ID AJ496287; SV 1; circular; genomic DNA; STD; VRL; 2750 BP. XX AC AJ496287; XX DT 22-JUL-2002 (Rel. 72, Created) DT 15-APR-2005 (Rel. 83, Last updated, Version 4) XX DE Cotton leaf curl Multan virus-[Faisalabad2] complete sequence, isolate 31cf XX KW AC1 gene; AC2 gene; AC3 gene; AC4 gene; AV2 gene; coat protein; KW complete genome; precoat protein; Rep protein; KW replication enhancer protein; transcriptional activator protein; KW transcriptional regulator protein. XX OS Cotton leaf curl Multan virus-[Faisalabad2] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2750 RA Fauquet C.M.; RT ; RL Submitted (20-JUL-2002) to the INSDC. RL Fauquet C.M., Iltab, Danforth Plant Science Center, 975 North Warson Road, RL St Louis, Missouri, MO 63132, USA. XX RN [2] RX DOI; 10.1007/s00705-003-0149-y. RX PUBMED; 14551819. RA Mansoor S., Briddon R., Bull S., Bedford I.D., Bashir A., Hussain M., RA Saeed Z.M.Y., Malik K.A., Fauquet C., Markham P.G.; RT "Cotton leaf curl disease is associated with multiple monopartite RT begomoviruses supported by single DNA beta"; RL Arch. Virol. 148(10):1969-1986(2003). XX DR MD5; f068c152e584a1945417a89c8abcaef2. DR EuropePMC; PMC3315792; 21410988. DR EuropePMC; PMC5727119; 29234082. DR EuropePMC; PMC6451280; 30954067. XX FH Key Location/Qualifiers FH FT source 1..2750 FT /organism="Cotton leaf curl Multan virus-[Faisalabad2]" FT /host="Gossypium hirsutum" FT /isolate="31cf" FT /mol_type="genomic DNA" FT /country="Pakistan" FT /db_xref="taxon:223255" FT CDS 117..428 FT /gene="AV2" FT /product="precoat protein" FT /db_xref="GOA:Q8JJE7" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q8JJE7" FT /protein_id="CAD42826.1" FT /translation="MWDPLLNEFPDTVHGFRCMLSVKYLQLLSQDYSPDTLGYELIRDL FT ICILRSRNYVEASCRYRHFYARVESTPASELRQPIHQPCCCPHCPRHKTTGMDKQAHV" FT CDS 277..1047 FT /gene="AV2" FT /product="coat protein" FT /db_xref="GOA:Q8JLK9" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q8JLK9" FT /protein_id="CAD42827.1" FT /translation="MSKRAADIVISTPASKVRRRLNFGSPYTSRAAAPIVRVTKQQAWT FT NRPMYRKPRMYRMYRGPDVPKGCEGPCKEQSLESRHDVVHIGKVMCISDVTRGVGWTHR FT IGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDKQP FT STATVKNSHRDRYQVLRKWHATVTGGQYASKEQALVKKFVRVNNYVVYNQQEAGKYENH FT TENALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT CDS complement(1050..1454) FT /gene="AC3" FT /product="replication enhancer protein" FT /db_xref="GOA:Q8JLK8" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q8JLK8" FT /protein_id="CAD42828.1" FT /translation="MDSRTGEPITAAQAGNGAYIWEVPNPLYFKIISHVNRPFTTNMDI FT LTIRIQFNYNTRKAMGLHKCFLTFGIWTTLQPQTGLFLRVFKTQVFKYLNNLGVISINL FT VIKAVEHVLYNVIQQTMYVDQYSEIKFKLY" FT CDS complement(1147..1599) FT /gene="AC2" FT /product="transcriptional activator protein" FT /db_xref="GOA:Q8JLK7" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q8JLK7" FT /protein_id="CAD42829.1" FT /translation="MRSSSLSKDPCTQVPIKVQHREAKRRNRRRRVDLECGCSYYLSIN FT CHNHGFTHRGTHHCSSSREWRIYLGGSKSPLFQDHQPRQPSIHDEYGYTHDQDPVQLQH FT SESYGTAQVFSNLRNLDDLTASDWSFLKGIQNPSLQISEQSRCNFN" FT CDS complement(1496..2587) FT /gene="AC1" FT /product="Rep protein" FT /db_xref="GOA:Q8JLK6" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q8JLK6" FT /protein_id="CAD42830.1" FT /translation="MAPPKRFKVQAKNYFITYPQCSLTKEEALSQIQAINTPSNKKYIK FT ICRELHEDGSPHLHVLIQFEGKFVCTNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKAYI FT DKDGDTLEWGEFQIDGRSARGGQQTANDAYAAALNAGSKSEALRVIKELAPKDFVLQFH FT NLNANLDRIFQEPPAPYISPFSPSSFDQVPEELEVWAIDNVVDPAARPLRPRSIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHFLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEEKNTALKNWAVKNAIFITLEGPL FT YSGTNQSTAQGSEETQQEEESRS" FT CDS complement(2128..2430) FT /gene="AC4" FT /product="transcriptional regulator protein" FT /db_xref="GOA:Q8JLK5" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q8JLK5" FT /protein_id="CAD42831.1" FT /translation="MGALISMCSSSSRVNSYARITDSSTWYPQPDQHISIRTFRELNQA FT QMSRPTSTRTGTLSSGESFRSMEDQQEEDSRQPTTLTPQHLTQEVSQRLLESLRN" XX SQ Sequence 2750 BP; 699 A; 550 C; 652 G; 849 T; 0 other; accggatggc cgcgcgattt tttatgtggg cccccgagtt atgagattgc tccctcaaag 60 ctaaataacg ctcccgccca ctataagtac ttgcgcacta agtttcaaat tcaaacatgt 120 gggatccatt gttaaacgaa tttcctgata cggtgcacgg gtttcggtgt atgctttctg 180 tgaaatatct gcaactttta tcgcaggatt attcaccgga taccctaggt tacgagttaa 240 tacgggattt aatctgtatt ctacgttccc gtaattatgt cgaagcgagc tgcagatatc 300 gtcatttcta cgcccgcgtc gaaagtacgc cggcgtctga acttcggcag cccatacacc 360 agccgtgctg ctgcccccat tgtccgcgtc acaaaacaac aggcatggac aaacaggccc 420 atgtatagga agcccagaat gtatcggatg tacagaggtc cggatgttcc aaagggttgt 480 gaaggcccat gtaaggaaca atctttggag tccagacatg atgttgttca tattggtaag 540 gtaatgtgta tttctgatgt tactcgtggt gtcggttgga cccatcgtat tggtaaacgt 600 ttttgtgtca agtcagttta tgttttaggt aagatatgga tggatgaaaa tattaagacc 660 aagaatcata cgaattcggt gatgttcttt ttagtccgcg atcgacgtcc tgttgacaaa 720 cctcaggatt ttggtgaggt attcaatatg tttgacaagc aacccagtac agcaactgtg 780 aagaatagtc atagggaccg ttaccaggtg ttgaggaaat ggcatgcaac cgttacgggt 840 ggtcaatatg catcgaagga acaagctttg gtcaagaagt ttgtcagagt taacaattat 900 gttgtttaca atcaacagga agcagggaaa tacgagaatc atacggaaaa tgcgttaatg 960 ctttatatgg cttgtactca cgctagcaac cctgtttatg ctacgttgaa gattaggata 1020 tatttttatg actctgtaac gaattgatat taataaagtt tgaattttat ttctgaatat 1080 tgatctacat acatagtttg ttggattaca ttgtacaata catgttctac agctttaata 1140 actaaattaa ttgaaattac accgagattg ttcagatatt tgaagacttg ggttttgaat 1200 acccttaaga aaagaccagt ctgaggctgt aaggtcgtcc agattccgaa ggttagaaaa 1260 cacttgtgca gtcccatagc tttccgagtg ttgtagttga actggatcct gatcgtgagt 1320 atatccatat tcgtcgtgaa tggacggttg acgtggctga tgatcttgaa atagagggga 1380 tttggaacct cccagatata tgcgccattc cctgcttgag ctgcagtgat gggttcccct 1440 gtgcgtgaat ccatggttgt ggcagttgat tgacagataa taagaacacc cgcattcaag 1500 atctactctc ctcctcctgt tgcgtctctt cgcttccctg tgctgtactt tgattggtac 1560 ctgagtacag gggtccttcg agagtgatga agatcgcatt cttcactgcc cagtttttta 1620 gtgcggtgtt cttttcctcg tctaggaatt ctttataact gctgttggga ccaggattgc 1680 agaggaagat tgttggtatc ccgcctttaa tttgaactgg cttcccgtac tttgtgttgg 1740 attgccagtc cctttgggcc cccatgaact ctttaaagtg tttgaggaaa tgcgggtcga 1800 cgtcatcaat gacgttatac caggcgtcgt tactgtagac cttgggactc agatccagat 1860 gtccgcacaa atagttatgt ggtcccagtg atctagccca catcgtcttt cccgttcgac 1920 tatctccttc aattactata cttcgaggtc taaggggccg cgcagcggga tcgacaacgt 1980 tatcgatggc ccaaacttca agttcttctg gaacttgatc gaaagaagaa ggagaaaaag 2040 gagaaatata gggagccggt ggctcctgaa agattctgtc tagatttgca tttaaattat 2100 gaaattgtag tacaaaatct ttaggagcta gttccttaat gactctaaga gcctctgact 2160 tacttcctgc gttaagtgct gcggcgtaag cgtcgttggc tgtctgctgt cctcctcttg 2220 ctgatcttcc atcgatctga aactctcccc actcgagagt gtccccgtcc ttgtcgatgt 2280 aggccttgac atctgagctt gatttagctc cctgaatgtt cggatggaaa tgtgctgatc 2340 tggttgggga taccaggtcg aagaatctgt tattcgtgca tacgaattta ccctcgaact 2400 ggatgagcac atggagatga gggctcccat cttcgtgtaa ctctctgcag attttgatgt 2460 attttttatt cgagggtgtg ttgatggctt gaatttggga aagtgcttcc tctttagtga 2520 gtgagcactg tggataagtg atgaaataat ttttggcttg tactttaaaa cgtttggggg 2580 gagccattga ctttggtcaa ttggagacaa ctgatgggct tttactctgg gaattggaga 2640 ctggatacaa tttatagtgt ctccaaatgg catattctgt aaataactag aagttcgttt 2700 gaaatttaaa ttcccctttg gactccaaaa gcggccatcc gtttaatatt 2750 //