ID AJ489258; SV 1; circular; genomic DNA; STD; VRL; 2781 BP. XX AC AJ489258; XX DT 07-JUN-2002 (Rel. 72, Created) DT 21-APR-2009 (Rel. 100, Last updated, Version 4) XX DE Tomato yellow leaf curl virus-[Almeria] complete genome, isolate Almeria XX KW c2 gene; C2 protein; c3 gene; C3 protein; c4 gene; C4 protein; KW coat protein; cp gene; precoat protein; rep gene; KW replication-associated protein; v2 gene. XX OS Tomato yellow leaf curl virus-[Almeria] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2781 RA Morilla G.; RT ; RL Submitted (04-JUN-2002) to the INSDC. RL Morilla G., Departamento de Genetica, Universidad de Malaga, 29071, Malaga, RL SPAIN. XX RN [2] RX DOI; 10.1094/PHYTO-95-1089. RX PUBMED; 18943307. RA Morilla G., Janssen D., Garcia-Andres S., Moriones E., Cuadrado I.M., RA Bejarano E.R.; RT "Pepper (Capsicum annuum) Is a Dead-End Host for Tomato yellow leaf curl RT virus"; RL Phytopathology 95(9):1089-1097(2005). XX DR MD5; 106f4a22750901b9d888d3e37d6c822f. DR EuropePMC; PMC2224568; 17977971. DR EuropePMC; PMC3629040; 23613872. DR EuropePMC; PMC4156758; 25136118. DR EuropePMC; PMC4452918; 26008699. DR EuropePMC; PMC4958995; 27453359. DR EuropePMC; PMC4967916; 27476582. DR EuropePMC; PMC5438015; 28471116. DR EuropePMC; PMC5691627; 28946693. DR EuropePMC; PMC5744400; 29312406. DR EuropePMC; PMC6164481; 30177671. DR EuropePMC; PMC6356960; 30634476. DR EuropePMC; PMC6362282; 30718735. DR EuropePMC; PMC6393547; 30814535. DR EuropePMC; PMC6611054; 31272383. XX FH Key Location/Qualifiers FH FT source 1..2781 FT /organism="Tomato yellow leaf curl virus-[Almeria]" FT /host="Capsicum anuum" FT /isolate="Almeria" FT /mol_type="genomic DNA" FT /country="Spain:Almeria" FT /db_xref="taxon:220938" FT CDS 155..505 FT /gene="v2" FT /product="precoat protein" FT /function="movement" FT /db_xref="GOA:Q777L1" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q777L1" FT /protein_id="CAD33247.1" FT /translation="MWDPLLNEFPESVHGFRCMLAIKYLQSVEETYEPNTLGHDLIRDL FT ISVVRARDYVEATRRYNHFHARLEGSPKAELRQPIQQPCCCPHCPRHKQATIMDVQAHV FT PKAQNIQNVSKP" FT CDS 315..1091 FT /gene="cp" FT /product="coat protein" FT /function="coat protein" FT /db_xref="GOA:Q8JJU0" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q8JJU0" FT /protein_id="CAD33248.1" FT /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYSSRAAVPIVQGTNKRRSW FT TYRPMYRKPRIYRMYRSPDVPRGCEGPCKVQSYEQRDDIKHTGIVRCVSDVTRGSGITH FT RVGKRFCVKSIYFLGKVWMDENIKKQNHTNQVMFFLVRDRRPYGSSPMDFGQVFNMFDN FT EPSTATVKNDLRDRFQVMRKFHATVIGGPSGMKEQALVKRFFKINSHVTYNHQEAAKYE FT NHTENALLLYMACTHASNPVYVTMKIRIYFYDSISN" FT CDS complement(1088..1492) FT /gene="c3" FT /product="C3 protein" FT /db_xref="GOA:Q8JJT9" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q8JJT9" FT /protein_id="CAD33249.1" FT /translation="MDSRTGELITAPQAENGVFIWEINNPLYFKITEHSQRPFLMNHDI FT ISIQIRFNHNIRKVMGIHKCFLNFRIWTTLQPQTGHFLRVFRYEVLKYLDSLGVISINN FT VIRAVDHVLYDVLENTINVTETHDIKYKFY" FT CDS complement(1233..1640) FT /gene="c2" FT /product="C2 protein" FT /db_xref="GOA:Q8JJT8" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q8JJT8" FT /protein_id="CAD33250.1" FT /translation="MQPSSPSTSHCSQVSIKVQHKIAKKKPIRRKRVDLDCGCSYYLHL FT NCNNHGFTHRGTHHCSSGREWRFYLGDKQSPLFQDNRTQPAAISNEPRHHFHSDKIQPQ FT HQEGNGDSQMFSQLPNLDDITASDWSFLKSI" FT CDS complement(1549..2622) FT /gene="rep" FT /product="replication-associated protein" FT /db_xref="GOA:Q8JJT7" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q8JJT7" FT /protein_id="CAD33251.1" FT /translation="MPRLFKIYAKNYFLTYPNCSLSKEEALSQLKNLETPTNKKYIKVC FT RELHENGEPHLHVLIQFEGKYQCKNQRFFDLVSPNRSAHFHPNIQAAKSSTDVKTYVEK FT DGDFIDFGVFQIDGRSARGGQQSANDAYAEALNSGNKSEALNILKEKAPKDYILQFHNL FT SSNLDRIFSPPLEVYVSPFLSSSFNQVPDELEEWVAENVVSSAARPWRPNSIVIEGDSR FT TGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQS FT NTKYGKPIQIKGGIPTIFLCNPGPTSSYREYLDEEKNISLKNWALKNATFVTLYEPLFA FT SINQGPTQDSQEETNKA" FT CDS complement(2178..2471) FT /gene="c4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q8JJT6" FT /protein_id="CAD33252.1" FT /translation="MGNHISMCLSNSKANTNVRTNGSSTWYPQTDQHISIRTFRQLRAQ FT QMSRPTWRKTETSLILEFSKSMADQLEEVSNLPTTHMPKHSIQAINPRPSIY" XX SQ Sequence 2781 BP; 763 A; 535 C; 604 G; 879 T; 0 other; taatattacc ggatggccgc gccttttcct tttatgtggt ccccacgagg gttccacaga 60 cgtcactgtc aaccaatcaa attgcatact caaacgttaa ataagtgttc atttgtcttt 120 atatacttgg tccccaagta ttttgtcttg caatatgtgg gacccacttc taaatgaatt 180 tcctgaatct gttcacggat ttcgttgtat gttagctatt aaatatttgc agtccgttga 240 ggaaacttac gagcccaata cattgggcca cgatttaatt agggatctta tatctgttgt 300 aagggcccgt gactatgtcg aagcgaccag gcgatataat catttccacg cccgtctcga 360 aggttcgccg aaggctgaac ttcgacagcc catacagcag ccgtgctgct gtccccattg 420 tccaaggcac aaacaagcga cgatcatgga cgtacaggcc catgtaccga aagcccagaa 480 tatacagaat gtatcgaagc cctgatgttc cccgtggatg tgaaggccca tgtaaagtcc 540 agtcttatga gcaacgggat gatattaagc acactggtat tgttcgttgt gttagtgatg 600 ttactcgtgg atctggaatt actcacagag tgggtaagag gttctgtgtt aaatcgatat 660 attttttagg taaagtctgg atggatgaaa atatcaagaa gcagaatcac actaatcagg 720 tcatgttctt tttggtccgt gatagaaggc cctatggaag cagcccaatg gattttggac 780 aggtttttaa tatgttcgat aatgagccca gtaccgcaac cgtgaagaat gatttgcgtg 840 ataggtttca agtgatgaga aaatttcatg caacagttat tggtgggccc tctggaatga 900 aggaacaggc attagttaag agatttttta aaattaacag tcatgtaact tataatcatc 960 aggaggcagc caagtacgag aaccatactg aaaacgcctt gttattgtat atggcatgta 1020 cgcatgcctc taatccagtg tatgtaacta tgaaaatacg catctatttc tatgattcaa 1080 tatcaaatta ataaaattta tattttatat catgagtttc tgttacattt attgtgtttt 1140 caagtacatc atacaataca tgatcaactg ctctgattac attgttaatg gaaattacac 1200 caagactatc taaatactta agaacttcat atctaaatac tcttaagaaa tgaccagtct 1260 gaggctgtaa tgtcgtccaa attcggaagt tgagaaaaca tttgtgaatc cccattacct 1320 tcctgatgtt gtggttgaat cttatctgaa tggaaatgat gtcgtggttc attagaaatg 1380 gccgctggct gtgttctgtt atcttgaaat agaggggatt gtttatctcc caaataaaaa 1440 cgccattctc tgcctgagga gcagtgatga gttcccctgt gcgtgaatcc atgattgttg 1500 cagttgaggt ggaggtagta tgagcagcca cagtctaggt ctacacgctt acgccttatt 1560 ggtttcttct tggctatctt gtgttggacc ttgattgata cttgcgaaca gtggctcgta 1620 gagggtgacg aaggttgcat tcttgagcgc ccaatttttc aaggatatat ttttttcttc 1680 gtctagatat tccctatatg aggaggtagg tcctggattg cagaggaaga tagtgggaat 1740 tcccccttta atttgaatgg gcttcccgta ctttgtgttg ctttgccagt ccctctgggc 1800 ccccatgaat tccttgaagt gctttaaata atgcgggtct acgtcatcaa tgacgttgta 1860 ccacgcatca ttactgtaca cctttgggct taggtctaga tgtccacata aataattatg 1920 tgggcctaga gacctggccc acattgtttt gcctgttctg ctatcaccct caatgacaat 1980 actattaggt ctccatggcc gcgcagcgga agacacgacg ttctcagcga cccactcttc 2040 aagttcatct ggaacttgat taaaagaaga agaaagaaat ggagaaacat aaacttctaa 2100 aggaggacta aaaatcctat ctaaatttga acttaaatta tgaaattgta aaatatagtc 2160 ctttggggcc ttctctttta atatattgag ggcctcggat ttattgcctg aattgagtgc 2220 ttcggcatat gcgtcgttgg cagattgctg acctcctcta gctgatctgc catcgatttg 2280 gaaaactcca aaatcaatga agtctccgtc tttctccacg taggtcttga catctgttga 2340 gctcttagct gcctgaatgt tcggatggaa atgtgctgat ctgtttgggg ataccaggtc 2400 gaagaaccgt tggttcttac attggtattt gccttcgaat tggataagca catggagatg 2460 tggttcccca ttctcgtgga gttctctgca aactttgatg tattttttat ttgttggggt 2520 ttctaggttt tttaattggg aaagtgcttc ctctttagag agagaacaat tgggatatgt 2580 taggaaataa tttttggcat atattttaaa taaacgaggc atgttgaaat gaatcggtgt 2640 ccctcaaagc tctatggcaa tcggtgtatc ggtgtcttat ttatacctgg acacctaatg 2700 gctatttggt aatttcgtaa aagtacattg caattcaaaa ttcaaaattc aaaaatcaaa 2760 tcattaaagc ggccatccgt a 2781 //