Dbfetch
ID AJ495814; SV 1; circular; genomic DNA; STD; VRL; 2749 BP. XX AC AJ495814; XX DT 30-JUL-2002 (Rel. 72, Created) DT 15-APR-2005 (Rel. 83, Last updated, Version 5) XX DE Stachytarpheta leaf curl virus-[Hn5] complete genome, isolate Hn5 XX KW AC1 gene; AC2 gene; AC3 gene; AC4 gene; AV1 gene; AV2 gene; rep protein; KW coat protein; complete genome; pre-coat protein; KW replication enhancer protein; trancriptional activator protein; KW transcriptional regulator protein. XX OS Stachytarpheta leaf curl virus - [Hn5] OC Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; OC Geplafuvirales; Geminiviridae; Begomovirus; Stachytarpheta leaf curl virus. XX RN [1] RP 1-2749 RA Zhou X.; RT ; RL Submitted (13-JUL-2002) to the INSDC. RL Zhou X., Zhejiang University, Institute of Biotechnology, Kaixuan Road 268, RL Hangzhou, Zhejiang,310029, CHINA. XX RN [2] RA Zhou X., Fan S.; RT "Stachytarpheta leaf curl virus, a new begomovirus species"; RL Unpublished. XX DR MD5; 0ae6f2ef7df2cb93da89c9b37b0be209. DR EuropePMC; PMC3126389; 21378048. XX FH Key Location/Qualifiers FH FT source 1..2749 FT /organism="Stachytarpheta leaf curl virus - [Hn5]" FT /segment="DNA-A" FT /host="Stachytarpheta jamaicensis" FT /isolate="Hn5" FT /mol_type="genomic DNA" FT /country="China:Hainan province" FT /db_xref="taxon:223329" FT CDS 130..480 FT /gene="AV2" FT /product="pre-coat protein" FT /db_xref="GOA:Q8JLM0" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q8JLM0" FT /protein_id="CAD42627.1" FT /translation="MWDPLVNEFPETVHGLRCMLAVKYLQLVEQTYSPDTLGYDLVRDL FT ILVIRARDYVEASRRYSHFHSRIQGASPAELRQPVCQPCCCPHCPRHKQKEDVGESAHV FT SQAQTIQNVQKS" FT CDS 290..1063 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:Q8JLL9" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q8JLL9" FT /protein_id="CAD42628.1" FT /translation="MSKRPADIVISTPASKVRRRLNFDSPYVNRAAAPTVLVTNKRRTW FT VNRPMYRKPRLFRTYRSPDVPKGCEGPCKVQSYEQRHDISHVGKVLCVSDVTRGSGLTH FT RVGKRFCVKSVYVLGKIWMDENIKTKNHTNTVMFYLVRDRRPFGTAMDFGQVFNMYDNE FT PSTATIKNDLRDRYQVLRKFTSTVTGGQYASKEQALVRKFMKINNYVVYNHQEAAKYEN FT HTENALLLYMACTHASNPVYATLKIKIYFYDSVQN" FT CDS complement(1060..1464) FT /gene="AC3" FT /product="replication enhancer protein" FT /db_xref="GOA:Q8JLL8" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q8JLL8" FT /protein_id="CAD42629.1" FT /translation="MDFRTGEPITAAQAENGVYIWTVRNPLYFKITQHDQRPFSTNHDV FT ITLQVQFNYNLRKALGIHQCFLICRIWTHLRPQTWCFLKVFKYQCIKYLDNLGVISINN FT VIRAFSHVLYNVLEGTIDEELSSIIKFNFY" FT CDS complement(1205..1609) FT /gene="AC2" FT /product="transcriptional activator protein" FT /db_xref="GOA:Q8JLL7" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q8JLL7" FT /protein_id="CAD42630.1" FT /translation="MRSSSPSNGHSTQVPIKVQHKIAKRTTRRRRVDLPCGCSYFIAIG FT CHNHGFSHRGTHHCSSSREWRVYLDGQKSPIFQNHPARPEAVLNEPRRNNTPSPIQLQP FT EESVGDTPMFSNLQNLDSFTSSDLVFFKSI" FT CDS complement(1512..2597) FT /gene="AC1" FT /product="rep protein" FT /db_xref="GOA:Q8JLL6" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q8JLL6" FT /protein_id="CAD42631.1" FT /translation="MPPPRRFKIQAKNYFLTYPQCSLTKEEALSQLQNLETPTNKKYIK FT ICRELHEDGSPHIHVLIQFEGKYVCTNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYI FT DKDGDTLEWGEFQIDGRSARGGQQSANDAYAAALNTGSKSEALNVIKELAPKDYVLQFH FT NLNANLDRIFAPPLEVFVCPFSSSSFDQVPEELHEWSANNVVNAAARPLRPISIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEEKNSALKNWAIHNAIFVTIQRPL FT YSGSNQGATQNSQANNEETTS" FT CDS complement(2150..2440) FT /gene="AC4" FT /product="transcriptional regulator protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q8JLL5" FT /protein_id="CAD42632.1" FT /translation="MGALISTCLSSSRENTSARITDSSTWSPQPGQHISIRTFRELNPA FT PTSSPISIRTETPSSGESFRSTDDLQEGDNNQPMTLTPQHLTQAVSQRLLM" XX SQ Sequence 2749 BP; 751 A; 541 C; 617 G; 840 T; 0 other; ccggatggcc gcgatttttt taaggtggtc ccacccacgt gcattggtcg gccactgaga 60 acgctccctc aaagcctatt taattcaaat gtattataaa tacttggtcc ccaagtacta 120 aagctaaaca tgtgggatcc acttgtaaac gagttccctg aaaccgtaca tggtctacgg 180 tgcatgctcg ctgtaaaata cttgcagtta gttgagcaga catactctcc ggatacgttg 240 gggtacgatc tcgtgcgaga tttaatttta gttatcagag ctcgagacta tgtcgaagcg 300 tcccgccgat atagtcattt ccactcccgc atccaaggtg cgtcgccggc tgaacttcga 360 cagcccgtat gtcaaccgtg ctgctgcccc cactgtcctc gtcacaaaca aaaggaggac 420 gtgggtgaat cggcccatgt atcgcaagcc cagactattc agaacgtaca gaagtcctga 480 tgtgcccaaa ggttgtgaag gcccatgcaa agtccaatcg tatgaacaga ggcacgacat 540 atcccatgtg ggtaaagtat tatgtgttag tgatgtcact cgtggtagtg ggcttaccca 600 tcgtgttggt aagagattct gtgtgaagtc cgtttatgta ttgggtaaaa tatggatgga 660 tgaaaatatc aagacgaaga accatacgaa cactgtgatg ttttatcttg ttcgtgatag 720 aaggcccttt ggtactgcta tggactttgg tcaggtgttt aacatgtatg ataatgagcc 780 cagtactgct actatcaaga atgatcttcg agatcgttat caagttttga ggaaattcac 840 ttcaacagtc acaggtggtc aatatgcttc taaggaacag gcgttggtta ggaaatttat 900 gaagataaat aattatgtag tttataatca tcaagaagct gctaagtatg agaatcatac 960 tgagaatgcg ttattattgt atatggcatg tactcatgcc agtaatccag tgtatgctac 1020 tttgaagatc aaaatctatt tctatgattc tgttcagaat taataaaaat tgaattttat 1080 tatacttgat aattcttcat caattgtccc ctctaataca ttgtataata catgagaaaa 1140 tgccctaatt acattgttta tactaatcac tcccaaattg tctaaatatt taatacattg 1200 atacttaaat acttttaaaa aacaccaagt ctgaggacgt aaatgagtcc aaattctgca 1260 gattagaaaa cattggtgta tccccaacgc tttcctcagg ttgtagttga attggacttg 1320 gagtgttatt acgtcgtggt tcgttgagaa cggcctctgg tcgtgctggg tgattttgaa 1380 atatagggga tttctgaccg tccagatata cacgccattc tctgcttgag ctgcagtgat 1440 gggttccccg gtgcgaaaat ccatgattgt ggcagcctat agctatgaaa taagagcatc 1500 cacaagggag gtcaactcgt cgtctcctcg ttgttcgctt ggctattttg tgttgcacct 1560 tgattggaac ctgagtagag tggccgttgg atggtgacga agatcgcatt atgtatagcc 1620 caatttttta atgcggaatt cttttcttcg tctaagaact ctttatagct ggaattgggt 1680 cctggattgc ataggaagat tgttgggata ccacctttaa tttgaactgg cttcccatac 1740 tttgtattgg attgccagtc cctttgggcc cccatgaatt ccttaaagtg ctttagatag 1800 tgggggtcga cgtcatcaat gacgttatac caagcatcat tgctgtatac ctttgggctg 1860 agatcaagat gtccacacag ataattgtgt ggtcctaacg acctagccca cattgtttta 1920 ccagtacgac tatcaccttc tatcacaata ctaatcggtc tcaaaggccg cgcagcggca 1980 ttgacaacat tatttgcaga ccattcatga agttcttctg gaacttgatc gaaagaagaa 2040 gaagaaaaag gacaaacaaa tacctctaaa ggaggtgcaa aaatcctatc taaattagca 2100 tttaaattat gaaattgtaa aacataatct tttggagcta actccttaat tacattaaga 2160 gcctctgact tactgcctgt gttaagtgct gcggcgtaag cgtcattggc tgattgttgt 2220 ccccctcttg cagatcgtcc gtcgatctga aactctcccc actcgagggt gtctccgtcc 2280 ttatcgatat aggacttgac gtcggagctg gatttagctc cctgaatgtt cggatggaaa 2340 tgtgctgacc tggttgggga gaccaagtcg aagaatctgt tattcgtgca gacgtatttt 2400 ccctcgaact ggataagcac gtggatatga gggctcccat cttcgtgaag ctctctgcag 2460 attttgatgt attttttgtt ggttggggtt tctaggtttt gaagttggga gagtgcttcc 2520 tctttagtta gagagcactg tggataagtg aggaaataat ttttagcttg tattttaaaa 2580 cgacgcgggg gaggcatttt gagcgtcgtt ttgtattgga gacaatcaac tctatgaaat 2640 gaattggaga ctggagtaca atatatagtg tgtctccaaa tggcattctc gtaattcctc 2700 atagaaattc aaaatttgaa ttggtaaagc ggccatccgt ataatatta 2749 //