ID AJ427910; SV 1; circular; genomic DNA; STD; VRL; 2781 BP. XX AC AJ427910; XX DT 16-JAN-2002 (Rel. 70, Created) DT 15-APR-2005 (Rel. 83, Last updated, Version 3) XX DE African cassava mosaic virus-[Nigeria-Ogo] AC1 gene, AC2 gene, AC3 gene, DE AC4 gene, AV2 gene and AV1 gene XX KW AC1 gene; AC2 gene; AC4 gene; AV1 gene; AV2 gene; coat protein; KW replication enhancer protein; replication-associated protein; KW transcriptional activator protein: AC3 gene. XX OS African cassava mosaic virus-[Nigeria-Ogo] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2781 RA Briddon R.W.; RT ; RL Submitted (12-JAN-2002) to the INSDC. RL Briddon R.W., Department of Disease and Stress Biology, John Innes Centre, RL Colney Lane, Norwich, Norfolk, NR4 7UH, UNITED KINGDOM. XX DR MD5; cece38e37e72e38a094b40c12c2f7346. DR EuropePMC; PMC1079959; 15784145. DR EuropePMC; PMC2698514; 19369323. DR EuropePMC; PMC3163225; 21812981. DR EuropePMC; PMC4974525; 27399762. DR EuropePMC; PMC5180216; 28008997. DR EuropePMC; PMC5222796; 28119675. DR EuropePMC; PMC6482539; 31018865. XX FH Key Location/Qualifiers FH FT source 1..2781 FT /organism="African cassava mosaic virus-[Nigeria-Ogo]" FT /host="Manihot esculenta" FT /lab_host="Nicotiana benthamiana" FT /isolate="Ogoroco" FT /mol_type="genomic DNA" FT /country="Nigeria" FT /clone="APA9" FT /db_xref="taxon:222074" FT CDS 136..477 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:Q8V6Z8" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q8V6Z8" FT /protein_id="CAD20823.1" FT /translation="MWDPLVNEFPDSVHGLRCMLAIKYLQALEDTYEPSTLGHDLVRDL FT VSVIRARNYVEATRRYHHFHSRLEGSSKAELRQPIQEPCYCPHCPRHKSKTGLDKQAHV FT QKAHNVQDV" FT CDS 296..1072 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:Q8V6Z7" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q8V6Z7" FT /protein_id="CAD20824.1" FT /translation="MSKRPGDIIISTPGSKVRRRLNFDSPYRNRATAPTVHVTNRKRAW FT INRPMYRKPTMYRMYRSPDIPRGCEGPCKVQSYEQRDDVKHLGICKVISDVTRGPGLTH FT RVGKRFCIKSIYILGKIWMDENIKKQNHTNNVMFYLLRDRRPYGNAPQDFGQIFNMFDN FT EPSTATIKNDLRDRFQVLRKFHATVIGGPSGMKEQALVKRFYRLNHHVTYNHQEAGKYE FT NHTENALLLYMACTHASNPVYATLKIRIYFYDSIGN" FT CDS complement(1069..1473) FT /gene="AC3" FT /product="replication enhancer protein" FT /db_xref="GOA:Q8V6Z6" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q8V6Z6" FT /protein_id="CAD20825.1" FT /translation="MDLRTGELITAPQAMNGVYTWEINNPLYFTITRHQQRPFLLNQDI FT ITVQVRFNHNLRKELGIHKCFLNFRIWTTLRPQTGLFLRVFRYQVLKYLDNIGVISIND FT VIRAADHVLFNVIAKTIECQLTHEIKFNVY" FT CDS complement(1214..1621) FT /gene="AC2" FT /product="transcriptional activator protein" FT /db_xref="GOA:Q8V6Z5" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q8V6Z5" FT /protein_id="CAD20826.1" FT /translation="MQSSSPSQNHSTQVPIKVSHRQFKKRAIRRRRVDLVCGCSYYLHI FT NCSNHGFTHRGTHHCSSSNEWRVYLGNKQSPVFHNHQAPTTTIPAEPGHHNSPGSIQSQ FT PEEGAGDSQMFSQLQDLDDLTASDWSFLKGL" FT CDS complement(1530..2606) FT /gene="AC1" FT /product="replication-associated protein" FT /db_xref="GOA:Q8V6Z4" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q8V6Z4" FT /protein_id="CAD20827.1" FT /translation="MRTPRFRVQAKNVFLTYPKCSIPKEHQLSFIQTLSLPSNPKFIKI FT CRELHQNGEPHLHALIQFEGKITITNNRLFDCVHPTCSTNFHPNIQGAKSSSDVKSYLD FT KDGDTVEWGQFQIDGRSARGGQQSANDAYAKGLNSGSKSEALNVIRELVPKDFVLQFHN FT LNSNLDRIFQEPPAPYVSPFPCSSFDQVPVEIEEWVADNVRDSAARPWRPNSIVIEGAS FT RTGKTIWARSLGPHNYLCGHLDLSPKVFNNAAWYNVIDDVDPHYLKHFKEFMGSQRDWQ FT SNTKYGKPVQIKGGIPTIFLCNPGPTSSYKEFLDEEKQEALKAWALKNAIFITLTEPLY FT SGSNQSQSQTIQEASHPA" FT CDS complement(2150..2701) FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q8V6Z3" FT /protein_id="CAD20828.1" FT /translation="MPFRDTYIMSPINRRRCSRVSLVECLQLTWSTCELRVLEFKPRMS FT FSHTQSVLYPKNTSCHSFKHYLSHQTLSSLKSVESCIRMGNLTCMPSSNSRGKSRLRTI FT VSSIVYTQPVAPISTPTFKVPNQAQMSSPIWIRTETPSNGDNFRSMDDLLEAVNNQRMM FT LTPKALTAAVSQKLLMSLGN" XX SQ Sequence 2781 BP; 751 A; 557 C; 679 G; 794 T; 0 other; accggttggc cccgcccccc tttaaacgtg gtccccgcgc actacttatg tcggccaatc 60 atgctgtagc tttaaaggtt atgtattagt ggtggaccac tatatactta caggcgaagt 120 tgttgctagt gcgcaatgtg ggatccactg gtgaatgagt ttccagactc ggtgcatggg 180 cttaggtgta tgcttgcaat taaatatttg caggccttag aggatacata cgagcccagt 240 actttgggcc acgatttggt tagagatcta gtctcagtta tcagggctcg taattatgtc 300 gaagcgacca ggagatatca tcatttccac tccaggctcg aaggttcgtc gaaggctgaa 360 cttcgacagc ccatacagga accgtgctac tgcccccact gtccacgtca caaatcgaaa 420 acgggcctgg ataaacaggc ccatgtacag aaagcccaca atgtacagga tgtatagaag 480 cccagacata cctaggggct gtgaaggccc atgtaaggtc cagtcgtatg agcagaggga 540 tgatgtgaag caccttggta tctgtaaggt gattagtgat gtgacacgtg ggcctgggct 600 gacacacagg gtcggaaaga ggttttgtat caagtccatt tacatacttg gtaagatctg 660 gatggatgaa aatattaaga agcaaaatca cacgaataat gtgatgtttt atctgcttag 720 ggatagaagg ccttatggca atgcgcccca agactttggg cagatattta atatgtttga 780 taatgagccc agtactgcaa caattaagaa cgatttgagg gataggtttc aggtattgag 840 gaaatttcat gccactgtta ttggtggtcc atctggcatg aaggagcagg ctttggttaa 900 aaggttttac aggttgaatc atcacgtgac atataatcat caggaggcag ggaagtatga 960 gaatcacaca gagaatgctt tgcttctgta catggcatgt actcatgcct ccaatcctgt 1020 atatgctacg ttgaaaatac gtatatactt ctatgacagt attggcaatt aataaacatt 1080 gaattttatt tcatgagtca actgacactc aatagttttg gcaattacat tgaacaaaac 1140 atgatcagca gctctaatga catcgttaat tgagataaca cctatattat ccaagtattt 1200 aagtacttgg tatctaaaga cccttaagaa aagaccagtc tgaggccgta aggtcgtcca 1260 gatcctgaag ttgagaaaac atttgtgaat ccccagctcc ttcctcaggt tgtgattgaa 1320 tcgaacctgg actgttatga tgtcctggtt cagcaggaat ggtcgttgtt ggtgcctggt 1380 gattgtgaaa tacaggggat tgtttatttc ccaggtatac acgccattca ttgcttgagg 1440 agcagtgatg agttcccctg tgcgtaaatc catgattgga gcagttgata tggaggtaat 1500 atgaacagcc acagacaaga tccactctcc tacgccggat ggctcgcttc ttgaattgtc 1560 tgtgactgac tttgattgga acctgagtag agtggttctg tgagggtgat gaagattgca 1620 ttctttaatg cccaggcctt tagcgcttct tgcttttcct cgtctaggaa ctctttatag 1680 gacgaggtag gtcctggatt gcagaggaag atagtgggaa tgccaccttt aatttgaacg 1740 ggtttcccgt atttcgtgtt ggactgccag tccctctggg accccatgaa ttctttaaag 1800 tgctttaggt agtggggatc gacgtcatca atgacgttgt accaggcagc attattgaag 1860 acctttggac taaggtccag gtgtccacac aggtaattgt gtgggcctaa agatctggcc 1920 catatcgtct tccctgttct gctagcacct tctattacaa tactattggg tctccatggc 1980 cgcgcagcgg aatccctaac attatcagcg acccattctt caatttcaac aggaacttgg 2040 tcaaaggaag aacatgggaa gggagaaaca taaggagctg gtggctcctg gaaaatccta 2100 tctaaattac tattgagatt atgaaattga agtacaaagt cctttgggac taattcccta 2160 atgacattaa gagcttctga cttactgccg ctgttaaggc ctttggcgta agcatcattc 2220 gctgattgtt gaccgcctct agcagatcgt ccatcgatct gaaattgtcc ccattcgacg 2280 gtgtctccgt ccttatccag ataggacttg acatctgagc ttgatttggc accttgaatg 2340 ttggggtgga aattggtgct acaggttggg tgtacacaat cgaagagacg attgttcgta 2400 atcgtgattt tcccctcgaa ttggatgagg gcatgcaagt gaggttcccc attctgatgc 2460 agctctctac agattttaat gaacttaggg tttgatggga gagatagtgt ttgaatgaat 2520 gacagctggt gttctttggg tatagaacac tttgggtatg tgagaaagac attcttggct 2580 tgaactctaa aacgcggagt tcgcatgttg accaagtcaa ttggagacac tcaactagag 2640 acactcttga gcatctcctc ctgttaattg gagacattat ataggtgtct ctaaatggca 2700 ttcttgtaat aagttgaact ttaatttgaa ttaaaaggct caaaaggcgc agaacaccca 2760 aggggccaac cgtataatat t 2781 //