ID   AJ493579; SV 1; linear; genomic RNA; STD; VRL; 1668 BP.
XX
AC   AJ493579;
XX
DT   10-FEB-2003 (Rel. 74, Created)
DT   10-FEB-2003 (Rel. 74, Last updated, Version 1)
XX
DE   Narcissus late season yellow virus partial gene for polyprotein, genomic
DE   RNA
XX
KW   coat protein; NIb protein; polyprotein.
XX
OS   Narcissus late season yellows virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1668
RA   Adams M.J.;
RT   ;
RL   Submitted (08-JUL-2002) to the INSDC.
RL   Adams M.J., Plant Pathogen Interactions Division, IACR-Rothamsted,
RL   Harpenden, Herts AL5 2JQ, UNITED KINGDOM.
XX
RN   [2]
RA   Chen J., Chen J., Langeveld S.A., Derks A.F.L.M., Adams M.J.;
RT   "Molecular characterization of carla- and potyviruses from Narcissus in
RT   China";
RL   J. Phytopathol. 151:26-29(2003).
XX
DR   MD5; 4f68d98f40173ed5c0b56b8b9f549475.
DR   EuropePMC; PMC3170305; 21854646.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1668
FT                   /organism="Narcissus late season yellows virus"
FT                   /host="Narcissus"
FT                   /isolate="Hangzhou 2"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Zhejiang"
FT                   /db_xref="taxon:160842"
FT   CDS             <1..1458
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q80P35"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:Q80P35"
FT                   /protein_id="CAD38487.1"
FT                   /translation="GNNSGQPSTAVDNTLMVILAMRYSLLKAGVLVEQHDEMCRFLVNG
FT                   DDLLLALAPEFEFILDDLASSFSELGLKYTFDQRTREKGDLWFMSHKGIKREGIWIPKL
FT                   EPERVVSILEWDRSKEPAHRLEAICAAMIESWGYDELTREIRKFYTWLLSQAPYSGLAQ
FT                   EGKAPYIAETALRKLYLNKDAEQSDIMRYMEAILEDFDDKTPLEVYHQSGKQTLDAGAE
FT                   EERNNSKSKEKKTTDESGGRPPPMGKDKDVNVGVSGSFPVPRLKMITHKLTLPLYNRRI
FT                   ALNLDHLITYTPRQVDLSNTRATQRQFDTWYEGVMADYDVDEAKMAIILNGFMVWCIEN
FT                   GTSPNINGVWVMMDGEEQVEFPLKPIIEHAKPTLRQIMAHFSNGAEAYIEMRNYQQPYM
FT                   PRYGLQRNLTDMSLARFAFDFYEMTSKTPIRAREAHLQMKAAALRGTQNHLFGLDGNVG
FT                   TTEENTERHTTDDVNRNMHSLLGVRGV"
FT   mat_peptide     <1..633
FT                   /product="NIb protein"
FT   mat_peptide     634..1455
FT                   /product="coat protein"
FT   3'UTR           1459..1668
XX
SQ   Sequence 1668 BP; 531 A; 326 C; 403 G; 408 T; 0 other;
     gggaacaata gcgggcaacc ttcaactgca gtcgataaca cgttaatggt catcctagca        60
     atgcgatact cattgttgaa ggcaggagtg ctcgtagagc agcatgacga aatgtgtaga       120
     tttcttgtca atggagacga ccttctttta gccttagcac cagagttcga atttatactt       180
     gatgatttag ccagcagttt ttcagaactt gggctaaagt atacttttga tcagcgaacg       240
     cgggagaaag gcgatttatg gttcatgtca cacaagggaa tcaagcgtga aggcatttgg       300
     attccgaaac tcgagcctga acgcgtggtc tcaattctag aatgggatag gtcaaaagaa       360
     ccagcacaca ggttggaggc tatatgcgct gcgatgattg aatcatgggg ttatgatgag       420
     ttaacacgtg aaatacgaaa gttttacact tggcttctat ctcaagcacc ttacagtggt       480
     ttggctcagg agggaaaagc accatatatt gctgagacgg ctcttaggaa gttatactta       540
     aataaagacg ccgagcaaag tgacattatg cgttacatgg aagcaatctt ggaagatttt       600
     gacgataaaa caccacttga agtctatcac caatcaggca agcaaacttt ggatgctggt       660
     gctgaggaag aacgaaacaa ctccaagagc aaagagaaga aaacaactga cgaatcaggt       720
     gggagacctc cacccatggg caaagacaaa gatgtgaacg ttggtgtcag tggcagtttc       780
     ccagtgccac gactgaaaat gataacacac aagttgacat taccattgta caacagacgc       840
     atagccctta atctagacca tcttatcaca tacacaccac gacaagtgga cttatcgaac       900
     acaagggcca cacaaaggca gtttgacaca tggtacgaag gggttatggc ggactatgat       960
     gtcgatgaag cgaagatggc aattatactt aatggattta tggtgtggtg tattgagaat      1020
     ggaacatcac caaatattaa tggagtgtgg gttatgatgg atggagagga acaggttgaa      1080
     tttcctctga aaccaatcat tgaacacgcc aaaccaacac tcaggcaaat aatggcccat      1140
     ttcagtaacg gtgctgaagc gtatattgag atgagaaact accaacaacc gtacatgcca      1200
     cggtacggcc tgcagcgaaa tttaaccgac atgagcctgg cccgcttcgc ttttgatttc      1260
     tatgaaatga cttcaaaaac accaatccga gcgcgagaag cacacttgca aatgaaagca      1320
     gcagctcttc ggggcacgca gaatcacttg ttcggcttgg atggaaatgt tggtacgaca      1380
     gaagagaaca cggagagaca caccaccgat gatgtaaata ggaatatgca tagcctttta      1440
     ggcgtaaggg gcgtgtagta ttgtgtgttg gtatttatag caaaatatat aaatactcgt      1500
     tagtattctc aactatagag aaatattatc acacaaggat gctagtttgg cgctgccaag      1560
     aatgtaatct tgtgtctata tatatttcga tcgaaaacgg cggatttgct gaagaatcag      1620
     tgagagcttc tctccaacag tcttcaccaa gtttggtgtt ctagagac                   1668
//