ID   AJ489259; SV 2; linear; genomic RNA; STD; VRL; 1708 BP.
XX
AC   AJ489259;
XX
DT   06-AUG-2002 (Rel. 72, Created)
DT   22-SEP-2003 (Rel. 77, Last updated, Version 3)
XX
DE   Turnip Mosaic Virus partial gene for partial polyprotein, genomic RNA
XX
KW   coat protein; NIb protein; polyprotein.
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RC   revised by [3]
RA   Segundo E.;
RT   ;
RL   Submitted (05-JUN-2002) to the INSDC.
RL   Segundo E., Unidad de Virologia, CIFA Almeria, El Ejido PO Box 91, Almeria
RL   E-04700, SPAIN.
XX
RN   [2]
RX   AGRICOLA; IND44781894.
RA   Segundo E., Martin-Bretones G., Velasco L., Ruiz L., Janssen D.,
RA   Cuadrado I.M.;
RT   "First Report of Turnip mosaic virus in Pisum sativum in Spain";
RL   Plant Dis. 87(1):103-103(2003).
XX
RN   [3]
RP   1-1708
RA   Segundo E.;
RT   ;
RL   Submitted (09-AUG-2002) to the INSDC.
RL   Segundo E., Unidad de Virologia, CIFA Almeria, El Ejido PO Box 91, Almeria
RL   E-04700, SPAIN.
XX
DR   MD5; 53482ff2cc8c9e7a94587283b087eec1.
DR   EuropePMC; PMC3583878; 23460860.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1708
FT                   /organism="Turnip mosaic virus"
FT                   /strain="SP1"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             <1..1500
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q8JJU9"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:Q8JJU9"
FT                   /protein_id="CAD33245.2"
FT                   /translation="GNNSGQPSTVVDNTLMVILAVNYSLKKSGIPHELRDGIIKFFVNG
FT                   DDLLLSVHPQYEFVLDTMADNFRELGLKYTFDSRTREKGDLWFMSHQGHKREGIWIPKL
FT                   EPERIVSILEWDRSKEPCHHLEAICAAMIESWGYDKLTHEIRKFYAWMIEQAPFSSLAQ
FT                   EGKAPYIAETALRKLYLDKEPAQEDLTHYLQAIFEDYEDDVEVCVYHQANETLDAGLTE
FT                   EQKQAEKERKEKEKAEKEREKQKQLALKKGKDVEKEEGKRDREVNAGTSGTFSVPRLKS
FT                   LTSKMRVPKYDQRVALNLDHLILYTPEQTDLSNTRSTQKQFDTWFEGVMADYELTEDKM
FT                   QIILNGLMVWCIENGTSPNINGMWVMMDGDDQVEFPIKPLIDHAKPTFRQIMAHFSDVA
FT                   EAYIEKRNQGRPYMPRYGLQRNLTDMSLARYAFDFYEMTSRTPIRAREAHIQMKAAALR
FT                   GANNNLFGLDGNVGTTVENTERHTTEDVNRNMHNLLGVKGL"
FT   mat_peptide     <1..633
FT                   /product="NIb protein"
FT   mat_peptide     634..1497
FT                   /product="coat protein"
FT   3'UTR           1501..1708
XX
SQ   Sequence 1708 BP; 542 A; 336 C; 425 G; 405 T; 0 other;
     gggaataaca gtggacagcc atcaacagtc gtagacaaca cgcttatggt catattggcg        60
     gttaattact cactcaagaa aagtgggatt ccacacgaac tacgcgatgg tattatcaaa       120
     ttcttcgtca atggagatga tttactgttg agcgtacacc cacaatacga gttcgtcctt       180
     gacaccatgg cggataattt ccgagagttg ggactgaaat acaccttcga ctcacgaact       240
     agagagaaag gagatctttg gttcatgtct catcaaggtc acaaacgaga aggaatttgg       300
     attcctaagc tggaaccgga gcgaatagtg tcgatccttg aatgggaccg atcaaaagag       360
     ccatgccacc acttagaagc tatctgtgca gcaatgattg agtcttgggg ttatgataaa       420
     ctcacccacg aaatacgcaa gttctacgca tggatgattg aacaggctcc attcagctcg       480
     ttagcacagg aaggaaaggc tccttatata gcagagacag cactgaggaa gctgtacctt       540
     gacaaagaac cggctcaaga agatttaact cactacttac aagcgatctt cgaagattac       600
     gaggatgatg tcgaagtttg tgtgtaccat caagcaaacg aaacacttga tgctggttta       660
     acagaggagc aaaaacaagc agagaaagag aggaaagaga aggagaaggc agaaaaagag       720
     cgagaaaagc aaaaacagct agcgcttaag aaaggcaaag atgtcgagaa agaggaagga       780
     aaacgcgaca gagaagtgaa cgctggcact tcaggaactt ttagtgtacc taggctcaag       840
     agtctaacta gcaaaatgcg tgtgccaaag tatgatcaga gagtggctct taatcttgac       900
     catctaatcc tttacacgcc agagcaaaca gacttatcca acacgcgttc aacgcagaag       960
     cagttcgata catggtttga aggggttatg gccgattacg aactgacgga ggacaaaatg      1020
     caaatcattc tcaacggttt aatggtctgg tgcattgaga atggaacttc cccgaacata      1080
     aacggaatgt gggtgatgat ggacggtgac gatcaggtgg aatttccgat caagccgctc      1140
     attgaccacg ccaaacccac atttaggcaa ataatggccc atttcagtga cgtagctgaa      1200
     gcgtacattg aaaagcgtaa ccaaggccgg ccatacatgc cacgatatgg tcttcagcgc      1260
     aatttaaccg acatgagctt agctcgttac gcatttgatt tctatgaaat gacttctaga      1320
     actccgatac gtgcgagaga ggcacacatc cagatgaaag cagcagcact gcgtggcgca      1380
     aataacaatt tgttcggatt ggatggtaac gttggtacaa cggtagagaa cacggagaga      1440
     cacacaaccg aggacgtgaa tcggaacatg cataacttgc ttggcgtaaa ggggttatga      1500
     agttgtgtgt tggtagacta taagtattta agtttactcg ttagtattct cgcttatggg      1560
     aaatatgtaa gtttgttaaa gcagccagtg tgactttgtc acgtgtgttg ttgttacttt      1620
     caatattttc gccgaacatt ttattggtgt tagcgcatgt ggtgaggatc ttcctcgatt      1680
     gccttaacat ttgataggat gcaaggga                                         1708
//