ID AJ488768; SV 2; linear; genomic DNA; STD; VRL; 2622 BP. XX AC AJ488768; XX DT 03-JUN-2002 (Rel. 72, Created) DT 26-AUG-2010 (Rel. 105, Last updated, Version 5) XX DE Tobacco leaf rugose virus DNA-A, complete sequence XX KW . XX OS Tobacco leaf rugose virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RC revised by [3] RA Ramos P.L.; RT ; RL Submitted (28-MAY-2002) to the INSDC. RL Ramos P.L., Dpto. de Plantas, Ctro Ingenieria Genetica y Biotecnologia, Ave RL 31 e/ 158 y 190, Playa, Apdo Postal 6162, CP 10600, La Habana, CUBA. XX RN [2] RX DOI; 10.1094/PDIS.2002.86.9.1050A. RX AGRICOLA; IND23328224. RA Dominguez M., Ramos P.L., Echemendia A.L., Peral R., Crespo J., Andino V., RA Pujol M., Borroto C.; RT "Molecular characterization of tobacco leaf rugose virus, a new begomovirus RT infecting tobacco in Cuba"; RL Plant Dis. 86(9):1050-1050(2002). XX RN [3] RP 1-2622 RA Ramos P.L.; RT ; RL Submitted (30-MAY-2008) to the INSDC. RL Ramos P.L., Dpto. de Plantas, Ctro Ingenieria Genetica y Biotecnologia, Ave RL 31 e/ 158 y 190, Playa, Apdo Postal 6162, CP 10600, La Habana, CUBA. XX DR MD5; f6d1fe88bb4fcf7721a127685f8353be. XX FH Key Location/Qualifiers FH FT source 1..2622 FT /organism="Tobacco leaf rugose virus" FT /segment="DNA-A" FT /host="Nicotiana tabacum" FT /mol_type="genomic DNA" FT /country="Cuba:Havana" FT /db_xref="taxon:196691" FT CDS 197..952 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:Q8JJV0" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q8JJV0" FT /protein_id="CAD32807.1" FT /translation="MVKRDAPWRSMAGPSKVSRNANYSPRGVSGPRVNKAQAWVNRPMY FT RKPMIYRMLRGPDIPKGCEGPCKVQSYEQRHDISHVGKVMCISDVTRGNGITHRVGKRF FT CVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATV FT KNDLRDRYQVMHRFYAKVTGGQYASNEQALVRRFWKVNNHVVYNHQEAGKYENHTENAL FT LLYMACTHASNPVYATLKIRIYFYDSIMN" FT CDS complement(949..1347) FT /gene="AC3" FT /product="replication enhancement protein" FT /db_xref="GOA:B3CJ48" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:B3CJ48" FT /protein_id="CAQ57898.1" FT /translation="MDSRTGELITAHQAENGVYIWEIENPLYFRMYRVEDPLYTRTRVY FT HIQIRFSHNLRRALDLHKAYMNFQVWTTSLTASGQTYLARFRHLVNLYLDQLGVISVNN FT VIRAVRFATDRTYVNYVLENHSIKFKIY" FT CDS complement(1094..1486) FT /gene="AC2" FT /product="transactivator protein" FT /db_xref="GOA:B3CJ49" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:B3CJ49" FT /protein_id="CAQ57899.1" FT /translation="MRSSSPSQPPSIKKAHRQYKKRRAIRRRRIDLQCGCSIYFHIGCT FT GHGFTHRGTHHCTSGGEWRVYLGDRKSPLFQDVQGRGPAVHQDQSIPHPDTVQPQPEES FT VGSPQGVHELPSLDDFPDSFWADIFS" FT CDS complement(1395..2480) FT /gene="AC1" FT /product="replication associated protein" FT /db_xref="GOA:Q8JJV1" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q8JJV1" FT /protein_id="CAD32806.1" FT /translation="MPSVKRFKSQPKTNFITYPQCSLPKEEALSQLQNLETPVNKKFIK FT ICRELHENGEPHLHVLIQFEGKYQCKNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYI FT DKDGDTLEWGEFQIDGRSARGGKQSANDSYAKALNADSVQSAMAVLREEQPKDFVLQNH FT NIRSNLERIFAKAPEQWVPPFQLSSFTNVPEDMQEWADDYFGRGSARPERPLSIIVEGD FT SRTGKTMWARSLGPHNYLSGHLDFNARVYSNEVDYNVIDDVAPHYLKLKHWKELLGAQK FT DWQSNCKYGKPVQIKGGIPSIVLCNPGEGASYKDFLDKEENASLRNWTIKNAVFITLTA FT PLYQEGAQTIQEKEGNQETQD" FT CDS complement(2066..2329) FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:B3CJ50" FT /protein_id="CAQ57900.1" FT /translation="MRMGSLISMCLYSSRENTSARITDSSIWSPQPGQHISIRTYRELN FT PAPTSSPTSTRTEIHWNGENSRSTADLLEEASSLLMIHMPRR" XX SQ Sequence 2622 BP; 620 A; 607 C; 636 G; 759 T; 0 other; accggatggc cgcgcgcccc ccttggtgcc gtactccttt ggtgcgcttg tggacccaca 60 cctaataatg acaattttgt atcgtccaat catattgcgt gtgacgagct tagttatctg 120 tgccaacttc ttcgggacca agttaagagt gtgggtctat aaaagaattt gaattggcgt 180 tgttctttat gtcagaatgg ttaagcggga cgctccttgg cgctcgatgg cgggtccctc 240 caaggttagt cgcaacgcca attactcccc tcgtggagtt tcgggcccaa gagtgaacaa 300 ggcccaagct tgggtgaaca ggcccatgta taggaagccc atgatctacc ggatgttgag 360 aggccccgat attcctaagg gctgtgaagg tccttgtaag gtccaatctt atgagcagcg 420 acatgacatc tcccatgtcg gcaaggtcat gtgcatatcc gatgtgacgc gtggtaatgg 480 tattacccat cgtgtgggta agcgtttttg tgttaagtct gtgtatatct taggtaagat 540 atggatggac gaaaacatca agttgaagaa ccacacgaac agcgtcatgt tctggttggt 600 cagggaccgt agaccctatg gcacccctat ggactttggc caggtgttta acatgttcga 660 caacgagcct agcacggcta ccgtgaagaa cgatctccgc gatcgttacc aggtcatgca 720 caggttctat gccaaagtca caggtggaca gtacgccagc aacgagcagg cattggttag 780 gcgattctgg aaggtgaaca accacgtggt ctacaaccac caggaagctg gcaagtacga 840 gaaccacacc gagaacgccc ttttattgta tatggcatgt actcatgcgt ctaaccctgt 900 gtatgcaact ctgaagattc ggatctattt ttacgattcg atcatgaatt aataaatttt 960 gaattttatt gaatgatttt ccagtacata atttacatac gttctgtccg tcgcgaatcg 1020 tacagctcta attacattgt taactgaaat cacgcctaac tgatctaaat acaagttgac 1080 taagtgccta aacctagcta aatatgtctg cccagaagct gtcagggaag tcgtccagac 1140 ttggaagttc atgtacgcct tgtggagatc caacgctctc ctcaggttgt ggctgaaccg 1200 tatctggatg tggtatactc tggtcctggt gtacagcggg tcctctaccc tgtacatcct 1260 gaaatagagg ggattttcta tctcccagat atacacgcca ttctccgcct gatgtgcagt 1320 gatgagttcc cctgtgcgtg aatccatgcc cggtacagcc tatgtggaag tagatggagc 1380 acccgcactg taaatcaatc ctgcgtctcc tgattgccct ccttttcttg tattgtctgt 1440 gcgccttctt gatagagggg ggctgtgagg gtgatgaaga ccgcattctt gatggtccag 1500 tttctgagtg atgcgttttc ctctttgtcg aggaaatctt tatagctggc accctcacca 1560 ggattgcaaa gcacgattga tgggattcct cctttaattt gaactggctt gccgtatttg 1620 caatttgact gccagtcctt ctgggccccc agaagttctt tccagtgctt tagctttaga 1680 tagtgcggtg cgacgtcatc aatgacgtta taatccactt cgtttgaata gacccgggca 1740 ttgaagtcca ggtgtccact gagatagtta tgcgggccca atgaacgagc ccacatggtc 1800 tttcccgtcc ttgaatcacc ttcaactatg atactcagtg gtctttctgg ccgcgcagaa 1860 cctcttccaa aataatcatc cgcccactct tgcatgtctt ccggaacgtt agtgaacgag 1920 gagagttgaa acggaggaac ccattgttct ggagcctttg cgaatatcct ttctaagttg 1980 gagcggatgt tatgattctg caggacaaaa tcttttggct gttcttccct taaaaccgcc 2040 atggcagact gaacagagtc tgcatttaac gccttggcat atgaatcatt agcagactgc 2100 ttgcctcctc tagcagatct gccgtcgatc tggaattctc cccattccag tgtatctccg 2160 tccttgtcga tgtaggactt gacgtcggag ctggatttag ctccctgtat gttcggatgg 2220 aaatgtgctg acctggttgg ggagaccaga tcgaagaatc tgttattctt gcactggtat 2280 tttccctcga actgtataag cacatggaga tgaggctccc cattctcatg cagttctctg 2340 cagattttga tgaacttctt gttaactggt gtttctaggt tttgtaattg ggaaagtgcc 2400 tcttcttttg gaagagagca ctgcggataa gtgatgaaat tagtttttgg ctgagatttg 2460 aaacgcttga ctgatggcat tttttgtaat aagaagggag accccaattg agctctctct 2520 aaacttgcta tatgaattgg ggtctggggt ctcatttata ctagaaggct caatagaact 2580 ctcaatctcg ttcgcacacg tgcggccatc cgatataata tt 2622 //