ID AJ508757; SV 2; linear; genomic RNA; STD; VRL; 3892 BP. XX AC AJ508757; XX DT 04-DEC-2002 (Rel. 74, Created) DT 24-MAY-2004 (Rel. 79, Last updated, Version 5) XX DE Potato yellow vein virus ORF4, ORF26 and cpm gene for coat protein minor, DE genomic RNA 3 XX KW coat protein minor; cpm gene; ORF26; ORF4. XX OS Potato yellow vein virus OC Viruses; Riboviria; Closteroviridae; Crinivirus. XX RN [1] RC revised by [3] RA Coutts R.H.A.; RT ; RL Submitted (24-SEP-2002) to the INSDC. RL Coutts R.H.A., Biological Sciences, Imperial College London, Sir Alexander RL Fleming Building, Imperial College Road, London, SW7 2AZ, UNITED KINGDOM. XX RN [2] RX DOI; 10.1023/A:1020988327197. RX PUBMED; 12881642. RA Livieratos I.E., Muller G., Salazar L.F., Eliasco E., Coutts R.H.A.; RT "Identification and sequence analysis of Potato yellow vein virus capsid RT protein minor gene"; RL Virus Genes 25(3):317-322(2002). XX RN [3] RP 1-3892 RA Coutts R.H.A.; RT ; RL Submitted (21-APR-2003) to the INSDC. RL Coutts R.H.A., Biological Sciences, Imperial College London, Sir Alexander RL Fleming Building, Imperial College Road, London, SW7 2AZ, UNITED KINGDOM. XX RN [4] RX DOI; 10.1099/vir.0.79910-0. RX PUBMED; 15218192. RA Livieratos I.C., Eliasco E., Muller G., Olsthoorn R.C.L., Salazar L.F., RA Pleij C.W.A., Coutts R.H.A.; RT "Analysis of the RNA of Potato yellow vein virus: evidence for a tripartite RT genome and conserved 3'-terminal structures among members of the genus RT Crinivirus"; RL J. Gen. Virol. 85(Pt 7):2065-2075(2004). XX DR MD5; d171cc864f8af416fcf3bddc975a1d11. DR EuropePMC; PMC2786829; 19793810. DR RFAM; RF01078; PK-PYVV. XX FH Key Location/Qualifiers FH FT source 1..3892 FT /organism="Potato yellow vein virus" FT /segment="3" FT /host="Solanum tuberosum subsp. andigena" FT /mol_type="genomic RNA" FT /country="Peru:Cajamarca" FT /db_xref="taxon:103881" FT 5'UTR 1..626 FT CDS 627..734 FT /product="hypothetical protein" FT /note="ORF4" FT /db_xref="UniProtKB/TrEMBL:Q80B15" FT /protein_id="CAD89761.1" FT /translation="MCSEKREHDFISQTVSSLHQAACSRLKVMRSEKII" FT CDS 916..2940 FT /gene="cpm" FT /product="coat protein minor" FT /db_xref="GOA:Q8B3A1" FT /db_xref="InterPro:IPR002679" FT /db_xref="UniProtKB/TrEMBL:Q8B3A1" FT /citation=[2] FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAD48512.1" FT /translation="MDKSVLDELIFEDGDSQENSEISLRNLKHLIVQSYLFDLTKCKTI FT SFTYPYSKLLFDSRAILPLKFKLNQGYILYQFNPSNATGHSFKQLDTSWFSNAFLTLAK FT PRALRYQQDNEFSVEMDGGNCTLGILGWKCYKIFSSFQPTSVEVRLILPCSEFDQSSQS FT SLQALKIPPSVFMNNVLVDRISNPLSLYQYVILDQNSKIVSKLAVYGDADLSKGLSCTS FT LQIRPIQQKDAELPDISSSENVEFDESNDFRLYKTYELKSAFSKSLVFLCKVFCLNVDH FT INSHVQIWYGDEKRKLEPLVRMTGSNKELTFQLFYMKDGRGRYIDDFQKSIPISVDKEG FT YAEVRLGILTNGKDSFHVVVNDLKIGPISFNLRGGNISFGSEWLIKKKDLGTLDPSSRR FT RITDIFKYVRCFVDGDEKKLDISKTAENHYQGNASAISNIGDLSVFRIKHVTDIFKPKE FT KEQPEKPVIIPEKQPTIQPEGEKEVVKVQTDQNVDRRNKNLVVINSGDFSKQEVEKIKS FT ELEKFYMKQKVLREDVDDLVLPLGVSFCTSKNSMSDPHSYVVWRCEDGKNRRFYKNRHS FT KFLNMTFGESPRNVERIYLRSRSAEILEKLRNRVLIWPKTHANKRGLLPEYAYLACDFF FT KFEDVALSDSERLALNSPNTVISLKNKYRRNIVNVNQNF" FT CDS 2967..3659 FT /product="hypothetical protein" FT /note="ORF26" FT /db_xref="UniProtKB/TrEMBL:Q80B14" FT /protein_id="CAD89762.1" FT /translation="MENPELISYPSNGNTQFASDEFIAYQINAVVNALQKYALYSADEL FT SAFRDHCGVILNLISRHGESVNMFSRNSKIFESLTNNSVPEETILRNKGIYFPTLSVYE FT LQDILNNFVVTLNFLIDVKTGIVTEVILSSCIDEFNVKNFRGLKNILRAKLTTKYPLTR FT FVSLEMAFDDNGKQDIARFLKNMRTDDVDPKKVLRKIVQDLNLAFMFELSFHYLNDGLI FT IFKINNKH" FT 3'UTR 3660..3892 XX SQ Sequence 3892 BP; 1372 A; 631 C; 736 G; 1153 T; 0 other; cgaaatttaa cagtttccca gaggttaagc tgtatgagct gtcacctttt gaaagttact 60 tggtagtcaa cacatgcctg ccgccgccag tcggtttcag gaagtgtaga tttgcccaaa 120 acacaacacc acaccaaacc aaacaactcc agccagtatc ctaaaataaa aagaactaat 180 aaatagctgc ttaacagtcg ttatttaata gctcgcactc cggagttaca aacaaccact 240 ttggcacagt gggcaacaca ccactcacgg ttctacaatc gtgaacatta tccccgcata 300 aacccaaaaa gtaaaaaata ataaatacaa aaagaaaaga aaaaattttt gtcaatttta 360 attaaaaata aataaaattt gtttacttat aaaaagaaaa agaaaaagaa aaaaattttt 420 gtcaagtttt attaaaaaga aagagaaaat ttaaaattta gttagaaaat tttatagtga 480 ttgtattttt gttctgaact tctaaaacaa gaataaaatc ttgaaaacac aaggaatcaa 540 ctgtgataaa caggaagatc ctattgtgat tttctcacaa aaatataata taggaaatag 600 ttgtataaaa gaacatattc tgatagatgt gttcggaaaa gagagaacat gacttcatct 660 ctcaaacggt aagcagttta caccaagctg cgtgttcgcg tttgaaagtc atgcgatctg 720 aaaaaataat ttaaatagta gtattgttaa attctgcttt actctattag ttttgattta 780 gttgcaaata atctcgaaaa cgtaacagta atcactaagt tcacgtgcat tttcgtagaa 840 ctatctttta gtttttctta ttatatcaag tataaagaaa aataaaataa aaataaaaca 900 aaataaaaaa taaaaatgga taagtctgtt ttagatgagc taatatttga agatggtgat 960 tcccaggaaa attctgaaat ttcactgagg aacctgaaac acctcattgt tcaaagctat 1020 ctctttgatc ttacgaaatg taagaccata tctttcactt atccatacag caagctactc 1080 tttgattcaa gagctattct gcctcttaaa ttcaaattga atcaagggta cattttatat 1140 cagttcaatc catccaatgc taccggtcat tcattcaaac agctggacac ctcatggttt 1200 tcaaatgcat ttttaacact tgcaaaaccg agagctctta ggtatcagca ggataatgaa 1260 ttttcagtag agatggatgg ggggaattgt acacttggca tacttgggtg gaaatgttac 1320 aaaatcttct cttcatttca accaacttct gttgaagtga gactgatttt accttgctct 1380 gaatttgatc aaagctccca aagtagctta caggcattaa aaattcctcc gagtgtattc 1440 atgaataatg tcttagttga tagaatctcc aaccctctga gcttgtatca atatgtcata 1500 ttggatcaga attcaaagat tgttagtaag ctggcagttt atggagatgc agatctaagt 1560 aaaggtctca gttgtacatc tctccagatc aggccaatcc aacaaaaaga tgcagaacta 1620 cctgatattt caagctcaga gaatgttgaa tttgatgaga gtaatgattt tcgtctttac 1680 aaaacatacg aattgaagtc agccttttcc aagtcgctgg tatttctgtg taaagtgttt 1740 tgtttaaatg tagatcacat aaactcacat gttcagatat ggtatggaga tgaaaagaga 1800 aaactagaac cattggtgag gatgactggt tctaataagg aattaacatt ccaacttttc 1860 tatatgaagg atggtagagg tcgatacatt gacgattttc agaaatcgat acctatctcg 1920 gtagataaag aaggatatgc cgaagtgaga ttgggaatcc tgacgaacgg aaaagattcc 1980 tttcatgtag tagttaacga ccttaagatc ggacccattt cattcaactt gagaggcggc 2040 aatatatctt ttgggtctga gtggctaata aagaagaaag atcttggaac tcttgaccca 2100 tccagcagga ggagaatcac agacatcttt aaatatgtca gatgctttgt cgatggggat 2160 gagaagaagc tcgacatttc aaaaacggct gagaatcatt atcagggtaa tgcttcagcc 2220 atatccaata ttggcgattt gtcagtattc aggatcaaac atgtcaccga tatttttaag 2280 ccgaaagaaa aagaacaacc agagaaaccg gtgatcattc ctgagaaaca acccacaatt 2340 caaccggaag gagaaaagga ggttgtaaaa gttcaaactg accaaaatgt ggacaggagg 2400 aacaaaaatc ttgttgttat aaattcaggg gatttttcaa aacaagaggt tgaaaagatc 2460 aagtccgaac tggagaagtt ctacatgaag cagaaagtct taagagaaga tgtagatgac 2520 ctggttctcc cacttggggt ttccttctgc acatcaaaga attcgatgtc tgacccgcac 2580 tcatatgttg tttggaggtg cgaagatggt aagaatagaa gattctataa gaatagacat 2640 tcgaaattct taaatatgac ttttggtgaa agtccgagaa atgtcgagcg tatatatctg 2700 agatctagaa gtgctgagat tttagaaaaa ttacgcaacc gagtgttaat atggccgaag 2760 acacatgcca acaagagagg attactgcct gagtacgctt acttagcctg cgacttcttc 2820 aaatttgaag acgttgccct gtctgacagc gaaagattgg cattgaacag tccgaacacg 2880 gttattagtc tcaagaacaa ataccgacgt aatattgtga atgtgaatca aaacttttga 2940 gatattgcgt ctcaatcttg aggacaatgg agaatccgga gttgatttca tatccgagta 3000 atggaaatac tcaattcgcc tctgacgaat tcatagctta tcagataaac gcggttgtga 3060 acgcgttaca aaaatacgct ctttattctg ctgatgagtt gagcgctttt cgagatcatt 3120 gtggtgtgat cttgaatctt atttctagac atggtgagag tgtgaacatg ttcagtagaa 3180 atagtaaaat cttcgaaagt ctgacaaata attcagtccc agaagaaaca atactcagaa 3240 acaaaggaat ttattttccc acgttgtctg tgtatgaact acaagatata ctcaataatt 3300 ttgtagtaac tttgaacttt ttgattgacg tgaaaacagg tattgtgacc gaggtcatcc 3360 tgtcgtcatg tatcgatgag ttcaatgtaa agaatttcag aggtttgaaa aacatattaa 3420 gggcaaagtt gactaccaag tatccactga cgaggttcgt ctctctagag atggcctttg 3480 acgacaatgg aaaacaagat atagcaagat ttttaaagaa tatgagaaca gatgatgtcg 3540 atccaaagaa agtattgcga aaaatagttc aagacttgaa tttagcgttc atgtttgaat 3600 taagtttcca ctatttgaat gatgggttga tcatttttaa aataaacaat aaacattaga 3660 ttgttatgat gttattatag tagatcataa tataatttta atttctatac gggtaatttt 3720 gcttaaaatt tatttacccg aggtctagta cgagtgatat actcagtgta ttagttaaat 3780 cctaaaacta tatatgtatt ttatgtatta cttagttaag tgttaataaa attcggtaga 3840 aaagatggtt tgaaaaccac gccttctacc aatatagtaa ataaataggc gg 3892 //