ID AJ440010; SV 1; linear; genomic RNA; STD; VRL; 4605 BP. XX AC AJ440010; XX DT 27-MAR-2002 (Rel. 71, Created) DT 27-MAR-2002 (Rel. 71, Last updated, Version 1) XX DE Olive leaf yellowing associated virus partial RdRp gene, ORF 1-3 and DE partial ORF4, genomic RNA XX KW heat shock protein 70; heat shock protein 90; hsp70 gene; hsp90 gene; ORF1; KW ORF2; RdRp gene; RNA dependent RNA polymerase. XX OS Olive leaf yellowing-associated virus OC Viruses; Riboviria; Closteroviridae. XX RN [1] RP 1-4605 RA Grieco F.; RT ; RL Submitted (26-MAR-2002) to the INSDC. RL Grieco F., Sezione di Bari, C.N.R. Istituto di Virologia Vegetale, via RL Amendola n.165/A, Bari, Italy, 70126, ITALY. XX RN [2] RA Saponari M.; RT "Partial nucleotide sequence of olive leaf yellowing associated virus RT genomic RNA"; RL Unpublished. XX DR MD5; 11d202255590bff2b0e36be251d46fd5. DR EuropePMC; PMC3889241; 24426308. XX FH Key Location/Qualifiers FH FT source 1..4605 FT /organism="Olive leaf yellowing-associated virus" FT /host="Olea europea" FT /mol_type="genomic RNA" FT /country="Italy:Sicily" FT /db_xref="taxon:82791" FT CDS <1..1014 FT /codon_start=1 FT /gene="RdRp" FT /product="RNA dependent RNA polymerase" FT /db_xref="GOA:Q8QL61" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:Q8QL61" FT /protein_id="CAD29306.1" FT /translation="NAVFGPIFKVLTRRVRQCLLPNIFLYTEMTSDDFSAKLYSLLGGI FT DDYYKGEIDFSKFDKSQDFFCKNYEIKLYSFLGFDSEFLELWSASEYFCRARSIHNDLS FT FTTFAQRRSGTANTFFGNCMITLMMLSLYYDFRNFSAVAVAGDDSILFSKTPIVDHSDH FT MILDNGFEAKFLRDKPAYFCSRFILFANDYIYFVPDPYKVIVKLGKPLTDVTVNGLWER FT YISFKDYTKYLNFETVVWHLAIATNIRYGIEGKNTYSAICALNCIRSNFKRFREVYPGV FT EGVIETTHPVMKKLLSRFYNIISRGFSSDDSWTFDPVPIKEKRMLIFQHQSPEGFG" FT CDS 1345..1917 FT /product="21 kDa protein" FT /note="ORF1" FT /db_xref="InterPro:IPR001938" FT /db_xref="InterPro:IPR037176" FT /db_xref="UniProtKB/TrEMBL:Q8QL60" FT /protein_id="CAD29307.1" FT /translation="MKNFKTYFFLSFSFFFFCSLVATCDLPNLCFYNNDYQLIRVLPKG FT ELWEFEPQGTAQRLTVTNCGVLDLRYGYTLLEFTRKEVVTYFDISLVDGFSTPLSVYCS FT SQPEEVYFSNLCFDTCIFFQGANTCSSPCKINPNIEDCCLPPKYQGSCPSNDWKDTYLN FT STKGVYLQPFDDSFSLHTCEANLVVFF" FT CDS 1917..2105 FT /product="7 kDa protein" FT /note="ORF2" FT /db_xref="GOA:Q8QL59" FT /db_xref="UniProtKB/TrEMBL:Q8QL59" FT /protein_id="CAD29308.1" FT /translation="MWPELRFTLCVLVSTLSFVFLACLILLIVHFSEIIKNALKRLRQQ FT QGFGNTDSQLPFRGAAA" FT CDS 2102..3868 FT /product="putative heat shock protein 70" FT /note="ORF3" FT /db_xref="GOA:Q8QL58" FT /db_xref="InterPro:IPR013126" FT /db_xref="InterPro:IPR018181" FT /db_xref="UniProtKB/TrEMBL:Q8QL58" FT /protein_id="CAD29309.1" FT /translation="MTVLGLDFGTTFSTVCLASSNEVLMLNNDDSEFIPTIIGFSVSDD FT TIVYGYDAITRDGYGRQGFSVYRDLKRWIGVNSKTLSERRAKLKPLYNVTCPGVHFSLR FT IDPTFGQPRLRNLHEIVSFFIALVVRDFEKLRNFRCSGLVISVPSQYTSTQRFFMKTTE FT ERTGLPVFHIMNEPSAALFASMLDMKKTSDWDSYVVYDFGGGTFDTSIVLRYGNYYSVI FT YSCGDDSLGGRDVDEAIRTFLLKRTSLPSTTQLSVSQLKEEVSVTGKPSSILFNGLRLE FT LTFEDLTRLTRPFLERSFIIMNKVIKDSGIRGRLTLVPAGGSSFLPGAVTLAEKAIRAV FT ERVITPKRARSAIAEGCALFSATLSERSVLFVDCINSNITSNKGLYQARIIVAAGSALP FT LKAKLQGNYDDCDLSFTLALYEGTSNRNINNFNLLKKKIESHALGYRSGAWGWIANVEV FT DTSGSIEVRITNKEGAYTMVDSVKHSTFTLITLPSYKPKVKESIKQVVLINDFVAGCYL FT EKSFLKNTSVLTQREYLKFLQNLTTIYEPKVLKTLLVASSFNGTTSIQSYLERRRPVPE FT FLRDPECSVYTR" FT CDS 3777..>4604 FT /product="putative heat shock protein 90" FT /note="ORF4" FT /db_xref="UniProtKB/TrEMBL:Q8QL57" FT /protein_id="CAD29310.1" FT /translation="MALPPYNLTWNEGDLFRSFYGIRNVQSILDEAKLDYERQRTPSFV FT SYLDADFRQYDLIWLLNSRRVPLIARPLFYEYCYLYNYEKKVRKFENLVYELDSTIRDI FT LNTRYLDDLDKELHEFSDDEKFSSLDFNIRDLYRDSYYREQTSDRKKFLRNISICCNRV FT INLERETLSGNTVFPSLPTSQIKLDTTTGDILSWAFRKGRSVIDGLSFTKYHSSGEWFK FT NTINRKKITTNGVGLVDVINDIWSISFLGGLYSIIDYYDVDALSEDSVRVEFLE" XX SQ Sequence 4605 BP; 1217 A; 875 C; 928 G; 1585 T; 0 other; aatgctgttt ttgggccgat ttttaaagtt ttaaccagaa gggttcgtca atgtctttta 60 cccaacattt ttctctatac agagatgaca agtgacgact tctcagcaaa gctttattct 120 ctactcggcg gaatcgatga ctactacaag ggcgaaattg acttctcgaa atttgataaa 180 tctcaagatt tcttttgcaa gaattatgag atcaaattgt actccttttt ggggttcgat 240 tctgaatttc tcgaactttg gagtgcaagt gaatacttct gtcgtgctcg tagtattcac 300 aatgatttat ctttcactac tttcgcgcag agacgaagcg gtacagctaa taccttcttt 360 ggtaactgta tgatcacttt gatgatgctt tctctctact atgacttcag aaatttctct 420 gctgtcgcag ttgctgggga tgactcaatt cttttttcga agactccgat tgtagaccac 480 tctgatcata tgattttgga caatggtttc gaagcgaagt ttttgaggga taaaccggca 540 tatttttgtt cccggtttat tctttttgca aatgactata tttactttgt tcccgacccg 600 tacaaagtca ttgtgaaatt aggtaaacct ttgactgatg tcacagtcaa tggtctttgg 660 gaaagataca ttagtttcaa agattatact aaatacttaa atttcgagac cgttgtatgg 720 catttggcga ttgctaccaa tataaggtat ggcattgaag gaaagaacac ttattcagcc 780 atttgtgcct tgaattgtat tcgatcaaat tttaaaaggt ttcgtgaggt ctatcctggt 840 gttgaagggg tcattgagac gactcatccc gtgatgaaaa agctgctgtc gagattttat 900 aatattatta gtcggggttt ttcgtctgat gattcctgga ctttcgatcc tgttcctatc 960 aaagagaaga ggatgttgat ttttcaacac caaagccccg aaggatttgg gtaaaatttg 1020 agataccaga aaggggactt ctcccttagg attgattttg gtctttcctt tgactttcaa 1080 agcatgaaaa tttaatacag cagactccac aacggattca cggacgtttc atcctgtacc 1140 gttgttcgaa agatatatcg cagatttgat tccggaactg gggatgttgt tgagcgtgag 1200 aagcttaagt ccaaattttg aaatgggcat cggtgtttca tcttgagggt ttttatcact 1260 ctctcaggtc tgagtatgat tgtaatgcct tctaaggaaa agagtcttga gatccatctc 1320 tgacatgatc tcgttttatt taaaatgaag aattttaaga cttacttttt cctctccttc 1380 tctttctttt tcttttgctc tcttgttgcc acttgcgact tgccgaatct ttgtttttac 1440 aataacgact accagttgat aagagtccta ccaaagggtg aactctggga atttgagcct 1500 caaggtacag ctcagcgact cacagtcacc aactgtggtg ttcttgactt gcgttacggg 1560 tacacactcc ttgaatttac tcgtaaagag gtcgtcacct actttgacat ttctttggtc 1620 gacggttttt cgacgccttt gagtgtttat tgttcaagtc aaccggaaga ggtatatttt 1680 tccaatctgt gttttgacac gtgtattttc tttcaaggag cgaatacctg ttccagtcct 1740 tgcaaaatta atccgaatat cgaggattgc tgtcttccac ctaagtatca aggctcttgc 1800 ccttctaatg attggaaaga cacctatctg aattctacta aaggtgttta tttacaacct 1860 tttgatgata gtttttcttt acacacttgt gaggctaatc tagttgtttt cttttgatgt 1920 ggcctgaact acgttttaca ttgtgtgtac ttgtttctac tcttagcttc gtttttcttg 1980 cttgtttaat tttattaatt gtccacttta gtgagatcat taagaacgcc ctcaaacggc 2040 tgaggcagca acaaggcttt gggaatactg attcgcaatt accttttcga ggtgcggcgg 2100 catgacggtt ttgggtcttg actttggtac gaccttctct accgtttgtc ttgcttcttc 2160 taatgaagtc ttgatgttaa ataacgatga tagtgaattc atacctacta tcattggttt 2220 ttccgtttct gatgacacta tagtttatgg atatgatgct atcacacggg acggttacgg 2280 tcgacagggt ttctcagttt atagagacct taaacgttgg ataggagtca actcaaaaac 2340 gctttctgag agacgtgcca aacttaaacc tctgtacaac gtcacttgtc ctggggtaca 2400 cttttcactg aggattgacc ctacttttgg gcagcctcga cttcgtaatc tccacgaaat 2460 cgtctctttc ttcattgcct tagttgtgag ggattttgag aagttaagaa attttcgctg 2520 tagtggttta gttatttccg taccaagtca atacacttct actcaaagat tctttatgaa 2580 gactacggag gaacgtactg gattaccggt ttttcatatc atgaacgagc cttcagccgc 2640 tctcttcgca tcgatgttag atatgaagaa gacttcagat tgggattctt atgtggtata 2700 tgacttcggc ggtggtactt ttgacacttc gatagtctta cgttatggta actactacag 2760 tgttatttac tcctgtggtg atgacagtct cggcggtcga gatgttgatg aagctattag 2820 aacattctta ttaaagcgta cgtctctgcc ttccactaca cagctctccg tttcacaatt 2880 gaaagaagaa gtctctgtca ctggaaaacc gtcatcaata ctttttaacg gcctacgtct 2940 cgaactcacc tttgaagatt tgacaagact gactcgcccc tttttagaac gtagcttcat 3000 tattatgaat aaagttatta aagatagtgg tatccgggga agacttactt tggttccggc 3060 tggtggtagt tcatttctac cgggtgctgt gacacttgct gagaaggcta ttagagctgt 3120 cgaacgggta atcacgccta aacgtgctcg atctgctatt gccgaaggat gtgctctttt 3180 ctctgccact ttatccgaac gtagcgtgct ttttgttgat tgtattaata gtaatattac 3240 ctctaataaa ggtctctatc aagctcgtat tatagtcgct gccggatccg ctttaccatt 3300 gaaagctaaa cttcagggta attatgatga ctgtgactta tctttcactc tagctttata 3360 cgaaggtact tctaatcgta atatcaacaa cttcaatctc cttaagaaga agatagaaag 3420 tcatgctctt ggctaccgat ccggtgcttg gggctggatt gctaatgtcg aggtcgacac 3480 ttctggtagt attgaagtga ggattactaa caaagaaggt gcttatacca tggttgactc 3540 agttaaacat agcaccttca ctctgatcac attaccttcg tataaaccca aagttaaaga 3600 gtcgattaaa caagtagtac ttatcaatga ttttgttgct ggttgttatc tcgagaagtc 3660 cttccttaaa aatacttctg ttttgactca gagagaatat ctaaaatttt tacaaaatct 3720 aaccactatc tacgaaccta aagttctaaa gacgttactt gtagcctctt ccttcaatgg 3780 cactacctcc atacaatctt acttggaacg aaggcgacct gttccggagt ttttacggga 3840 tccggaatgt tcagtctata ctagatgaag cgaagttaga ttacgaacgt caacgtacac 3900 caagttttgt ttcgtacctt gacgccgatt ttcgacaata tgatttgatt tggttgctta 3960 attctagacg tgttccgctg attgcgagac ctctttttta tgagtattgt tacttatata 4020 actacgaaaa gaaagttcgg aaatttgaga atttagttta cgaactcgac tccaccatcc 4080 gtgatatctt aaacaccagg tatttagacg atctcgataa agaacttcat gaattttctg 4140 atgatgagaa gttttcttcg ttagatttta atataaggga tctttatcgt gattcttact 4200 atagagaaca gacttcagat cgtaaaaagt tcctgaggaa tatttctata tgttgtaaca 4260 gggtcattaa tttagaaaga gagactttga gcggtaatac tgtttttcca agtcttccta 4320 cctctcaaat aaaattagac accacgacgg gagatatctt atcttgggct tttcgcaaag 4380 ggagatccgt cattgatggt ttatcgttca cgaagtatca ctcttctggt gagtggttta 4440 aaaatactat aaatagaaaa aaaatcacta ctaatggtgt tggtctagta gatgttatca 4500 acgatatttg gtcaatttcg ttcttgggag gtctttactc tattattgat tattatgatg 4560 ttgatgcgtt atcagaagac agtgttagag tggaattttt agaaa 4605 //