ID   AJ429093; SV 1; linear; genomic RNA; STD; VRL; 827 BP.
XX
AC   AJ429093;
XX
DT   29-JAN-2003 (Rel. 74, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 3)
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DE   Odontoglossum ringspot virus cp gene for capsid protein, genomic RNA,
DE   isolate 2243a
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KW   capsid protein; cp gene.
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OS   Odontoglossum ringspot virus
OC   Viruses; Riboviria; Virgaviridae; Tobamovirus.
XX
RN   [1]
RP   1-827
RA   Willingmann P.;
RT   ;
RL   Submitted (28-JAN-2002) to the INSDC.
RL   Willingmann P., Abteilung Pflanzenschutz, Institut fuer Angewandte Botanik,
RL   Ohnhorststr.18, 22609 Hamburg, GERMANY.
XX
RN   [2]
RX   DOI; 10.1016/S0166-0934(02)00135-0.
RX   PUBMED; 12367724.
RA   Letschert B., Adam G., Lesemann D.E., Willingmann P., Heinze C.;
RT   "Detection and differentiation of serologically cross-reacting
RT   tobamoviruses of economical importance by RT-PCR and RT-PCR-RFLP";
RL   J. Virol. Methods 106(1):1-10(2002).
XX
DR   MD5; 7bf34f5f1bb2678956a4777377a312b1.
DR   RFAM; RF01083; UPD-PK2.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..827
FT                   /organism="Odontoglossum ringspot virus"
FT                   /isolate="2243a"
FT                   /mol_type="genomic RNA"
FT                   /country="Germany"
FT                   /db_xref="taxon:12238"
FT   CDS             267..743
FT                   /gene="cp"
FT                   /product="capsid protein"
FT                   /db_xref="GOA:Q80P28"
FT                   /db_xref="InterPro:IPR001337"
FT                   /db_xref="InterPro:IPR036417"
FT                   /db_xref="UniProtKB/TrEMBL:Q80P28"
FT                   /protein_id="CAD22090.1"
FT                   /translation="MSYTITDPSKLAYLSSAWADPNSLINLCTNSLGYQFQTQQARTTV
FT                   QQQFADVWQPVPTLTSRFPAGAGYFRVYRYDPILDPLITFLMGTFDTRNRIIEVENPQN
FT                   PTTTETLDATRRVDDATVAIRSAINNLLNELVRGTGMYNQVSFETMSGLTWTSS"
XX
SQ   Sequence 827 BP; 240 A; 144 C; 171 G; 272 T; 0 other;
     gtcgttgatg agttcatgga gaaagttcct atggctgcta ggctcaagtc ttttcgctct        60
     gtcaacaaaa agaaacctag taacagttct aagtttgtta atggaaaatc tagacttaat       120
     agtcgtaata gattaaatta tgaaaatggt gatagtgatg ttggtattag tgttgtagat       180
     gatattgtgg ttggtaatgg tgttagtgat attcgtattg atgatgattg tgagtcattt       240
     gacgctcaat ctgattcgta ttgaatatgt cttacactat tacagacccg tctaagctgg       300
     cttatttaag ctcggcttgg gctgacccca attcactaat caacctttgt accaattctc       360
     tgggttatca gttccaaaca caacaagctc gaacaactgt tcaacagcag tttgctgatg       420
     tttggcagcc ggttcctact ttgaccagta ggttccctgc aggcgctggt tacttcagag       480
     tttatcgcta tgatcctata ttagatcctt taataacttt cttaatgggt acttttgata       540
     ctcgtaatag aataatcgag gtagaaaatc cgcagaatcc gacaactacg gaaacattag       600
     atgcaactcg tagagttgat gatgcaactg tagcaataag atctgcaata aataatctat       660
     taaatgagtt agttagggga actggtatgt acaatcaagt ctcatttgag acgatgtctg       720
     gacttacttg gacctcttcc taatcatatt taggaaaata acgttgatag tgttgaacta       780
     tccgtggtgc atacgataat gcatagtgct tttccctcca cttaaat                     827
//