ID AJ496286; SV 1; circular; genomic DNA; STD; VRL; 2750 BP. XX AC AJ496286; XX DT 22-JUL-2002 (Rel. 72, Created) DT 17-MAY-2004 (Rel. 79, Last updated, Version 3) XX DE Cotton leaf curl Kokhran virus-[Faisalabad1] complete genome, isolate DE Faisalabad x2f XX KW AC1 gene; AC2 gene; AC3 gene; AC4 gene; AV1 gene; AV2 gene; coat protein; KW complete genome; procoat protein; Rep protein; KW replication enhancer protein; transcriptional activator protein; KW transcriptional regulator protein. XX OS Cotton leaf curl Kokhran virus-[Faisalabad1] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2750 RA Fauquet C.M.; RT ; RL Submitted (19-JUL-2002) to the INSDC. RL Fauquet C.M., Iltab, Danforth Plant Science Center, 975 North Warson Road, RL St Louis, Missouri, MO 63132, USA. XX RN [2] RX DOI; 10.1007/s00705-003-0149-y. RX PUBMED; 14551819. RA Mansoor S., Briddon R., Bull S., Bedford I.D., Bashir A., Hussain M., RA Saeed Z.M.Y., Malik K.A., Fauquet C., Markham P.G.; RT "Cotton leaf curl disease is associated with multiple monopartite RT begomoviruses supported by single DNA beta"; RL Arch. Virol. 148(10):1969-1986(2003). XX DR MD5; 662f0db1e954a37b22d2bd96e14cbc4d. DR EuropePMC; PMC4690014; 26512705. XX FH Key Location/Qualifiers FH FT source 1..2750 FT /organism="Cotton leaf curl Kokhran virus-[Faisalabad1]" FT /host="Gossypium hirsutum" FT /isolate="Faisalabad x2f" FT /mol_type="genomic DNA" FT /country="Pakistan:Faisalabad" FT /db_xref="taxon:222466" FT CDS 132..488 FT /gene="AV2" FT /product="procoat protein" FT /db_xref="GOA:Q8JLL2" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q8JLL2" FT /protein_id="CAD42820.1" FT /translation="MWDPLLNEFPDTVHGFRCMLAVKYLQLVQKTYSPDTLGYDLIRDL FT ILVIRARNYVEATSRYNHFHARFEGTPPSQLRQPICEPCCCPHCPRHQSKSMGEQAHEQ FT KAQDVQDVQKSRCS" FT CDS 292..1062 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:Q777H9" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q777H9" FT /protein_id="CAD42821.1" FT /translation="MSKRPADIIISTPASKVRRRLNFDSPYVSRAAAPIVRVTKAKAWA FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDIQHIGKVMCVSDVTRGTGLTHR FT VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEP FT STATVKNVHRDRYQVLRKWYATVTGGQYASKEQALVKKFIRVNNYVVYNQQEAGKYENH FT SENALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT CDS complement(1059..1463) FT /gene="AC3" FT /product="replication enhancer protein" FT /db_xref="GOA:Q8JLL1" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q8JLL1" FT /protein_id="CAD42822.1" FT /translation="MDSRTGELITAAQAENGVFIWEIQNPLYFKITEHHNRAFLMNRDI FT ITVQIQFNHNLRKALGIHKCFIAFRIWMTSQPPTGRFLRVFRTQVLKYLNNLGIVSINN FT VVRAVDHVLWNVLQHVVFVDQSSSIKFNIY" FT CDS complement(1204..1608) FT /gene="AC2" FT /product="transcriptional activator protein" FT /db_xref="GOA:Q8JLL0" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q8JLL0" FT /protein_id="CAD42823.1" FT /translation="MQSSSPSRAHSTQVPIKVQHRLAKKGTRRRRVDLPCGCSYFIALA FT CHNHGFTHRGTHHCSSSREWRVYLGDSKSPVFQDNRAPQSSIPNEQRHHHRPDTVQSQP FT EESVGDTQMFHSFPNLDDLTASDWSFLKGL" FT CDS complement(1511..2593) FT /gene="AC1" FT /product="Rep protein" FT /db_xref="GOA:Q777H8" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q777H8" FT /protein_id="CAD42824.1" FT /translation="MPPKRNGIYSKNYFITYPKCSLTKEEALSQLLNIQTPTSKKYIRI FT CRELHEDGTPHLHVLIQFEGKFKCQNMRFFDLVSPSRSAHFHPNIQGAKSSSDVKSYIE FT KDGDILDWGQFQIDGRSARGGQQTANDAYAAALNAGSKSEALRVIKELAPKDFVLQFHN FT LNANLDRIFQEPPAPYVSPFSSSSFDQVPEELEVWAAENVVSAAARANRPISVVIEGDS FT RTGKTMWARSLGPHNYLCGHLDLSPRVYSNDAWFNVIDDVDPHYLKHFKEFMGAQKDWQ FT SNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEEKNSALKNWALKNAIFITLESPLY FT SGSNQSAAQASQEGDQTSES" FT CDS complement(2137..2439) FT /gene="AC4" FT /product="transcriptional regulator protein" FT /db_xref="GOA:Q777H7" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q777H7" FT /protein_id="CAD42825.1" FT /translation="MGLLTCMFSSSSKGNSSARICDSSTWSPQAGQHISIRTYRELNPA FT PTSNPTSRRTGTFSTGGNFRSTEGQQEEGNRQPMTLTPQHLTREVSRRLLESLRN" XX SQ Sequence 2750 BP; 743 A; 556 C; 626 G; 825 T; 0 other; accggatggc cgcgcgattt ttttgtgggc cctaccatta actcttgtcg gccaatcata 60 tgacgcgctc aaagcttaaa taattctccc gcttattata agtacttcgt tgctaagtat 120 gcgtttgaaa aatgtgggat ccactgttaa atgagttccc cgacaccgtt cacggtttta 180 ggtgtatgtt agcagttaaa tatttgcagt tagtacagaa aacttactct cctgatacat 240 tgggttacga tttgataagg gatttaatcc tggtaataag ggctaggaat tatgtcgaag 300 cgaccagcag atataatcat ttccacgccc gcttcgaagg tacgccgccg tctcaacttc 360 gacagcccat atgtgagccg tgctgctgcc cccattgtcc gcgtcaccaa agcaaaagca 420 tgggcgaaca ggcccatgaa cagaaagccc aggatgtaca ggatgtacag aagtccagat 480 gttcctagag gatgtgaagg tccatgtaag gttcagtcgt ttgagtccag acatgatatt 540 cagcatatag gtaaagtaat gtgtgttagt gatgttactc gtggtactgg gctgacccat 600 agagttggta agagattttg tgttaagtct gtttatgtgt tgggtaagat ctggatggat 660 gagaacatta agacgaagaa tcacacgaat agtgtgatgt ttttcttggt tagagatcgt 720 agacctgttg ataaacctca agattttgga gaggtattta atatgtttga taatgagccc 780 agtacggcga ctgtgaagaa tgttcatcgt gataggtatc aagttctgcg caaatggtat 840 gcaactgtca ccggtggaca atacgcttca aaggaacaag ctctcgtgaa gaaatttatt 900 agagttaata attatgttgt gtataaccag caggaagctg gcaagtatga gaatcattct 960 gagaatgctt taatgttgta tatggcgtgt actcacgcct ctaacccagt gtatgctacc 1020 ttgaagatac ggatctactt ctatgattcc gtgacaaatt aatagatatt gaattttatt 1080 gaagatgatt ggtctacaaa tacaacatgt tgtaatacat tccataatac atgatcaact 1140 gctctaacta cattattaat actgacaatt cctaagttat ttaaatattt aagcacttga 1200 gtcctaaaga cccttaagaa acgaccagtc ggaggctgtg aggtcatcca gattcggaaa 1260 gctatgaaac atttgtgtat ccccaacgct ttcctcaggt tgtgattgaa ctgtatctgg 1320 acggtgatga tgtctctgtt cattaggaat gctcgattgt ggtgctctgt tatcttgaaa 1380 tacaggggat tttgaatctc ccagataaac acgccattct ctgcttgagc tgcagtgatg 1440 agttcccctg tgcgtgaatc catggttgtg gcaggctaat gctatgaagt acgaacaccc 1500 acaagggaga tcaactctcc gacgtctggt ccccttcttg gctagcctgt gctgcacttt 1560 gattggaacc tgagtagagt gggctctcga gggtgatgaa gattgcattc tttaaagccc 1620 aatttttgag tgcagaattc ttctcttcat ccaaaaactc tttatagctt gaattgggtc 1680 ctggattgca gaggaagata gtgggaattc cgcctttaat ttgaactggc ttcccgtatt 1740 ttgtatttga ttgccagtcc ttttgggccc ccatgaactc cttaaagtgc tttaggtaat 1800 gcgggtcgac gtcatcaatg acgttaaacc aggcgtcatt actgtatacc cttgggctca 1860 gatctagatg tccacacaga taattatgtg gacctaatga tctggcccac atcgtcttcc 1920 ccgtcctact gtcaccctca atcactacac ttattggtct attggcccgc gcagcggcac 1980 tgacgacgtt ctcggcagcc cacacttcaa gttcttctgg aacttgatcg aaagaagaag 2040 aggaaaaagg agaaacataa ggagctggtg gctcctgaaa gattctgtct agatttgcat 2100 ttaaattatg aaattgcagt acaaaatcct taggagctag ttccttaatg actctaagag 2160 cctccgactt acttcccgcg ttaagtgctg cggcgtaagc gtcattggct gtctgttgcc 2220 ctcctcttgc tgaccttccg tcgatctgaa attgccccca gtcgagaatg tccccgtcct 2280 tctcgatgta ggatttgacg tcggagctgg atttagctcc ctgtatgttc ggatggaaat 2340 gtgctgacct gcttggggag accaagtcga agaatcgcat attctggcac ttgaatttcc 2400 cttcgaactg gatgagaaca tgcaagtgag gagtcccatc ttcgtgaagc tctctgcaga 2460 ttctaatata tttttttgaa gttggggttt gtatatttaa taattgggaa agtgcttcct 2520 ctttggtgag agaacatttg ggataagtta tgaaatagtt tttggaataa ataccgttcc 2580 gctttggagg catgttgact aaaattgaat caccgattga ccgttcttgc aaactctccc 2640 cggtatatcg gtgatcaata tatagtgatc accaaatggc ataatggtaa taaaaaaact 2700 ttaatttgaa attcaaacca aaaggctaaa gcggccatcc gtttaatatt 2750 //