Dbfetch
ID AJ508781; SV 1; linear; genomic DNA; STD; VRL; 1134 BP. XX AC AJ508781; XX DT 24-SEP-2004 (Rel. 81, Created) DT 27-JUN-2005 (Rel. 84, Last updated, Version 2) XX DE Sinaloa tomato leaf curl virus AV1 gene, AC3 gene (partial) and AC2 gene DE (partial), isolate NI3 XX KW AC2 gene; AC3 gene; AV1 gene; coat protein; replication enhancer; KW transcriptional activator. XX OS Tomato leaf curl Sinaloa virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-1134 RA Kvarnheden A.; RT ; RL Submitted (24-SEP-2002) to the INSDC. RL Kvarnheden A., Dept of Plant Biology, Swedish Univ of Agricultural RL Sciences, P.O. Box 7080, SE-750 07 Uppsala, SWEDEN. XX RN [2] RX DOI; 10.1007/s00705-005-0509-x. RX PUBMED; 15789265. RA Rojas A., Kvarnheden A., Marcenaro D., Valkonen J.P.T.; RT "Sequence characterization of tomato leaf curl Sinaloa virus and tomato RT severe leaf curl virus: phylogeny of New World begomoviruses and detection RT of recombination"; RL Arch. Virol. 150(7):1281-1299(2005). XX DR MD5; ce73b3b2c4138b2731cbe2fc6b53e482. XX FH Key Location/Qualifiers FH FT source 1..1134 FT /organism="Tomato leaf curl Sinaloa virus" FT /host="Lycopersicon esculentum" FT /isolate="NI3" FT /mol_type="genomic DNA" FT /country="Nicaragua:Sebaco" FT /note="component A" FT /db_xref="taxon:71186" FT CDS 200..955 FT /transl_table=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:Q65CG9" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q65CG9" FT /protein_id="CAD48521.1" FT /translation="MPKRDAPWRSFAATSKVSRNANYSPRAGMGPKVDKATAWVNRPMY FT RKPRIYRVMRGPDVPKGCEGPCKVQSYEQRHDISHVGKVMCISDVTRGNGLTHRVGKRF FT CVKSVYILGKVWMDDNIKLKNHTNSVMFWLVRDRRPYGIPMDFGQVFNMFDNEPSTATI FT KNDLRDRFQVMHGFYAKVTGGQYASNEQAIVRRFWKVNNHVVYNHQEAGKYDNHTENAL FT LLYMACTHASNPVYATLKIRIYFYDSIAN" FT CDS complement(952..>1134) FT /codon_start=1 FT /transl_table=1 FT /gene="AC3" FT /product="replication enhancer" FT /db_xref="GOA:Q65CG8" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q65CG8" FT /protein_id="CAD48522.1" FT /translation="TLITASGSNYLARFRHLVNMYLDQLGVISINNVIRAVRFATDRSY FT VNYVLEDHSIKIKLY" FT CDS complement(1097..>1134) FT /codon_start=3 FT /transl_table=1 FT /gene="AC2" FT /product="transcriptional activator" FT /db_xref="UniProtKB/TrEMBL:Q65CG7" FT /protein_id="CAD48523.1" FT /translation="IDNSFWVELFS" XX SQ Sequence 1134 BP; 312 A; 236 C; 259 G; 327 T; 0 other; tattacctga tggccgcgcg atttcccccc ccctacacgc gcgtacgctc ctctttaatt 60 tgaattaaag tgtattagtg cgctgtcgtc caatcatatt gcgtctgacg agtctagata 120 tttgcaacaa ctttgggccc aagttgttga gtgtctgcta taaattaaag aggctttggc 180 ccactgactt taactcaaaa tgcctaagcg tgatgcccca tggcgctcgt tcgcggcaac 240 ttccaaggtt agtcgcaatg ctaattattc tccacgggct ggtatggggc caaaggtcga 300 caaggccact gcttgggtga ataggcccat gtatagaaag cccaggatct accgggttat 360 gagaggccca gatgttccaa aaggatgtga aggcccatgt aaggtccagt catacgagca 420 gcgccacgat atttcacatg ttgggaaggt catgtgtatc tccgacgtga cacgtggtaa 480 tggtctcacc caccgtgtgg ggaagcgttt ttgtgttaag tccgtgtata ttctcggcaa 540 ggtttggatg gatgataaca tcaagttgaa gaaccacacg aacagtgtta tgttttggct 600 ggtcagggac cgtaggcctt atggtattcc tatggatttc ggacaagtgt ttaacatgtt 660 cgataacgaa cccagtaccg cgacgatcaa gaacgatctt agagatcggt ttcaggtcat 720 gcacgggttt tatgctaagg ttacaggtgg acagtatgct agcaacgagc aagctatagt 780 gaggcgtttt tggaaggtca acaatcatgt ggtctacaat catcaagagg caggaaaata 840 tgacaaccat actgagaacg ccctgttatt gtatatggca tgtactcatg cttctaaccc 900 cgtgtatgca acattgaaaa ttcggatcta tttttatgat tcgattgcta attaataaag 960 ttttattttt attgaatgat cttcaagtac ataatttaca tatgatctgt ctgttgcaaa 1020 acgaacagct ctgattacat tgtttatcga aatcacacct aactgatcta aatacatatt 1080 aactaaatgt ctaaacctag ctaaataatt cgacccagaa gctgttatca atgt 1134 //