ID AJ508783; SV 1; circular; genomic DNA; STD; VRL; 2562 BP. XX AC AJ508783; XX DT 24-SEP-2004 (Rel. 81, Created) DT 27-JUN-2005 (Rel. 84, Last updated, Version 2) XX DE Sinaloa tomato leaf curl virus BV1 gene for nuclear shuttle protein and BC1 DE gene for movement protein, isolate NI2 XX KW BC1 gene; BV1 gene; movement protein; nuclear shuttle protein. XX OS Tomato leaf curl Sinaloa virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2562 RA Kvarnheden A.; RT ; RL Submitted (24-SEP-2002) to the INSDC. RL Kvarnheden A., Dept of Plant Biology, Swedish Univ of Agricultural RL Sciences, P.O. Box 7080, SE-750 07 Uppsala, SWEDEN. XX RN [2] RX DOI; 10.1007/s00705-005-0509-x. RX PUBMED; 15789265. RA Rojas A., Kvarnheden A., Marcenaro D., Valkonen J.P.T.; RT "Sequence characterization of tomato leaf curl Sinaloa virus and tomato RT severe leaf curl virus: phylogeny of New World begomoviruses and detection RT of recombination"; RL Arch. Virol. 150(7):1281-1299(2005). XX DR MD5; f888171113c802ba80b09eeda90d0cb3. XX FH Key Location/Qualifiers FH FT source 1..2562 FT /organism="Tomato leaf curl Sinaloa virus" FT /host="Lycopersicon esculentum" FT /isolate="NI2" FT /mol_type="genomic DNA" FT /country="Nicaragua:Santa Lucia" FT /note="component B" FT /db_xref="taxon:71186" FT CDS 405..1175 FT /transl_table=1 FT /gene="BV1" FT /product="nuclear shuttle protein" FT /db_xref="GOA:Q65CG4" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:Q65CG4" FT /protein_id="CAD48526.1" FT /translation="MYYFRNKRGSSFIQRRYHSRNNVFKRNTSIKRDDGKRRHVYSNKS FT NDEPKMSSQRIHENQFGQEFVMVHNSAISTFVSYPSLGKTEPNRSRSYIKLKRLRFKGT FT VKIERVVSEMNMDGSTSKVEGVFSLVIVVDRKPHLGASGCLHTFDELFGARIHSHGNLS FT ITPSLKDRFYIRHVFKRVLSVEKDTTMVDVEGSTTLSNRRYSCWSTFKDLDHDSCNGVY FT GNISKNALLVYYCWMSDTMSKASTFVSFDLDYVG" FT CDS complement(1196..2077) FT /transl_table=1 FT /gene="BC1" FT /product="movement protein" FT /db_xref="GOA:Q65CG3" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:Q65CG3" FT /protein_id="CAD48527.1" FT /translation="MESQLAFPPNAFNYIESHRDEYQLSHDLTEIILQFPSTASQLTAR FT LSRSCMKIDHCVIEYRQQVPINATGSVVVEIHDKRMTDNESLQASWTFPIRCNIDLHYF FT SASFFSLKDPIPWKLYYRVCDTNVHQRTHFAKFKGKLKLSTAKHSVDIPFRAPTVKILS FT KQFNDKDVDFSHVDYGKWERKPIRCASMSRVGLRGPIEIRPGESWASRSTIGGGHSDAD FT SEIENELHPYRHISKLGTEVLDPGESASIVGAQRAESNITMSMGQLNELVRTTVQECIK FT SNCKAVQPKSLK" XX SQ Sequence 2562 BP; 678 A; 492 C; 565 G; 827 T; 0 other; acctgatggc cgcgcgattt ttcacccacc tatacgtggc gcgctcgctg cccttggatc 60 tctattggtg cttttctttt tggtgctttc tacgtggcgt cttgctattc gcgttttttg 120 ggtgttagtg gtcgataatg tcagtgctca gcctttgaac attcttttgt tcaaattaaa 180 gtgtattgct ttattgacgt catatatcat tacaacgacc acttatcctc tccgtcgacg 240 tggtcgaatt gagaccatgc tgttgagtca agttaggttg tagtttgagt catccttttc 300 tatatattgt gtctgtctgt tatattataa tcgatatgac tcaacagtca accacgttaa 360 aacgttagct tattatccct ataacgactt gtcaagtatt gattatgtat tattttagga 420 ataaacgtgg ttcatccttt attcaacggc ggtatcattc acgtaataat gtgtttaagc 480 gtaatacttc gatcaaacga gatgatggta aacgtcgtca tgtctattct aacaagtcca 540 atgatgagcc aaagatgtca tcgcaacgta ttcacgagaa ccagtttggt caagagtttg 600 tgatggtcca taattctgcc atatctacgt ttgtaagcta tcccagtctc ggtaagactg 660 aaccgaatcg tagcaggtcc tacattaagt tgaaacgact gcgttttaag ggtactgtga 720 agattgaacg tgttgtgtcg gaaatgaaca tggacggttc tacttcgaag gtagaaggag 780 tgttttcact tgtcatcgta gtggaccgta aaccccactt gggtgcatct ggttgtctac 840 atacctttga cgaactcttt ggagctagga ttcacagcca tggtaatctt agcataacac 900 cttctctcaa ggatcgcttc tatataagac atgtgttcaa acgtgttcta tctgtggaga 960 aggatacgac gatggtggat gtggaaggat ctaccacgct ttctaacagg cgatatagtt 1020 gttggtctac atttaaggat ttggatcacg actcgtgcaa tggtgtttat ggaaacatta 1080 gcaagaacgc tctcttagtt tactactgtt ggatgtcaga tactatgtct aaggcatcta 1140 cttttgtatc gtttgacctt gattatgtcg gatgaataat gaaaactaat aaattttatt 1200 tcaatgattt cggctgaaca gccttacagt tacttttaat acattcttgt acagtagtcc 1260 taactaattc gtttaactgc cccattgaca tagttatatt ggattccgct ctttgggctc 1320 ctactataga agcagattct cctggatcta ggacttctgt tccgagctta cttatgtgtc 1380 tatacggatg gagctcgttc tctatctcgg agtccgcatc tgaatggccg cctcctattg 1440 tacttctaga agcccatgac tctccaggcc ttatttcaat tgggcctcta agcccaactc 1500 tggacatgga cgcacatcta atgggcttcc tctcccattt accgtagtcg acgtgcgaga 1560 aatccacatc cttgtcattg aactgtttgg acaggatttt taccgtgggt gcccggaaag 1620 ggatgtccac cgagtgtttc gccgtcgaca gcttcagctt ccctttgaat ttcgcgaagt 1680 gggtcctttg atgaacattt gtatcgcaaa ctctgtaata gagtttccat ggaattgggt 1740 ctttcaacga gaagaacgaa gcggaaaagt agtggagatc tatgttgcat cttatcggaa 1800 aagtccatga tgcctgtaga gattcgttgt ctgtcattct tttgtcgtgg atctccacta 1860 ccaccgaccc agttgcgtta atcgggactt gttgtctgta ttctatgacg cagtggtcta 1920 ttttcatgca gctccgactt agtctagccg tcaactgtga cgccgtcgac ggaaattgca 1980 gaattatctc agttaaatca tgggaaagct gatattcgtc ccgatgagac tctatataat 2040 tgaaggcatt aggaggaaat gctaattgag attccattag agaaagaatg gccgcgcagc 2100 ggaagcaatt actgaagttg aactggtgaa gatgaaatta gggagcaata actaaagttg 2160 aactggtgaa gatgaaatta tgtttaattt gggaatcatt cgctgaagaa cagttgaaga 2220 ggacgaatgt tttgtgggtc cacaaaagta atttgaaact gaaatcagtt ttacaaactc 2280 acttggttga acgaattgtt tctgagaaat atgagcaaaa tgttaaataa ttggactatg 2340 tgtaattctt aaatctgata gtctttatat agaaacagca taccctggtt tgagagcttt 2400 caagagaaga taaatgttaa ccgatggcat ttttgtaata agaagggtgt actccgattg 2460 agctctcaaa cttctgtcta tgtaattggg gtaatggtgt acaatatata ctagaactct 2520 ctatagagtt ttgggacacg tggcggccat cagtataata tt 2562 //