ID   AJ488152; SV 1; linear; mRNA; STD; VRL; 1709 BP.
XX
AC   AJ488152;
XX
DT   23-MAY-2003 (Rel. 75, Created)
DT   23-MAY-2003 (Rel. 75, Last updated, Version 1)
XX
DE   Turnip mosaic virus partial gene for polyprotein, genomic RNA
XX
KW   coat protein; NIb protein; polyprotein.
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1709
RA   Adams M.J.;
RT   ;
RL   Submitted (23-MAY-2002) to the INSDC.
RL   Adams M.J., Plant Pathogen Interactions Division, IACR-Rothamsted,
RL   Harpenden, Herts AL5 2JQ, UNITED KINGDOM.
XX
RN   [2]
RA   Chen J., Chen J., Adams M.J.;
RT   "Characterization of potyviruses from vegetables in China";
RL   Unpublished.
XX
DR   MD5; b7f8f00d75a3d1cfbe215260884409f6.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1709
FT                   /organism="Turnip mosaic virus"
FT                   /host="Brassica juncea"
FT                   /isolate="B5"
FT                   /mol_type="mRNA"
FT                   /country="China:Zhejiang"
FT                   /db_xref="taxon:12230"
FT   CDS             <1..1500
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q7TGA7"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:Q7TGA7"
FT                   /protein_id="CAD32465.1"
FT                   /translation="GNNSGQPSTVVDNTLMVILAVNYSLKKSGIPSELRDSIIRFFVNG
FT                   DDLLLSVHPEYEYILDTMADNFRELGLKYTFDSRTREKGDLWFMSHQGHKREGIWIPKL
FT                   EPERIVSILEWDRSKEPCHRLEAICAAMIESWGYDKLTHEIRKFYAWMIEQAPFSSLAQ
FT                   EGKAPYIAETALRKLYLDKEPAQEDLTHYLQAIFEDYEDGTEACVYHQAGETLDAGLTD
FT                   EQKQAEKEKKEREKAEKERERQKQLALKKGKNVAQEEGERDKEVNAGTSGTFSVPRLKS
FT                   LTSKMRVPRYEQRVALNLDHLILYTPEQTDLSNTRSTRKQFDTWFEGVMADYELTEDKM
FT                   QIILNGLMVWCIENGTSPNINGMWVMMDGDDQVEFPIKPLIDHAKPTFRQIMAHFSDVA
FT                   EAYIEKRNQDRPYMPRYGLQRNLTDMSLARYAFDFYEMTSRTPIRAREAHIQMKAAALR
FT                   GANNNLFGLDGNVGTTVENTERHTTEDVNRNMHNLLGVKGL"
FT   mat_peptide     <1..633
FT                   /product="NIb protein"
FT   mat_peptide     634..1497
FT                   /product="coat protein"
FT   3'UTR           1501..1709
XX
SQ   Sequence 1709 BP; 523 A; 350 C; 449 G; 387 T; 0 other;
     gggaataaca gcggacagcc atcgaccgtt gtagacaaca cgctcatggt catactggca        60
     gtcaactatt cactcaagaa aagtggaatt ccaagtgagt tgcgcgacag catcatcaga       120
     ttcttcgtca acggagatga tttactgcta agcgtacacc cagagtatga gtatatcctt       180
     gacactatgg cagacaactt tcgtgaactg ggcctgaagt atactttcga ctcaaggacc       240
     agggaaaaag gagacctttg gtttatgtcg caccaagggc acaaaagaga gggaatctgg       300
     attcccaagc tcgagccaga gcgaatagta tcaattctag agtgggatcg gtcgaaagag       360
     ccatgccatc gactagaggc aatctgcgca gcgatgattg agtcgtgggg atacgacaag       420
     ttaactcacg agatacgcaa gttttacgcg tggatgattg aacaagctcc atttagctcc       480
     ctagcgcaag aagggaaagc tccttacata gcggaaacgg cgctgaggaa gctctacctc       540
     gataaggaac cagctcaaga ggatctcacc cattatttac aagcaatctt tgaggattat       600
     gaagatggta ctgaggcttg tgtttatcac caggcaggtg agacgcttga tgcaggtttg       660
     acagatgagc aaaagcaggc ggagaaggag aagaaggaga gagagaaggc agaaaaggaa       720
     cgagagaggc agaagcagtt ggcactcaag aaaggcaaga atgttgcaca agaagagggg       780
     gaacgcgaca aggaagtgaa cgctggaacc tctggaactt tcagtgtacc cagacttaag       840
     agtctgacaa gcaagatgcg cgtgccaaga tacgagcaaa gagtggctct aaacctcgat       900
     catctaatcc tatacacgcc ggagcagacg gatctatcca acacacgttc aacgcgaaag       960
     cagtttgaca catggtttga aggtgtaatg gctgattacg aactgacgga ggacaaaatg      1020
     caaatcattc tcaatggttt aatggtctgg tgcattgaga acggaacctc cccgaacata      1080
     aacggaatgt gggtgatgat ggacggcgat gatcaggtgg aattcccgat caaaccgctc      1140
     attgaccacg ccaaacccac atttaggcag ataatggccc atttcagtga cgtagctgaa      1200
     gcgtacattg aaaagcgtaa ccaagaccga ccatacatgc cacgatatgg tcttcagcgc      1260
     aatttaaccg acatgagctt agctcgatac gcgtttgatt tctatgaaat gacttctaga      1320
     actccaatac gtgcgagaga agcacacatc cagatgaaag cagcagcact gcgtggcgca      1380
     aataacaatt tgttcggctt ggatggaaac gttggtacaa cggtagagaa cacggagagg      1440
     catacgaccg aggacgttaa tcggaacatg cataacttac ttggcgttaa ggggttatga      1500
     agttgtatgc tggtagacta taagtattta agtttactcg ttagtattct cgcttatggg      1560
     aaatatgtaa gtttgttaaa gcagccagtg tgactccgtc atgtgtgttg ttgttacttt      1620
     ctatattttc gccgaacatt ttattggtgt tagcgcatgt ggtgaggatc gtcctcgatt      1680
     gccttaacat ttgataggat gcaagggcc                                        1709
//