNVIDDVTPQYLKMKHWKELIGAQKD FT WQSNCKYGKPVQIKGGIPSIVLCNPGEGASYKAFLEKEENKALKDWTLHNAKFIFLNST FT LYQA" FT CDS complement(2016..2381) FT /transl_table=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="UniProtKB/TrEMBL:Q65CF3" FT /protein_id="CAD48537.1" FT /translation="MKLLKCFKICHGQSSNQRTYESPERNTQMDFRTSTVLFNSPESPT FT SRMLDFSTLLTPEGLPIFIQTHRQPKTPTPSRITSPKKVIIVNPDNTRYLGVQNQTKTT FT STTTPSMQLVLERLSTL" XX SQ Sequence 2593 BP; 641 A; 537 C; 619 G; 796 T; 0 other; accggatggc cgcgattttt tttggacctg gcccactaag ggaaatagcg ttgggccttc 60 ctggataaag ttaaccaatc attgcacgcg tatgtagtct aattattaac aacttggcga 120 ccaagttttt tcatggtcta taaatttgtc gttatgtgtg tggtccaacc acacaaatat 180 tgataatgcc taagcgtgat gccccatggc gcttaatgtc gggtacccct aaggtgagcc 240 gctcgtctaa ttatgttcct cctgatggat tgggccgtaa atttgataag tcttctgctt 300 gggccaacag gcccatgtac agaaagccca ggatatatcg gaccgtaagg tctgccgatg 360 ttccaagagg ctgtgaaggg ccatgcaaga ttcagtcgtt tgaacagcgt catgatatct 420 ctcatactgg gaaggtgatg tgcatctccg atgttactcg tggtaatggt attacccatc 480 gggttggtaa acgtttctgc gttaagtctg tgtacatatt agggaagatc tggatggacg 540 ataacatcaa gttgaagaac cacactaaca gcgttatgtt ttggctagtt agggatagga 600 ggcctaatgg aacggctatg gattttggtc acctctttaa catgttcgac aatgagccta 660 gtaccgccac tgtgaagaac gatctccgag atcgtttcca agtgatgcac aggtttcatg 720 cgaaggttac aggtggtcag tatgcaagca atgagcagac gttggtgaag cgtttttggc 780 gggtgaatca acgtgtaacg tataataatc aagaggcggc tcggtatgaa aaccatacgg 840 agaacgcctt aatgttgtac atggcatgta ctcatgcctc taaccctgta tatgctactc 900 ttaagatccg gatctatttt tatgattcgg tgttaaatta ataaattttg aattttattg 960 aataattctc aagtacatga tttacatatg atttatctgt tgcgaagcga acagctctga 1020 ttacattatt aatgcaaata acacctaacc tatctaaata caataagact aaatatttaa 1080 atctacttaa gtaattcgtc ccagaagctc gaactgatgt cgtccagatt tggtagttga 1140 ggtatgcttt gtgtagactc aactccttcc tgaggttgtg gttgaaccgt atttggatgt 1200 ggtatatcct ggtgttggtg taagttgggt cttctacact gattatcgtg aaataaaggg 1260 gatttggtac ctcccagata aaaacggaat tctctgcctg agccgcagtg atgctctccc 1320 ctgtgcgtga atccatggtt ggcgcagtcg atgtgctggt agaaggagca gccacagttt 1380 aggtctatcc tcttgcgacg aatcctggac tttgcaattt tgtgcttagg cttgatagag 1440 ggtggagttg aggaagatga attttgcatt gtggagtgtc caatctttta gtgctttgtt 1500 ttcctctttt tcgaggaaag ctttatagct ggccccttct cctggattgc aaagcacgat 1560 tgacggtatt ccccctttaa tttgaactgg cttcccgtat ttgcaatttg attgccagtc 1620 cttttgggcc ccaattagct ctttccaatg cttcatcttt aaatattgcg gagtgacatc 1680 atcaatgacg ttatactccg cttcatttga gtaaacccta gaattgaaat ctaggtgtcc 1740 actcaaatag ttatgtgggc ctaaggcacg cgcccacatt gtcttccctg tcctcgaatc 1800 accctcgatg attatactta taggtctctc cggccgcgca gcgacatccc taccaaaata 1860 atcatctgcc cattcttgca tctcgtccgg aacgtgcgtg aacgacgaga gtggaaacgg 1920 aggaacccat gggtccggag ccttctgaaa gagtcgctcg atgttagcct tcacattatg 1980 gtagcttaca atgaacgtct tggggtctcc ggcccttata atgttgagag cctctccagc 2040 actagctgca ttgacggcgt tgtggtagac gtcgtctttg tttgattttg tacccccaga 2100 taccttgtat tgtccggatt cacaataatc accttctttg gtgatgtaat tctggacggc 2160 gttggtgtct ttggctgcct gtgcgtttgg atgaaaattg gcagtccttc tggggtgagt 2220 aaggtcgaaa aatctagcat ccttgatgtt ggactttccg gagagttgaa taagacagtg 2280 gaggtgcgga aatccatctg cgtgttcctc tctggcgact cgtatgtacg ttggtttgac 2340 gactgaccat ggcagatttt gaagcatttc aatagcttca tctttgggga tatcacactg 2400 tggatatgtt aagaaaatat ttttggcagc tagacgaaat aaattagggt tccgtggcat 2460 ttttgtaaat atgagccagg acaccagggg gagctctctc taaaacttta ttttgctggt 2520 gtcctggtgt cccatttata ctaaaaccct cttggggaca ccaagggcaa tttcggccat 2580 ccgcaataat att 2593 //