ID   AJ488834; SV 1; linear; mRNA; STD; VRL; 1771 BP.
XX
AC   AJ488834;
XX
DT   02-JUN-2003 (Rel. 76, Created)
DT   02-JUN-2003 (Rel. 76, Last updated, Version 1)
XX
DE   Potato virus Y partial gene for polyprotein, genomic RNA
XX
KW   coat protein; CP; NIb; nuclear inclusion protein B; polyprotein.
XX
OS   Potato virus Y
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1771
RA   Adams M.J.;
RT   ;
RL   Submitted (30-MAY-2002) to the INSDC.
RL   Adams M.J., Plant Pathogen Interactions Division, IACR-Rothamsted,
RL   Harpenden, Herts AL5 2JQ, UNITED KINGDOM.
XX
RN   [2]
RA   Chen J., Chen J., Adams M.J.;
RT   "Characterization of potyviruses from vegetables in China";
RL   Unpublished.
XX
DR   MD5; 3eae69342366e4c3150488c7c85aa1ae.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1771
FT                   /organism="Potato virus Y"
FT                   /host="Solanum tuberosum"
FT                   /isolate="Hangzhou"
FT                   /mol_type="mRNA"
FT                   /country="China:Zhejiang"
FT                   /db_xref="taxon:12216"
FT   CDS             <1..1443
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q7THD3"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:Q7THD3"
FT                   /protein_id="CAD32825.1"
FT                   /translation="GNNSGQPSTVVDNSLMVVLAMHYALIKECIEFEEIDSTCVFFVNG
FT                   DDLLIAVNPDKEGILDRLSQHFSDLGLNYDFSSRTRNKEELWFMSHRGLLIEGMYVPKL
FT                   EEERIVSILQWDRADLAEHRLEAICAAMIESWGYSELTHQIRRFYSWLLQQQPFATIAQ
FT                   EGKAPYIASMALRKLYMDRAVDEEELRAFTEMMVALDDEFEFDSYEVHHQANDTIDAGG
FT                   NSKKDAKPEQGSIQPNPNKGKDKDVNAGTSGTHTVPRIKAITSKMRMPKSKGATVLNLE
FT                   HLLEYAPQQIDISNTRATQSQFDTWYEAVRMAYDIGETEMPTVMNGLMVWCIENGTSPN
FT                   VNGVWVMMDGNEQVEYPLKPIVENAKPTLRQIMAHFSDVAEAYIEMRNKKEPYMPRYGL
FT                   IRNLRDVGLARYAFDFYEVTSRTPVRAREAHIQMKAAALKSAQPRLFGLDGGISTQEEN
FT                   TERHTTEDVSPSMHTLLGVKNM"
FT   mat_peptide     <1..639
FT                   /product="nuclear inclusion protein B (NIb)"
FT   mat_peptide     640..1440
FT                   /product="coat protein (CP)"
FT   3'UTR           1444..1771
XX
SQ   Sequence 1771 BP; 534 A; 329 C; 441 G; 467 T; 0 other;
     ggcaataaca gcgggcagcc ttctactgtt gtggacaact ctctcatggt tgtcctcgcc        60
     atgcattatg ctctcatcaa agaatgcatt gagtttgaag agattgacag cacgtgcgtg       120
     ttctttgtca atggtgatga tttgctgatt gctgtgaatc cggataaaga gggtattctt       180
     gacagattgt cacaacactt ctcagatctt ggtttaaatt atgatttctc gtcaagaaca       240
     agaaataagg aagagttgtg gttcatgtct catagaggcc tactgatcga gggcatgtac       300
     gtgccgaaac ttgaagaaga aaggattgtg tccattctcc aatgggacag agcagacttg       360
     gctgaacaca ggcttgaggc gatctgcgca gctatgatag agtcctgggg ttattctgaa       420
     ctaacgcacc aaatcaggag attctactca tggttattgc aacagcaacc ttttgcaaca       480
     atagcgcagg aagggaaggc tccttatata gcaagcatgg cattaaggaa actgtatatg       540
     gatagggctg tggatgagga agagctaaga gccttcactg aaatgatggt cgcattagac       600
     gatgagttcg agttcgactc ttatgaagta caccatcaag caaatgatac aattgatgca       660
     ggaggaaaca gcaagaaaga tgcaaaacca gagcaaggca gcatccagcc aaacccgaac       720
     aaaggaaaag ataaggatgt gaatgctggt acatctggga cacatactgt gccgagaatc       780
     aaggctatca cgtccaaaat gagaatgccc aaaagcaagg gagcaaccgt gctaaactta       840
     gaacacttgc tcgagtatgc tccacaacaa attgatattt caaatactcg ggcaactcaa       900
     tcacagtttg atacgtggta tgaggcagtg cggatggcat acgacatagg agaaactgag       960
     atgccaactg tgatgaatgg gcttatggtt tggtgcatcg aaaatggaac ctcgccaaat      1020
     gtcaacggag tttgggttat gatggatggg aatgaacaag ttgaataccc gttgaaacca      1080
     atcgttgaga atgcaaaacc aacccttagg caaatcatgg cacatttctc agatgttgca      1140
     gaagcgtata tagaaatgcg caataaaaag gaaccatata tgccacgata tggtttaatt      1200
     cgaaatctgc gggatgtagg tttagcgcgc tatgccttcg acttttatga ggtcacatca      1260
     cgaacaccag tgagggctag ggaagcgcac attcaaatga aggccgcagc attgaaatca      1320
     gcccaacctc gacttttcgg gttggacggt ggcatcagta cacaagagga gaacacagag      1380
     aggcacacca ccgaggatgt ctctccaagt atgcatactc tacttggagt caagaacatg      1440
     tgatgtagtg tctctccgga cgatatataa gtatttacat atgcagtaag tattttggct      1500
     tttcctgtac tacttttatc ataattaata atcagtttga atattactaa tagatagagg      1560
     tggcagggtg atttcgtcat tgtggtgact ctatctgtta attccgcatt attaagtttt      1620
     aggtaaaagt gccgggttgt cgttgttgtg gatgatttat cgattaggtg atgttgcgat      1680
     tttgtcgtag cagtgactat gtctggatct atctgcttgg gtggtgttgt gattttgtca      1740
     taacagtgac tgtaaacttc aatcaggaga c                                     1771
//